Os08g0101000
Please input one-sentence summary here.
Contents
Annotated Information
Function
Please input function information here. Transcription factor IDEF1 early response to iron deficiency in rice necessary to express the late vegetative stage embryos while rich protein gene induction. Higher plants by regulating the expression of genes related to iron to maintain the plants get iron homeostasis of body iron content. IDEF1 to adjust the response of rice to iron deficiency by identifying the response CATGC sequence cis-elements IDE1. Medium to induce the expression of iron-deficiency treatment IDEF and suppress the expression of the two types of transgenic plants was found, and induce the expression of plant IDEF1 compared to suppress the expression of plant IDEF1 early iron deficiency is very sensitive.
Expression
Please input expression information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this gene
Please input related labs here.
References
Please input cited references here.
Structured Information
| Gene Name |
Os08g0101000 |
|---|---|
| Description |
Transcriptional factor B3 family protein |
| Version |
NM_001067292.1 GI:115474320 GeneID:4344415 |
| Length |
3946 bp |
| Definition |
Oryza sativa Japonica Group Os08g0101000, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 8:62575..66520 |
| Sequence Coding Region |
63028..63075,63607..63683,63765..63811,64155..64255,64363..64455 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008401:62575..66520 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008401:62575..66520 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atggggcaaatggacggcggcgacggcggcggcggcggccacccctaccactaccaggctctcctggccgccgtccaccagcagaccgtcccctttcccaatcccttccccgccccctcctccggagccgagcccccccacccgcacaaccacaaccacaaccacaatcacaaccacaatattcacaattctcacaatcacaaccacaatcacaatgctgctcctcacccttgtcacactcccactcccactcccactcccagaggtttcgccgactggagcgcctccaccagcgccttcacctcccttgccgcgcactcttctactgcccccagcaatgccgttcactacagcttctccccctgctatgccttctggacacattacatgctcaacaagaacgcctaccccacctccttccctgcgccacacgacgaccacctgcgccttgccaacaacaatcatcctagagacgcaccaggtcctgcatccagctacggggtcgagtcttttacttcaccgtccatggcaccgaatatttgcacccacatgcctcccatagaaggacccatatctgccaaggaagataagaaaccagagattttgcctagagtggttaagagcagtgatgaattggaaaccagaaacagcaatgttgaatttcactctgagacagttggtactctccctgagtcgaagcaaggccatgacagtcgtgctactaaactactcaactcgggagaataccaagtcattctgcgcaaggagctgacaaagagtgatgttggaaatgttggaagaattgtgctacccaagaaggatgcagaggctagtcttccacctttgttgcaaagggatcctttgatactgcacatggacgacatggtgctcccagtgacatggaagtttaagtacaggtactggccaaataacaaaagcagaatgtacattctggattctgcaggtgaatttctgaagacacatggtcttcaggctggggatgtcatcattatctacaaaaacttggctcctggcaaatttattatccgaggagagaaggccattcatcagcagacaacaaatccctag</cdnaseq> |
| Protein Sequence |
<aaseq>MGQMDGGDGGGGGHPYHYQALLAAVHQQTVPFPNPFPAPSSGAE PPHPHNHNHNHNHNHNIHNSHNHNHNHNAAPHPCHTPTPTPTPRGFADWSASTSAFTS LAAHSSTAPSNAVHYSFSPCYAFWTHYMLNKNAYPTSFPAPHDDHLRLANNNHPRDAP GPASSYGVESFTSPSMAPNICTHMPPIEGPISAKEDKKPEILPRVVKSSDELETRNSN VEFHSETVGTLPESKQGHDSRATKLLNSGEYQVILRKELTKSDVGNVGRIVLPKKDAE ASLPPLLQRDPLILHMDDMVLPVTWKFKYRYWPNNKSRMYILDSAGEFLKTHGLQAGD VIIIYKNLAPGKFIIRGEKAIHQQTTNP</aaseq> |
| Gene Sequence |
