Os09g0547300

From RiceWiki
Revision as of 21:03, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os09g0547300

Description

Protein of unknown function DUF630 domain containing protein

Version

NM_001070384.1 GI:115480510 GeneID:4347768

Length

5857 bp

Definition

Oryza sativa Japonica Group Os09g0547300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:22462512..22468368

Sequence Coding Region

22462918..22464547,22464630..22464775,22465368..22465591,22466724..22467483

Expression

GEO Profiles:Os09g0547300

Genome Context

<gbrowseImage1> name=NC_008402:22462512..22468368 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:22462512..22468368 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggggtgcgggcagtcgaagatggaggaggagtacgcggtgcggcactgcagggagaggtcggagctgctcgccctcgccatccgccaccgctacgcgctcgccgacacccaccgtgcctacgccgaatccctcgccgccgtcggcgccgtgctccacgacttcctccgcggcgtccagtcgctgcccccgccgccgctcgagcccacgctccgccttcccgcccaccgcaagggcgacaacctccccaccgcctcccccgtcccggccaaccccgccatcgcctcctcctccgccgcccagccgctgccgcccgtcgccaagcaggtacgaatcgccgccgcccccgatgacggcggcggcggcggccacatccacttctcggacgacgactccgattccgagggcggcgggcacatcaagttccactccgacgacgagggcgacgcgcccgctcaccgccgcccagagatcgtccgctccgccgcgccgccggtggctccgccgccgcagatggggccaccaccaccgtatggctccggatatgctcctcctccgccttatggttcgggatacgggtatggatacggccccgcccccgattacggcggcggcatggccgttgccaacggcggctatgacccagggtatggtggtatgggcggagccagtggcggcggcggcggcggcggctatgcgcctggatatggaggcatgggagttggggatggcggcagcggtggcggctatgagccagcctatggcggcatgggcagctatggccaaagcttcttcaacatcagctatgcgcgcagccagccgcctccgccgtccgtctcatacgagcaccggctgcaggccaccgatgccagggtccactactacgccggagaaggcaaccctcaagcacccccactcgggtatggcggtgggtatggttatccgccgcagggctcgagctcttacaaccagtatgcgtacggtggttactatggtggtgcttctcctccgcctccggccgatataccttctacctcccgcggggaggttacgccaccggcacctccatctccgccgagggtgtctacttgggacttcctgaacccatttgaaacctatgagagctactatgagcagccaactgctgctcaagcgtcatacactcccagcagaagttccaaggatgtgcgtgaggaggaaggcataccagatttggaggatgaggatatggaggtggttaaggaagcttatggtgatgagaagcacgccgccaatgggtacagtggcaaggggaagatggcaaaagaggaaggtggtaggagcagcaccggggatgaactgccccatgaatccaagttatcggaagcgagcagtagcgggagcaaccaggagcatgatgtccatgtagtggagaagagtgttgtgggagaacaggtgcagcggtcagagcctcgtcagcatgtcgcaggcctgccgcccataggatcggagaagacgtactttgatgatgctgaggtggtgctggagatcaggactcaattcgagcgtgcctcaaaatctgccattgaggtgtccaagatgcttgaggttgggaagatgccttactacccgaagagttcaggtttcaaagtgtctgcgatgatgatttgcgggataccaacaatggaggaagagttcctgcggtttgaagaagacaaggcgatggggtgtggcaatctttcctcaacactgcagaaactgtacatgtgggaaaaaaagcttcttgaggaagtcaaggctgaggagaagatgcgggcgttgtatgacaggcaacgtgaggagctgaaaatattagatgagaaaggtgcagaagctgataagcttgaggctactgaaagatccatcaggaagctatcaacaaagataagcatagcaattcaggttgtcaacactatctcagacaagataagtaagctgagggatgaagagttatggccgcaaacatgtgagctcatccaagggttgatgcggatgtggagcactatgttagaatgccatcagatccaattgcatgccatatcccatgctaaaaacatagattccatgataaacggtgcaaagtttggtgaagctcacatggacttgatcaagcgcctagagcttcagcatttggattggatagcctcttttgcctcatgggtgaatgctcaaaaaagctacgttggtactttaaatgactggttgaggaaaggagtcacatatgaacctgaggtaactgatgatggtgtgcctcctttttctcctggacggctaggagcgccacctatttttgtcatatataacaattgggcagttggtgtggggaggatatctgagaaggaagtagttgaggcaatgcaggcctttgcatctaatgttcttggcctctgggaaaggcacaggtcagagcaaagacaaggtcttatggctaataaaggtatggacaaggaccttagggtgatggaaagggatgaacagtcgatgcgcaaggctctggaagcacaaaataagaagctggtgctcatttctaatcagagcggtgtatccttatcagcacaagcacaggccttacaagatggaggttcccatggtgatactggtagtttgcaactaagtctgaagaatatttttgaagcaatggagaacttcaccgccaactctgcaaacacctacaaggatctccacctgcgtgctgaagaagagaaagctcgcgttgcccaagagagttgcagagtttcctag</cdnaseq>

