Os05g0523100
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Contents
Annotated Information
Function
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Expression
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Evolution
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References
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Structured Information
| Gene Name |
Os05g0523100 |
|---|---|
| Description |
Nucleic acid-binding, OB-fold domain containing protein |
| Version |
NM_001187565.1 GI:297724260 GeneID:9268714 |
| Length |
6005 bp |
| Definition |
Oryza sativa Japonica Group Os05g0523100, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 5:26104198..26110202 |
| Sequence Coding Region |
26104198..26104380,26104454..26104525,26104608..26104694,26104835..26104924,26105010..26105054 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008398:26104198..26110202 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008398:26104198..26110202 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atggtcggcggcggggtacgtgacggcgacgaggaggcggcgctatggccgcggccgatcatgctggaggaggactactactccagacggcgccgcgcccgcgagcacgaccggcgccgcgccgccgccctcagggaggaggagtccaacgagcggctcgcgcgggagtgcctggatcactacaacgccctgcacccgggcgacgagcacgacctcgcgccgggcgacgtgacgctgtgcagcgcgccatgcaactccaccacctggacgcacggcaacttcgtggctcgccgccgctccggctgcctcgcgtcgttgttcctgccctcccggccgcggacgctcttcttcttcgagcacatgtccagcaaggacttcctcggcgtcgtcacgtgcgtcccgatggctgacgagccggacggcggcggcctcctggcgagagtcccgctctgccgccggtgggcgacccggcgccgccggagcggcaggtgggactgcgtctgcaggacctgcaaccgcggcctccacgtgaagcatccatggctgaagaagaaggtggtcggggagttcccgtgcgggcatctggaggcggcgagcgtctgcaagatgtgcttctcctactccgacgtcgtccatccaagcccggggaagtttgcgcgcgggtaccgggagcacgaggacgatttctggcgtccctgcaacggttcacaacaattacgatatcctgtattagttagagataacatggcacctagcaatttgattactgaattaacaccaaagaacgataggtggagaatcaaagtaaaagttattaggctatgggatgcggttaatcctacaatggttgatgagttctatggtatacagatgattgtactagatgcagagggcaactcaatacatgtctctatctcaaagcaattggcgaaccacttcaggccaaaaattaagattaactcaatatatacttttaaaaatttcaaagttatggaacatgataaataccgtgtcctaaaaaacaatctgaaaatccttttttatcatgataccatagtaaaagagacctgtttgtatttagatgtgattggcttacttagcgggatgaagccgatcgagcaaagaatgctaggaaaaaacacaagcagggagagggtttgcaacatgcgtgaaattgaactccttttattagagggagaaaaagttaaaattactctatggggagatattttagcaaatatggttgacgacgatttgcttgggaagcaaactgtgttcatcgccactggacttctggttaaagaatatgaaaaattattatcatttggagtaacaagttcgacagaagtttttttggatatggaaattcctgcaagcatggaaatattgagcaggcataatgctgaaaaggttttgcccacaatgattgaagtggacgcaagcactcaaggaaccattgaagagcaaatgttctacaatagaaagacattgaaagaaataacagaattgcgatatagtaatatacaacagaaggaatttatatgcacagtcaaagctaaaattgaggagattaaatcaagaaattggtggtatatgtcttgcgataagtgcttttgtggaacaagaaaggaatcaaatgtatacatttgcaattcatgcggaaaggaagcagtgaacccaaaaccacggtatgtaataaaccttgagataagtgaccacactactaggacgacatgtacaatatttaatgaggaagcagaaagaatatttggtcataagtctgtgtccaccatgctggaggaacagaatggacaaattgatatgattcctgatacaatacgtcaaatatgtggaagaatattgatattcagattgaagttgactaaaaggaatttagaagagtgtaaggaagactacaaagtgaactacacttttacacctaatgaaaagcttgagatgaattatgtaaatgacaaggcagaagagtcaatgttgaagtacaacgatgattatggcttcactgatttgcaaaaatcagaaaatgagtttgggcagcacaattttcaggtaaaagaagagccaaaaaatgaaagtagtgatgattatgaaaagaacaatcatcgcaaaacaaagaaagagagatcaaacatgagatctacaaaaagatcaaagaaggaaccatacattaccgattctgatgggaaaacaaatgaaaaggcaatcacaatcgatgatgattccgaagaatcacttgatgattattttgatgaagaatacaataaaaaggttacccaggagagtacaaagacaaatccttctaaaagaagagttacaagacgctttaaaatagctaacaagtcaatgttgaagtgcaatgatgattatggcttcactgatttgcaaaaatcagaagatgagtttgggcagcacaattttcaggtaaaagaagagccaaaaaatgaaagtagtgatgattatgaaatgaacaatcatcgcaaaacaaagaaagagagatcagacatgagatctacaaaaagatcaaacaaggaaccatacattactgattttgatgggaaaacaaatgaaaaggcaattacaatcgatgatgattgtgaagaatcacttgatgattattttcatgaagaatacaatgaaaaggttacacaggagagtacaaagacgaatccttctaaaagaagagttacaagacgttttaaaacatctaacaaggctaagaaaggaaaatgttctgaaatgaaaactcagagaaataaggaaccatatactactgattgtgagaagatagcaaatgacaaaccaatttcgcttgatgatgattttgatgaagaatataataaaaatatggtaaggggaaaaggttgtggaaagaagagtacaaatatgggaacttgcacaaaaagtgcaattgaaaatacaattcaagatgatgaagtgcatgacggaaaaattgcttcaggaactgctaaaagaccatcaaggaaatttataatttcagatagtgaggatgagcacagcagtaatacaaaggtgactggggacagcaccagctgtaatagtagtaaggaagatataaacaaaggtcgatgcaattataatattgagaacattaaagttgacatgaatgagcagtccagtcgatgcagatcaacaaggattagaagaccacccacccgatactcatattag</cdnaseq> |
| Protein Sequence |
<aaseq>MVGGGVRDGDEEAALWPRPIMLEEDYYSRRRRAREHDRRRAAAL REEESNERLARECLDHYNALHPGDEHDLAPGDVTLCSAPCNSTTWTHGNFVARRRSGC LASLFLPSRPRTLFFFEHMSSKDFLGVVTCVPMADEPDGGGLLARVPLCRRWATRRRR SGRWDCVCRTCNRGLHVKHPWLKKKVVGEFPCGHLEAASVCKMCFSYSDVVHPSPGKF ARGYREHEDDFWRPCNGSQQLRYPVLVRDNMAPSNLITELTPKNDRWRIKVKVIRLWD AVNPTMVDEFYGIQMIVLDAEGNSIHVSISKQLANHFRPKIKINSIYTFKNFKVMEHD KYRVLKNNLKILFYHDTIVKETCLYLDVIGLLSGMKPIEQRMLGKNTSRERVCNMREI ELLLLEGEKVKITLWGDILANMVDDDLLGKQTVFIATGLLVKEYEKLLSFGVTSSTEV FLDMEIPASMEILSRHNAEKVLPTMIEVDASTQGTIEEQMFYNRKTLKEITELRYSNI QQKEFICTVKAKIEEIKSRNWWYMSCDKCFCGTRKESNVYICNSCGKEAVNPKPRYVI NLEISDHTTRTTCTIFNEEAERIFGHKSVSTMLEEQNGQIDMIPDTIRQICGRILIFR LKLTKRNLEECKEDYKVNYTFTPNEKLEMNYVNDKAEESMLKYNDDYGFTDLQKSENE FGQHNFQVKEEPKNESSDDYEKNNHRKTKKERSNMRSTKRSKKEPYITDSDGKTNEKA ITIDDDSEESLDDYFDEEYNKKVTQESTKTNPSKRRVTRRFKIANKSMLKCNDDYGFT DLQKSEDEFGQHNFQVKEEPKNESSDDYEMNNHRKTKKERSDMRSTKRSNKEPYITDF DGKTNEKAITIDDDCEESLDDYFHEEYNEKVTQESTKTNPSKRRVTRRFKTSNKAKKG KCSEMKTQRNKEPYTTDCEKIANDKPISLDDDFDEEYNKNMVRGKGCGKKSTNMGTCT KSAIENTIQDDEVHDGKIASGTAKRPSRKFIISDSEDEHSSNTKVTGDSTSCNSSKED INKGRCNYNIENIKVDMNEQSSRCRSTRIRRPPTRYSY</aaseq> |
| Gene Sequence |
