Os05g0443300
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Contents
Annotated Information
Function
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Expression
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Evolution
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Structured Information
| Gene Name |
Os05g0443300 |
|---|---|
| Description |
Sec23/Sec24 trunk region domain containing protein |
| Version |
NM_001062208.1 GI:115464146 GeneID:4338928 |
| Length |
4934 bp |
| Definition |
Oryza sativa Japonica Group Os05g0443300, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 5:21738605..21743538 |
| Sequence Coding Region |
21738605..21738831,21738929..21739143,21739787..21740052,21740490..21740613,21740902..21740997 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008398:21738605..21743538 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008398:21738605..21743538 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atggcggcgcgcgctacgttctcccgcttccccgtgacggcggaggcgctggaggcgtgcgccgtgcagtggggcatcgccgtgacgcccttcgccgccgccgacgagcgcggccaggcgccggccgcgggcgccggcggcgaccgggtcccgcgctgcgagcactgctgggcctacctgaacagccactgcgacatggagcgctggggctggtcctgcgccctctgcggcaccctcaacggcttcgacgacgacgcgctccgccgcctccaacaccccgaagggtggcctgagctcacctcctccttcgttgacctcgagatcccagtggatggctcggagggtgcaggagacggtgtgcaggcgcgccctgtgtatgtagcggctgtcgatcttgcatgttctgaagagttcctggagcttattaagagtgcacttctggcagctctagaagctctgattccaggctccctgtttgggcttatgacgttcagtcacaagattggactgtatgatgtacaaggtccaattccagttgtaaaaaatgttttcatccctccagacacagaagaagatgggctgcctgttgcccttgaagatgccatgcccctactttcttttttggcccctatcgacacatgcaaagatcgaattgctgctgcccttgatacattgcgacctacatcttcatgggagcgaggtgctgcttctgggcaggaacctgatactgttttgcttggtggccgaggttttggaacagccatgtctgctctaactgactacctaagttcagagtatggaactacttttgctttgggtatgcctaactacattttttttttaaaaaaaattcaaacagctagggtatttgcttttctgtctggtgctcctgattatggagatggtcaactagacactaggagatatggtgaacaatatgctagcaaaggggaagaccctgaccttgcattacttcctgaacagataccattttataaagacctggcagctgtcgctgttcaagcaggagtatgtgtagacatatttgctataaccgacgaatacaccgatttggcttcgttgaagtttttaagtattgaaagtggtggctcattgtttctgtatacaaatacagacgattcaacacttccccaggacatatatcgcttattgagtagaccctatgcatttggttgtgttctaaggttgagaacatcttcagattttgaacctggcaattcttatggccatttcttccctgatcctcaatatgaacatgtgcaacatatcatctgctgcgattcatttgctacttatgcatatgactttaacttttcacaccctgagggcttttccaggcacacagatcctgctgttgtacaaattgcatttcagtatagtgttattgaacctgtcaagcatacatcagagaatgaaacacaatcatctacaagtaacatgttttgtctaaagaggcggttgagaataaggacattgcagtatcgaccagctaaaaatatcaacgaaatatatgacagtgttgatccagagactctcctacatattctagtacataaggttattttaatttcattggataaaggagttaaagagggcagaagtttggtacatgattggctgtctctccttatagctcggtataatcaggcattgagatctgatgcacgaattccagaatcacatgttgatgttgacttcttacagtgcccacagctgcaaatgttacctcagcttgtgtttgcattgttaaggaaccctcttcttcagttgcatgaagaaggcattcacccagattacaggatatatttgcaatgccttttcagtgccctggagccatcttctctagccaaagctatatacccagttttagtttcatactcgtcacccgacaagcaagcattccctcggcatacgttgagccgggctgctctaatcatgagtgagagccccatatttcttctggatgcatttacgaaccttattgtttactattcaccgtctgctgatccttcacttccttttcctccacctcatgactgtcttttgagaaccatggttaatgagttgaagcagggcaggtgtataacaccaaagctgacatttatccatggaggacgagaagatccagcattgtttgagaggtatcttattgaagagcaagatgttgacggtacagggtttacaagtggtaaagggtttgtatcgttccgtgagagcatcaggcatgctgcaacagacatcatcgagacagaaagtagtatctag</cdnaseq> |