Protein Sequence

<aaseq>MGCGQSKMEEEYAVRHCRERSELLALAIRHRYALADTHRAYAES LAAVGAVLHDFLRGVQSLPPPPLEPTLRLPAHRKGDNLPTASPVPANPAIASSSAAQP LPPVAKQVRIAAAPDDGGGGGHIHFSDDDSDSEGGGHIKFHSDDEGDAPAHRRPEIVR SAAPPVAPPPQMGPPPPYGSGYAPPPPYGSGYGYGYGPAPDYGGGMAVANGGYDPGYG GMGGASGGGGGGGYAPGYGGMGVGDGGSGGGYEPAYGGMGSYGQSFFNISYARSQPPP PSVSYEHRLQATDARVHYYAGEGNPQAPPLGYGGGYGYPPQGSSSYNQYAYGGYYGGA SPPPPADIPSTSRGEVTPPAPPSPPRVSTWDFLNPFETYESYYEQPTAAQASYTPSRS SKDVREEEGIPDLEDEDMEVVKEAYGDEKHAANGYSGKGKMAKEEGGRSSTGDELPHE SKLSEASSSGSNQEHDVHVVEKSVVGEQVQRSEPRQHVAGLPPIGSEKTYFDDAEVVL EIRTQFERASKSAIEVSKMLEVGKMPYYPKSSGFKVSAMMICGIPTMEEEFLRFEEDK AMGCGNLSSTLQKLYMWEKKLLEEVKAEEKMRALYDRQREELKILDEKGAEADKLEAT ERSIRKLSTKISIAIQVVNTISDKISKLRDEELWPQTCELIQGLMRMWSTMLECHQIQ LHAISHAKNIDSMINGAKFGEAHMDLIKRLELQHLDWIASFASWVNAQKSYVGTLNDW LRKGVTYEPEVTDDGVPPFSPGRLGAPPIFVIYNNWAVGVGRISEKEVVEAMQAFASN VLGLWERHRSEQRQGLMANKGMDKDLRVMERDEQSMRKALEAQNKKLVLISNQSGVSL SAQAQALQDGGSHGDTGSLQLSLKNIFEAMENFTANSANTYKDLHLRAEEEKARVAQE SCRVS</aaseq>

