Os05g0241900
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Contents
Annotated Information
Function
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Expression
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Evolution
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Structured Information
| Gene Name |
Os05g0241900 |
|---|---|
| Description |
Retrotransposon gag protein family protein |
| Version |
NM_001061538.2 GI:297604111 GeneID:4338193 |
| Length |
5113 bp |
| Definition |
Oryza sativa Japonica Group Os05g0241900, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 5:8644290..8649402 |
| Sequence Coding Region |
8644290..8644388,8647441..8648344,8648367..8648901,8649204..8649402 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008398:8644290..8649402 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008398:8644290..8649402 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atggcggcactgaagaaggaggtggccgatctcaaaggtctgaagggggaagtaaaagagattaaaggattgttactggaattgtgcaagagaaaagaggctgaagaagaagaagaagcggctgctactgcaaaggcaagcaaggcagtagcttcgcaaggaggaggagacgcggctgggacaagttctcaggcgcaaggagtgaggatgttggaccaacagaggaacatttatctgggtcaggcaggagaagggaatcagtacgctgaggctgtcctcaaggggccaagattagaaatccctctgttcagtggagaagatccaatagattggcttaagcagtgtgagaagttttttgagattacgggtacccctctggatcaatgggtgaatttagcggtggctcatttgaatggcagggcattgaaatggttcggaggaattggtctgccatggcaagtgatagcttggccacaatggtgcagcatggtctgtactcgattttctgctgcgagtgaacatgaggcaattgagttgttccaaaatgtgaaacaatttggaacaacagtggagcaatatattgacaagtttgaggattatgtggatttagtaaagagagaccacccttatctccaggagcaatatctgaccagctgtttcattgggggattgagagcagatattaaatacgatgtgtgtggtcagaaacctcaaggcttgcttgaaacttactgggctgctaatgccagaaaaatggtgggaaatttcaaccgaaacaggaatcagaatccacttggaggtaatcaggggcggaatgctaaccataggggacaaaacagaggtgagggagataggagagaggaaaagaagtgctggttctgtaaagaaccttggtttccaaggcaccagtgtaagattaaacaagcaattcacgctttgttagaagaagatgatgggcaagaagataaagaaacaagtaatactgggggtgatgaggaagagaagaaagaaactgaagaatctgcaacttcagaaaatgagtccccaaccgaagagttgatgtacatttctcaaactgcagtacagggtacatccaggccagatacattctcagtattaatcaaaatcaatggccggacagctgtagggttggttgatagtgggagtaccaccacattcatggatcaggattatgcccttaggaattactatcccttgaaaaatactgacacaaagaaagtagtagttgctggtggtggagaacttaagactgatgtcatggtgccagacatcagctatgagattcaaggagaatgctttactaaccaatttaagttgcttcctctcaagggatatgatattatcttgggtgctgattggatctataattatagtcccatttcgctggatttgaagcaaagaattttgggaattacaaagggaaacaaagtaatactcttacaagatttcactaaaccaaataagcactttcagatcagtggtaaaagattggagaaaatgttaaagaagggggctcttggtatggtgatacaagtcaatgtcatgtctgaaactgtggaggaagaagggcatgttatacctgaagacattagtgacattatacaacaatttccagcttggcaaagaccactttggaatccttatgtactcctattaaaactattggcttgtggccaggagggagataagaaaaacctcattatcatttgttcttag</cdnaseq> |
| Protein Sequence |