<dnaseqindica>3446..3493#2838..2914#2710..2756#2266..2366#2066..2158#1634..1756#1419..1537#664..1020#163..286#ctcttcttcctcctcctggggcctagccgcctaggggggttgtggcctgcgactgcgacttcttcctctgccttctgctctctgcctctgagtatatggaatatggtgtgtgcgtgaagagaaattaagtgagggaggggaaagcgagcgaacagggcaacaatggggcaaatggacggcggcgacggcggcggcggcggccacccctaccactaccaggctctcctggccgccgtccaccagcagaccgtcccctttcccaatcccttccccgccccctcctccggtactctctctctctctctctacaccttcttctttcttacctcaaggaatgttagggcagcaggtaggcaggcagaccaccaaaattcagatctttttctttatctattactactatactatactattattaaaaaggaacaagagaatcttgaggtccttgtttaccatttattaatctagagatcccctcccctcccctcccctcccctccgcttctgcttgattgatttcattttgggtctactcctactatgtatgtattgtatttagggtgatcaatcattcctcactctgtctattcaattcattcacttcacttaattggcccatctatgtatgtatgtaaatgtaattgaccatgtgcttggattgcaggagccgagcccccccacccgcacaaccacaaccacaaccacaatcacaaccacaatattcacaattctcacaatcacaaccacaatcacaatgctgctcctcacccttgtcacactcccactcccactcccactcccagaggtttcgccgactggagcgcctccaccagcgccttcacctcccttgccgcgcactcttctactgcccccagcaatgccgttcactacagcttctccccctgctatgccttctggacacattacatgctcaacaagaacgcctaccccacctccttccctgcgccacacgacgaccacctgcgccttgccaacaacaatcatcctagagacgcaccaggtacgttaaaagctatctcctttccaactaaaccagcatgtactgcattgcctttttttccttttccttttaaagcaataaccaaaattaatcttccgttgcgttgttcagagctacagatgttgcttgtaacaactaggaatttttaccgacctagctcattttaattattcatgtgcctctgatgttgaacaagtaggtccatgaggcatttacattattcctctccatgcttccatcaatatgggtagtacatctaagctactgtattccactttggcattagctaatagccaggttttctcagtcatgtacatatggggcagctatttgcgtcccgccaaattctttcacccagccatcctcacttttttccacatatcctgttttaattacaggtcctgcatccagctacggggtcgagtcttttacttcaccgtccatggcaccgaatatttgcacccacatgcctcccatagaaggacccatatctgccaaggaagataagaaaccagaggtatatacatcagaacattcaagatttggaaaacccttccagttttcatcatcctccataacacataatctaactaccgtaatggatgctaaccagattttgcctagagtggttaagagcagtgatgaattggaaaccagaaacagcaatgttgaatttcactctgagacagttggtactctccctgagtcgaagcaaggccatgacagtcgtgctactgtgagtaacacactacacttaacatgctgtctgtatctgatttactacacaaatttctatcttgcatttaatctacattaggcaagtacatagcataagtaatggagcaagtatctatcaattactcaatgccgatatagtcatttgagcagaagggcaaatgaagcagcaattccttactagtttagtaattcaagtagcttgtaaagatgattagccaaaacactgatgcagtacacaggcacatacttctgtcataattagcaacttcatttcctttgtgttcatgggagtgtgcttttatgccagaaactactcaactcgggagaataccaagtcattctgcgcaaggagctgacaaagagtgatgttggaaatgttggaagaattgtgctacccaaggtgtgttccgtatttctgtctcttggaagttctctagtatcattctgtgagaactttcatgtggtctaaactatgcttcataatgtaactgtctgactttatttcagaaggatgcagaggctagtcttccacctttgttgcaaagggatcctttgatactgcacatggacgacatggtgctcccagtgacatggaagtttaagtacaggtgcctttcctgccatcttatgacatctctcacatgcgatttctgaaagacaacaaagaaaaaatggttctgaattgcaatgacttaacaagatgcctagattaagaaaaagtgggaggttgaaggcactgtatgcattaagttccacagcatgtttaggaatctgaaatttgtaaagcagttcataggttcatacatcttgtggcagctgcctgattgctaattctggttcggttacatgatcagttttcacaggatggagaaaccgatacattgctgcctaacctagatatactctagcacttgctactactaattcacagagtcaacgatgctatttcaggtactggccaaataacaaaagcagaatgtacattctggattctgcaggtatgattcaacatggaaagtattgagtatttcctgcggaagtggacatggtagattgatatttcgtattcatattggcaggtgaatttctgaagacacatggtcttcaggctggggatgtcatcattatctacaaaaacttggctcctggcaaatttgtatgcaacccttttctttcctgtttcttcctttttgtatattgcatatctgacgtcagcatttatggcttgcaaatctcaatcatcgcttgacataactgataaaaatgctcagtacaaaaagttgagaaaccttactaaatactacatccgttttttaatatatgacgcaattgactttttgacaaacgtttgatcatttgtcttattcaaattttttgtgcaaatatatatatatatattaagtgatgcttaaagaacatttcacaataaattaagtcacaataaaatatatgataattacatatttttttggaataaaatgaatagtcaaacatatctcaaaaagtcaacggtgtcatatattaaaaaacagagggagtaaaccaaaatgacaaacatatagatcaccactcatgaatattctgtgggatgcactcaaagttgccatctccgttcattttccctgaaaagtatgttaataacgattcttcgcatatcttattggacccttgtgttttttttacaaagattatccgaggagagaaggccattcatcagcagacaacaaatccctagatgcatttggggttaattgcaacagtgttagttgatgcatttgaagggaaggacgtggacttaccataagttggcaatccaggagaagttgaaagtgtcatcgatttttatatcactggtggccaccatcacatggacaaagattaaagcgcatgcagcttggacctgtttaactctgaatgaatgaggacgaaaaaaagacaagattggtagagtattggaagtgttggcaatgggcttctacagcttatcttgggttgagaaaagcacttgtcagtttatttaattcagttatgttggggagcttgacttgtagttttcagaacaatatatttgcagcttctgtaaatatttttggatctataagataaaagagagtggtgtgtgattttgcttttgatgtcatccatctatttctcatactaatgccaggaatgtctgttcattgtcagc</dnaseqindica> |
| External Link(s) |