| Protein Sequence |
<aaseq>MAARATFSRFPVTAEALEACAVQWGIAVTPFAAADERGQAPAAG AGGDRVPRCEHCWAYLNSHCDMERWGWSCALCGTLNGFDDDALRRLQHPEGWPELTSS FVDLEIPVDGSEGAGDGVQARPVYVAAVDLACSEEFLELIKSALLAALEALIPGSLFG LMTFSHKIGLYDVQGPIPVVKNVFIPPDTEEDGLPVALEDAMPLLSFLAPIDTCKDRI AAALDTLRPTSSWERGAASGQEPDTVLLGGRGFGTAMSALTDYLSSEYGTTFALGMPN YIFFLKKIQTARVFAFLSGAPDYGDGQLDTRRYGEQYASKGEDPDLALLPEQIPFYKD LAAVAVQAGVCVDIFAITDEYTDLASLKFLSIESGGSLFLYTNTDDSTLPQDIYRLLS RPYAFGCVLRLRTSSDFEPGNSYGHFFPDPQYEHVQHIICCDSFATYAYDFNFSHPEG FSRHTDPAVVQIAFQYSVIEPVKHTSENETQSSTSNMFCLKRRLRIRTLQYRPAKNIN EIYDSVDPETLLHILVHKVILISLDKGVKEGRSLVHDWLSLLIARYNQALRSDARIPE SHVDVDFLQCPQLQMLPQLVFALLRNPLLQLHEEGIHPDYRIYLQCLFSALEPSSLAK AIYPVLVSYSSPDKQAFPRHTLSRAALIMSESPIFLLDAFTNLIVYYSPSADPSLPFP PPHDCLLRTMVNELKQGRCITPKLTFIHGGREDPALFERYLIEEQDVDGTGFTSGKGF VSFRESIRHAATDIIETESSI</aaseq> |
| Gene Sequence |
<dnaseqindica>4708..4934#4396..4610#3487..3752#2926..3049#2542..2637#2289..2404#2128..2209#1855..2009#1582..1764#1278..1469#1019..1194#854..907#436..507#1..328#atggcggcgcgcgctacgttctcccgcttccccgtgacggcggaggcgctggaggcgtgcgccgtgcagtggggcatcgccgtgacgcccttcgccgccgccgacgagcgcggccaggcgccggccgcgggcgccggcggcgaccgggtcccgcgctgcgagcactgctgggcctacctgaacagccactgcgacatggagcgctggggctggtcctgcgccctctgcggcaccctcaacggcttcgacgacgacgcgctccgccgcctccaacaccccgaagggtggcctgagctcacctcctccttcgttgacctcgagatcccaggttttattacctcttttccttcctcctcctgcgtcagcgtggtttctcttagctggtagtaccgtagtgaaatgtaacccgacaacccatgaattgggtttgtgcagtggatggctcggagggtgcaggagacggtgtgcaggcgcgccctgtgtatgtagcggctgtcgatcttgcatgtaagtggaatccttcgcgtattgcaccgtgatcatggaattttttgaatattgcccccctcccctctgcagtttgtagtggtgggaatttaattttgcttgttatataatgtaatcttacccaagtaaacccaactatatgagaaacatagagaaaggagagaaaaaaaatgaaatcgtgtagctcaaatttgtatgctgttatttgataatatctgcaggtatgagtctaggagctgagcattcgatgattatttagttgcatttcatcttcaaacagtcccctcagttcgtgctcatatgatttattttcagaattgttattgtagtgtttgaatgtattcaggttctgaagagttcctggagcttattaagagtgcacttctggcagctctagaaggttactgttttgaacacttgaaacttactgaattattggctgcctgaactgtgaattgtcagtgagtataatttatgttgctcctcagttggctttttctctgtgcaacagctctgattccaggctccctgtttgggcttatgacgttcagtcacaagattggactgtatgatgtacaaggtccaattccagttgtaaaaaatgttttcatccctccagacacagaagaagatgggctgcctgttgcccttgaagatgccatgcccctactttcttttttggcccctgtatgttatgatattataataagtgttacagtttgctgagtcattttgaacatgtaataatggcaagataaatttatgagcagatcgacacatgcaaagatcgaattgctgctgcccttgatacattgcgacctacatcttcatgggagcgaggtgctgcttctgggcaggaacctgatactgttttgcttggtggccgaggttttggaacagccatgtctgctctaactgactacctaagttcagagtatggaactacttttgctttgggtatggtaacatatattcccaatgtgtgcattttttttaaatgattcttgtcagtcatgcattacttttctaagataagatgatgtacttgctgatatttttattaaatctttttagcctaactacattttttttttaaaaaaaattcaaacagctagggtatttgcttttctgtctggtgctcctgattatggagatggtcaactagacactaggagatatggtgaacaatatgctagcaaaggggaagaccctgaccttgcattacttcctgaacagataccattttataaagacctggtaagctccgaatgattctggagggaaagaaattacatttttggctgaacatgtttggcatatgtcaaccttattgaaaatttgaaacaggcagctgtcgctgttcaagcaggagtatgtgtagacatatttgctataaccgacgaatacaccgatttggcttcgttgaagtttttaagtattgaaagtggtggctcattgtttctgtatacaaatacagacgattcaacacttccccaggacatgtgagcttgatcgtttgtttgtcttttttttttctgcacttcattcaaattccatattccaaattttctgatccacatgaatggcctttgccccttggtttgccttttcctctaacagatatcgcttattgagtagaccctatgcatttggttgtgttctaaggttgagaacatcttcagattttgaacctggcaattctgtaagaattcaagctatttatgtttaataactttgatgtattgtcaagtcaatatctaatgcatctgtcatttttacagtatggccatttcttccctgatcctcaatatgaacatgtgcaacatatcatctgctgcgattcatttgctacttatgcatatgactttaacttttcacaccctgagggcttttccaggtatgatttttttttctcagtatatatttcactcaaccatgggactttccaactttctgccttgatcctatcaatttagtgaagacatgtgatacttgtcatcagtgatcagataatatgttttacatttttcacaggcacacagatcctgctgttgtacaaattgcatttcagtatagtgttattgaacctgtcaagcatacatcagagaatgaaacacaatcatctacaaggtatgcaggattttggcattccttagtttaccgttaagttagtctgttccatgcctaattggcctcctttctggccgaacatgccaagcctcttgtgctattaacatttaatatttctgtttttctactactagttcctgtgcttacaatgattaataatgcatgagtgagtatagtaatgttacatagcttcatttgttccttcttcagtttcatctttgttgctgtgcttttggtcaagtgatgtctaattttcaagttgattaattataatgtcacatcctacagtaacatgttttgtctaaagaggcggttgagaataaggacattgcagtatcgaccagctaaaaatatcaacgaaatatatgacagtgttgatccagagactctcctacatattctagtacataaggtaaccatgttcagttttcttgaaatcataccacttcatttcaagatgttcggcagtttgagaagaaaaatctttatggttcattcggttactctgttgcatgatatgttgtcaggattagaaatgtagtgaactcaagaccattaaaatagtgtgctatggatttcgattggtgaaggttctatttaaggaagattcctctgtagattgaattctgtaagaaaatcattaggaagacgttttttgtagctttttttaaaaacaattttgttgaatgattatccaagtttttcttggagctccatgtttacgccttttaactaacaacacctgtgaggaatatcacttttctttcttgccctaaattaactttgatttctatacttttactatttttgctctcctaacttaagtctattctgaaatgttggcatcaggttattttaatttcattggataaaggagttaaagagggcagaagtttggtacatgattggctgtctctccttatagctcggtataatcaggcattgagatctgatgcacgaattccagaatcacatgttgatgttgacttcttacagtgcccacagctgcaaatgttacctcagcttgtgtttgcattgttaaggaaccctcttcttcagttgcatgaagaaggcattcacccagattacaggatatatttgcaatgccttttcaggtgggaaatcaaaatctaaatttagggctttgtacactgttcattaaaaaaagcatctaaaagaatgatgttgtagaatatttgcactagcaattacttaaaagaatcatagatgttatacatgttagaatatgcacgctagcaaaaaaaacgttgggaaaaattataatcatgtatactgtaggaaacacaaggggtttgtagccaaacttaaccaagccaaaatcttggcaatgcccaaaaaaaagtcacttgtttggtttgtagctaaaagaattggcattgccaaattatttggcttagttgaaggccaaatgcaactttggtagtaaagcaaatgagtgcctagccaatttttaccagaaaaaaattggcaaaggccaattcttgccattgccaaaaattggtaaggctagggatgactatgaaccaaacaagcccaagattgtacacattttctataatcatgtgtactgtaagaaaggcaaaatattgaccactctgagaactaaaaggaaaagataagaataaattgctgctgctgctgctttggatctattttgctttatttggaattgaagccaattttctatctccaagcgtacaagttttttattgaaactcctttccgttgttattacagtgccctggagccatcttctctagccaaagctatatacccagttttagtttcatactcgtcacccgacaagcaagcattccctcggcatacgttgagccgggctgctctaatcatgagtgagagccccatatttcttctggatgcatttacgaaccttattgtttactattcaccgtctgctgatccttcacttccttttcctccacctcatgactgtaagtacaccatttcactgtttgcatggtgtgcattgtttttttcacttgattgcttcatctacttatttgtttcatatctttgcatatcacgtaggtcttttgagaaccatggttaatgagttgaagcagggcaggtgtataacaccaaagctgacatttatccatggaggacgagaagatccagcattgtttgagaggtatcttattgaagagcaagatgttgacggtacagggtttacaagtggtaaagggtttgtatcgttccgtgagagcatcaggcatgctgcaacagacatcatcgagacagaaagtagtatctag</dnaseqindica> 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