Gene Sequence

<dnaseqindica>407..2036#2119..2264#2857..3080#4213..4972#actaacctagttagccactctattactactacctccgttgccaacgccggaatccatccatccatccccgcgccgcgctgtgccgccgcgagagctttgcggcgggcatgcgggtggggattcaccgcggggtggaagaagctgaagcagcagctggtggcgcaacgccacgaggcgcaccccgctggcacccacaccaacaaaaggagaagattctcgccaccaccactcccactgatcccctcttcttcctcctcgttcgcctgccatctccggagccggaggaggaggaggagtagccgccgcccagatctgcgccgccatgctgccgctgctgcggaggcggcggctgtgaatagctaggtcgtttttattgttgtttttgggttggtttggtttgattccgatggggtgcgggcagtcgaagatggaggaggagtacgcggtgcggcactgcagggagaggtcggagctgctcgccctcgccatccgccaccgctacgcgctcgccgacacccaccgtgcctacgccgaatccctcgccgccgtcggcgccgtgctccacgacttcctccgcggcgtccagtcgctgcccccgccgccgctcgagcccacgctccgccttcccgcccaccgcaagggcgacaacctccccaccgcctcccccgtcccggccaaccccgccatcgcctcctcctccgccgcccagccgctgccgcccgtcgccaagcaggtacgaatcgccgccgcccccgatgacggcggcggcggcggccacatccacttctcggacgacgactccgattccgagggcggcgggcacatcaagttccactccgacgacgagggcgacgcgcccgctcaccgccgcccagagatcgtccgctccgccgcgccgccggtggctccgccgccgcagatggggccaccaccaccgtatggctccggatatgctcctcctccgccttatggttcgggatacgggtatggatacggccccgcccccgattacggcggcggcatggccgttgccaacggcggctatgacccagggtatggtggtatgggcggagccagtggcggcggcggcggcggcggctatgcgcctggatatggaggcatgggagttggggatggcggcagcggtggcggctatgagccagcctatggcggcatgggcagctatggccaaagcttcttcaacatcagctatgcgcgcagccagccgcctccgccgtccgtctcatacgagcaccggctgcaggccaccgatgccagggtccactactacgccggagaaggcaaccctcaagcacccccactcgggtatggcggtgggtatggttatccgccgcagggctcgagctcttacaaccagtatgcgtacggtggttactatggtggtgcttctcctccgcctccggccgatataccttctacctcccgcggggaggttacgccaccggcacctccatctccgccgagggtgtctacttgggacttcctgaacccatttgaaacctatgagagctactatgagcagccaactgctgctcaagcgtcatacactcccagcagaagttccaaggatgtgcgtgaggaggaaggcataccagatttggaggatgaggatatggaggtggttaaggaagcttatggtgatgagaagcacgccgccaatgggtacagtggcaaggggaagatggcaaaagaggaaggtggtaggagcagcaccggggatgaactgccccatgaatccaagttatcggaagcgagcagtagcgggagcaaccaggagcatgatgtccatgtagtggagaagagtgttgtgggagaacaggtgcagcggtcagagcctcgtcagcatgtcgcaggcctgccgcccataggatcggagaagacgtactttgatgatgctgaggtggtgctggagatcaggactcaattcgagcgtgcctcaaaatctgccattgaggtgtccaagatgcttgaggttgggaagatgccttactacccgaagagttcaggtttcaaaggttcgtacagtcagatctcatatgctattcttttgcagttttcaaatatgagttctaatttgacccccaattgccaatatagtgtctgcgatgatgatttgcgggataccaacaatggaggaagagttcctgcggtttgaagaagacaaggcgatggggtgtggcaatctttcctcaacactgcagaaactgtacatgtgggaaaaaaagcttcttgaggaagtcaaggtatgtaatatatgcttggaatttgttgggaatgatttgattcatgtgattcttttgagcatgttatctttcctttttttacacctgcatgttggtagatcctgattggtagtgcagaatccagtccagtgaatatctggatttgtccattctctatgatattggctgatcctttttataaattccagcttcttttaaaggaagaaacgttgtttggttggtgacttttcaatgttttagtggatcaagtagctatcaggaaaaactgcatttcatttctggatggatatgtctactctaatacttagttataagtttttctatttgttatagggaaatattggccttcattcgaatgactgctgccaccatgttttccctccacaagaatcgatctcttccgttttcataccttattggctttatgcttttggcttctagtttgttgttcttactcctaggaatttagtatggcatgtaacacaatgcttttatttcgtcatccttatgggtccacgatttaaatgctatgcatttttccatttatccaattttagattgggcttactcaagtattgtttgcgtattacaggctgaggagaagatgcgggcgttgtatgacaggcaacgtgaggagctgaaaatattagatgagaaaggtgcagaagctgataagcttgaggctactgaaagatccatcaggaagctatcaacaaagataagcatagcaattcaggttgtcaacactatctcagacaagataagtaagctgagggatgaagagttatggccgcaaacatgtgagctcatccaagggtatgcagttatcccttatggcaactttgactttcatatgttagcagcacatagtaaagtaatatctgctgtctgtattctgcttttcttggcacatgattttctaaacctattatctacagttattagcatgtttagcttctgcatagctaattaacttctatctgtggttttttttttctaaaatattgtttagttccattgactgtaattttaaggatgagttgtgtgtagtggaaaaataagttgcccaactgtccaaggttttgtttggtgttattttttttggcagaacgatctttagtgacaggaattagttaattctgtcaagtattctcatcagaccttcggtatggtgaattttctgagaaactctagttgcagaaagctcatgtctaggggtgcattgcattcttcaggtagcagccatggcctatagacatagatataaatagtgtgaactggtatagaacctatcactttacatgtagttttctgatgtattcttaatttttgtacttagccaatttaaaatcctaaaacacacggctggatttgatgcgtatggtcatgtagccatgtagcccctttgtgccgcaacgtaagtttgtcgtgaaacttgtattttcacctttgtgctgcaacataagtttgtcgtgaaatttgtattttcacaaggtaagcccgtcgaggattatacatttcatatgcataccccacctgtaaaattggaagagtagtcatttatgctgccatttcataggggcgtttgatggtccaatgctattcattttttatcactaaatttagcaccttcatagaggcgtgtcatgggcttggaccattttttggatggctggattgccaggataattacctgcctgtggttatgtgccaaaaggattggctgccatttgcttagtctttctgtggttgtgtttttacatactgttctatcctattattagcagccagcccaatgaaatttgtatatacattgggttgtgtgctgttaagatactaagttagcacctatgcatctttgtttgcacccagaattctctgattgtctgagtgctggctttgatacttgctatggatcatttctcaactaaaaaataacaattttcaggttgatgcggatgtggagcactatgttagaatgccatcagatccaattgcatgccatatcccatgctaaaaacatagattccatgataaacggtgcaaagtttggtgaagctcacatggacttgatcaagcgcctagagcttcagcatttggattggatagcctcttttgcctcatgggtgaatgctcaaaaaagctacgttggtactttaaatgactggttgaggaaaggagtcacatatgaacctgaggtaactgatgatggtgtgcctcctttttctcctggacggctaggagcgccacctatttttgtcatatataacaattgggcagttggtgtggggaggatatctgagaaggaagtagttgaggcaatgcaggcctttgcatctaatgttcttggcctctgggaaaggcacaggtcagagcaaagacaaggtcttatggctaataaaggtatggacaaggaccttagggtgatggaaagggatgaacagtcgatgcgcaaggctctggaagcacaaaataagaagctggtgctcatttctaatcagagcggtgtatccttatcagcacaagcacaggccttacaagatggaggttcccatggtgatactggtagtttgcaactaagtctgaagaatatttttgaagcaatggagaacttcaccgccaactctgcaaacacctacaaggatctccacctgcgtgctgaagaagagaaagctcgcgttgcccaagagagttgcagagtttcctagttcctttcgtggtttccatgttacatgagggcatgagccctttttaacgcaaaggagctgactgcagtggttcagatgagcactatagtttgcatggcagcgtcacaattcaagtggcaagtgatgcaccttgcatgaaatagcttctacccagggctgcgggctgccagacaaacctgtggcgtaaatggagacttgctagattgtgtttttttgaattggagcaacactcctcatgccatacagcccaggaactcaattttgctaatagctgaatcacaagacattgccgataggggaagaaaaatctgaagtggcgagtgacaagattcactcaatgttgggaaatcccagtaaatagttggaagatgtaagctgcataaacgaaatgcatggtctaagcatggagcagtaaaatgttccgatcatgagtccaagattcatgaagttgtatccatccatatgaaatagtcaaatgtgatcatgctgccaggttcagggaaagagtcactggaagagtgcaacaatgctagcatgccagtgtacatagttgaaggcaatgcgatatgggatgaaccaaagctgatgctgtgggagatgcttccctcccagctgggaggctgcagcctagctagttcacctgttaggggagtgatggatgatgatgagcttgtaggatagagaaaaaaagtggatgccctgaccccgttctgcagttcactaactgttggatttttttgttccgttatttattatacatataattcatttgtatccctgtacagccggtggctaactcataaacccccccttttttgtgtcatgtttattctatttctcccccatcgactttgcctgtttctgcttctctctcttttaatcgcg</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0547300, RefSeq:Os09g0547300