Os05g0461600

From RiceWiki
Revision as of 20:11, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os05g0461600

Description

Similar to SIK1 protein (Nucleolar protein NOP56)

Version

NM_001062298.1 GI:115464326 GeneID:4339023

Length

663 bp

Definition

Oryza sativa Japonica Group Os05g0461600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:22711150..22711812

Sequence Coding Region

22711241..22711525

Expression

GEO Profiles:Os05g0461600

Genome Context

<gbrowseImage1> name=NC_008398:22711150..22711812 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:22711150..22711812 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtcgtcgcagcggcccggccgtcaccagcggagggcgtcgcagagcgtgttcgtgctcccggataacttcgccgacctcgacgacgtgccggccggcgccggcggcgccggcgaggacggccggaagggcgccgccgcgacggcggacgcggccggcgggcagcagcaggctcgcccatcgccggcggcgcgccaccggagggcgatgtcggtggccgtggcgtcgtccagggagctggagatgatcaaggaggacatgggcagctacaagatcggcgcctga</cdnaseq>

Protein Sequence

<aaseq>MSSQRPGRHQRRASQSVFVLPDNFADLDDVPAGAGGAGEDGRKG AAATADAAGGQQQARPSPAARHRRAMSVAVASSRELEMIKEDMGSYKIGA</aaseq>

Gene Sequence

<dnaseqindica>92..376#ctcacattacccccggccgcaccacccccttcttctccaacctcttgcagctgcagacacaatcgttaaatcgcgatcaccgcagcaagccatgtcgtcgcagcggcccggccgtcaccagcggagggcgtcgcagagcgtgttcgtgctcccggataacttcgccgacctcgacgacgtgccggccggcgccggcggcgccggcgaggacggccggaagggcgccgccgcgacggcggacgcggccggcgggcagcagcaggctcgcccatcgccggcggcgcgccaccggagggcgatgtcggtggccgtggcgtcgtccagggagctggagatgatcaaggaggacatgggcagctacaagatcggcgcctgatgcagcatcgatcgcacacacaggggcgccgtgcttagtacttgcggctaaatcgtcatgtgtatggccggttaattttcgtggttaagcgcggcacgcgtcgcgtcaaccgatgtctcgcttgttctctctcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttttctctcttttggtgaggacatgtaagatgggagatgtaatattatgcttcctttttccacacgatgactgaatgaatcactaaaatgtgtg</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0461600, RefSeq:Os05g0461600