<aaseq>MAALKKEVADLKGLKGEVKEIKGLLLELCKRKEAEEEEEAAATA KASKAVASQGGGDAAGTSSQAQGVRMLDQQRNIYLGQAGEGNQYAEAVLKGPRLEIPL FSGEDPIDWLKQCEKFFEITGTPLDQWVNLAVAHLNGRALKWFGGIGLPWQVIAWPQW CSMVCTRFSAASEHEAIELFQNVKQFGTTVEQYIDKFEDYVDLVKRDHPYLQEQYLTS CFIGGLRADIKYDVCGQKPQGLLETYWAANARKMVGNFNRNRNQNPLGGNQGRNANHR GQNRGEGDRREEKKCWFCKEPWFPRHQCKIKQAIHALLEEDDGQEDKETSNTGGDEEE KKETEESATSENESPTEELMYISQTAVQGTSRPDTFSVLIKINGRTAVGLVDSGSTTT FMDQDYALRNYYPLKNTDTKKVVVAGGGELKTDVMVPDISYEIQGECFTNQFKLLPLK GYDIILGADWIYNYSPISLDLKQRILGITKGNKVILLQDFTKPNKHFQISGKRLEKML KKGALGMVIQVNVMSETVEEEGHVIPEDISDIIQQFPAWQRPLWNPYVLLLKLLACGQ EGDKKNLIIICS</aaseq> |
| Gene Sequence |
<dnaseqindica>5015..5113#1059..1962#502..1036#1..199#atggcggcactgaagaaggaggtggccgatctcaaaggtctgaagggggaagtaaaagagattaaaggattgttactggaattgtgcaagagaaaagaggctgaagaagaagaagaagcggctgctactgcaaaggcaagcaaggcagtagcttcgcaaggaggaggagacgcggctgggacaagttctcaggcgcaaggtaacccacctgtgactgaatcccaattccatattgaagctaatactgtgaacccctcgatgcctatgaatatgcattcagttgcacctacgatgcctatgatgacagtacaagggcatcccacacagccagggcatgagaatcagtttgctgctaatcgaaccaatgagatgtttacctcctctatagtaactgctactcgaccacagctcgcatttgaaatacccgggggcacattccagcttttcagcctaatgggaatagggttggtggacatgcagactttgtccaaaatcgtgcaggagtgaggatgttggaccaacagaggaacatttatctgggtcaggcaggagaagggaatcagtacgctgaggctgtcctcaaggggccaagattagaaatccctctgttcagtggagaagatccaatagattggcttaagcagtgtgagaagttttttgagattacgggtacccctctggatcaatgggtgaatttagcggtggctcatttgaatggcagggcattgaaatggttcggaggaattggtctgccatggcaagtgatagcttggccacaatggtgcagcatggtctgtactcgattttctgctgcgagtgaacatgaggcaattgagttgttccaaaatgtgaaacaatttggaacaacagtggagcaatatattgacaagtttgaggattatgtggatttagtaaagagagaccacccttatctccaggagcaatatctgaccagctgtttcattgggggattgagagcagatattaaatacgatgtgtgtggtcagaaacctcaaggcttgcttgaaacttactggtatgcaaaaaaattatgaaagggctgctaatgccagaaaaatggtgggaaatttcaaccgaaacaggaatcagaatccacttggaggtaatcaggggcggaatgctaaccataggggacaaaacagaggtgagggagataggagagaggaaaagaagtgctggttctgtaaagaaccttggtttccaaggcaccagtgtaagattaaacaagcaattcacgctttgttagaagaagatgatgggcaagaagataaagaaacaagtaatactgggggtgatgaggaagagaagaaagaaactgaagaatctgcaacttcagaaaatgagtccccaaccgaagagttgatgtacatttctcaaactgcagtacagggtacatccaggccagatacattctcagtattaatcaaaatcaatggccggacagctgtagggttggttgatagtgggagtaccaccacattcatggatcaggattatgcccttaggaattactatcccttgaaaaatactgacacaaagaaagtagtagttgctggtggtggagaacttaagactgatgtcatggtgccagacatcagctatgagattcaaggagaatgctttactaaccaatttaagttgcttcctctcaagggatatgatattatcttgggtgctgattggatctataattatagtcccatttcgctggatttgaagcaaagaattttgggaattacaaagggaaacaaagtaatactcttacaagatttcactaaaccaaataagcactttcagatcagtggtaaaagattggagaaaatgttaaagaagggggctcttggtatggtgatacaagtcaatgtcatgtctgaaactgtggaggaagaagggcatgttatacctgaagacattagtgacattatacaacaatttccagctgtgcttaaagaaccaaaggggctaccacctaagcgagaatgtgaccatgtgattaatttacagagtggggctgtaccacctaacatcaggccatacagagtgccacattatcagaaggaagcgatggaaaatattatcaatgagctgattgaatctaaggagattcaaactagtgatagtccctattcatctcctgctgtgatggttcgcaagaaagatggatcttggaggatgtgtgtcgattaccgacaattgaatgcacagactgttaagaacaaattcccaatgccaatcattgaagacttgttagatgaattaaatggagcaaggatattctctaaactagaccttcggtcagggtatcaccaaattaggatggctgagaaggatgttcataaaacagcatttagaacacatcttgggcattatgaatatcaagtaatgccattcggtttgacaaatgaccctgccactttccagtcacttatgaatcatgtcctagcaccattcttaagaagatttgtgttggtgtttttcgatgacatattaatctatagcaaaacaagggcagagcatctggagcatgtgaagttagtaatgcaagctttgcaagacaaccatcttgtaatcaagcttaaaaagtgtgcttttggacttgcaagtgtgtcttacctaggacatgtaatctctcaggatggggtggctacagatcccaagaaggtggggaaaattaaaaattggcccacacccaaggatgtcactgatgtaaggaaattcctggggatgacaggatactaccgaaggttcattcaaggctatggtaccatttgtagacctattcatgacatgctgaaaaagaatgggtttcaatggggagcagatcagaccacagcttttgagactctaaagcataagctgagaaccagccctgtcttggctttgccagactttgatcaagcattcaccatagaagcagatgcttgtggagtcggcattggggcagtactaatgcagggagggcgacccattgcatttttcagtaaggctttgggacccaaggcagctgggcaatccatatatgagaaggaggctatggctattcttgaagctcttaaaaagtggaggcactatgtgttgggcagtaaattgatcattaagactgaccagcaaagtttgaaattcatgatgggtcagagattggtagaggggatacaacacaaattgttgctaaaattgatggagtatgattataccatagagtataaatctggaaaagaaaatttagtggctgatgctctgtccaggctaccacaaaaggaagctgttgcagacaggtgtcacccaatgactgtggtgatacctgagtggattgtggatattcagaggagctatgaaaatgatgtacaagcacacaaaattctcagtttgattggtactgcagcagatccagatagagaatataagcttgaagcaggattgctaaaatacaaagggaggatctatgtgggagaagccacggatatcagaaggcaattgatcacaacctatcattcatcttcttttgggggtcactcaggtatgagagcaacccaccaccgaatcaaaatgttgttttattggcatgggatgagaggggaagttgaaagattcataagagagtgtcctacttgccagatcactaagtctgaacatgttcacattcctgggttgctcaatccattagaaataccagatatggcatggactcatattactatggactttatagaggggctaccaaaatcacaagggaaagatgttattctggtagtggtggatcgtctgaccaaatatgctcatttcatagcattagcccatccatatgatgtggagcaggtggtagaggcgttcatgaacaatattcacaaactgcatggtatgccgatggtcatcatcactgacagggaccggatttttactagcagtctgtttcaggagattttcaaagcaatgaaggtcaagctgagatttagtactgcttatcacccacaaatggatggacaaactgaaagagtcaatcaatgcctggagtcctaccttagaaatatgacgttccaagaacctcacaaatggtattcatggctggcactagctgagtggtggtataacaccactttccacaccgcaattcagatgactccgttcaaagcaatgtatggttattctcccccacaaatcaatgaattttcagtgccatgtaacatatcagaagaagctagggtgactattgaagaaaaggaagcaatactgaacaaactcaagaatagtttggctgatgctcaacaccgaatgaagtattttgcagataaaaatagaactgaaagaaacttagaagttggggatatggtatatttaaaattgaaaccctatagacagtctgcatttgggatcagagggtctctcaagctaagatccaagttttatggaccattcaaggttcttcagaagattggccaattagcttataagcttcagttacctgatgatgctcagatccaccctgtgttccatgttagtcagctcaagaagcatctggggaagcatgctattcccatgtccaatttaccctcagtaggaccagatgggcagattaaaacagaaccactagcagttctacagaggagaatggtacccaggaaaggagttgctgtgactcaatggttgatattatggcagaatttgtctcctgctgaagccacatgggaagacgcatcagtcattcaagcaatgtttccatcgtttaatccttgaggacaaggattgtcttgaggggaaggtaatgtcaggattgagaggaattctgagatttcagaaatattctaagtctgaaaacctgaagatgcagtttgaagtctgaagatgatgtgcgaacgggaggaagcagagttatgaagatccaacggtctgcagtgattccgaagaggtatcgcaggatcctaaccattcacatgttgtcggggaccactgtagtggtaaattgttgttttctctgaattggtgtgtgtgtgttcagtggcaaagaccactttggaatccttatgtactcctattaaaactattggcttgtggccaggagggagataagaaaaacctcattatcatttgttcttag</dnaseqindica> 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