<dnaseqindica>5823..6005#5678..5749#5509..5595#5279..5368#5149..5193#4880..5062#4676..4804#4543..4602#4232..4414#4028..4156#3891..3950#3520..3817#3292..3446#2971..3109#2802..2883#2613..2731#2404..2531#2085..2258#1865..2016#1643..1675#1..706#atggtcggcggcggggtacgtgacggcgacgaggaggcggcgctatggccgcggccgatcatgctggaggaggactactactccagacggcgccgcgcccgcgagcacgaccggcgccgcgccgccgccctcagggaggaggagtccaacgagcggctcgcgcgggagtgcctggatcactacaacgccctgcacccgggcgacgagcacgacctcgcgccgggcgacgtgacgctgtgcagcgcgccatgcaactccaccacctggacgcacggcaacttcgtggctcgccgccgctccggctgcctcgcgtcgttgttcctgccctcccggccgcggacgctcttcttcttcgagcacatgtccagcaaggacttcctcggcgtcgtcacgtgcgtcccgatggctgacgagccggacggcggcggcctcctggcgagagtcccgctctgccgccggtgggcgacccggcgccgccggagcggcaggtgggactgcgtctgcaggacctgcaaccgcggcctccacgtgaagcatccatggctgaagaagaaggtggtcggggagttcccgtgcgggcatctggaggcggcgagcgtctgcaagatgtgcttctcctactccgacgtcgtccatccaagcccggggaagtttgcgcgcgggtaccgggagcacgaggacgatttctggcgtccctgcaacggttgtaaaatgtaaacgcttgtccatgaactaaccctaccaatgtttgaaaaacacgaatattagaaaagaacataatacaaaataaatagaaggggtgaaactttaaatccagaccggttaacccaccagatgctaaccggaaaacccctagccatttctccctaccaatgtttcatgtcgcttactcaaatctatctatctatctatctatctattatctatctatctatctatctatctatctatctatctatctatctatctattatctatctatcttctatctattatctatctatctatctatctattatatactaaaagtccattaaactccctacaaacgctctcaagctgccacgtgtctccctcaaaacactctcaagttgccacgtggcgtaacgagaggaattcagcacctcgtagggcccgcacattatttccataaatatatgtacgtgtacacagggcaagattccaaatctcaaaaagcaaaatttagatcactaggaaagattattaattgcaagaaggattagttccatatacatgagacaatattcgtaaggcttgcatacatatatatacaccccgccagcatgcgacattagtcgattccggaagaagtcgattccgacgacggagcagaagaagtcgattccggcggacggagcagaagaagtctgcggcaccttgcgaatcatctatggcataagaaggtatatcacgcacccacaaaagaacacaatcatgacatcatctaatcatgatcttgcagctaggaaataacatatgcatctatacagttttgtcatcatattttcagcagaagaaactaacattgcacctacaaaagaacacaattacgatatcctgtattagttagaggtacattatgttgcatctatgtatacaattttgtcatttttttttccagcacaacaattacgatatcctgtattagttagaggtacattatgttgcatctatgtatacaattttgtcatttttttttccagcacaaaaaagtaaccttgcacctatcaaagaacacaattatgagagtttgtattaattagttctataaaataacataaacatgtatacgactctctgtcaaatttgtttagtaactatatgcagtactactcatttgcagataacatggcacctagcaatttgattactgaattaacaccaaagaacgataggtggagaatcaaagtaaaagttattaggctatgggatgcggttaatcctacaatggttgatgagttctatggtatacagatgattgtactagatgcagaggtatgattgttgtaaacatgtgatttaatatattgttctattatgtaaatactatttttttggtgcagggcaactcaatacatgtctctatctcaaagcaattggcgaaccacttcaggccaaaaattaagattaactcaatatatacttttaaaaatttcaaagttatggaacatgataaataccgtgtcctaaaaaacaatctgaaaatccttttttatcatgataccatagtaaaagaggtaaaatcaaaaagacaatgtttcttggactattacttcgagtttacagacaggaaaacattaaggagtaggttgaataaagatcaacagttatcaggtatgtgcataatcttacttcttttaaacattgttatttgtactaaagacctgtttgtatttagatgtgattggcttacttagcgggatgaagccgatcgagcaaagaatgctaggaaaaaacacaagcagggagagggtttgcaacatgcgtgaaattgaactccttttattagagtaagattgttgtctgcaaatttaaaccagcactaatactttctatgtggtatattttacatgactttattgcatttgtaggggagaaaaagttaaaattactctatggggagatattttagcaaatatggttgacgacgatttgcttgggaagcaaactgtgttcatcgccactggacttctggttaaagaatatgaaagtgaggatgttatttttttctaatttaacgtacttatagttttagtaaactaacgacattgatcatttagaattattatcatttggagtaacaagttcgacagaagtttttttggatatggaaattcctgcaagcatggaaatattgagcaggtgtgcagtagtagcatttaaattcatatatatatttgttgatttgtctaaaattatctgatggattatattgcattttatttataggcataatgctgaaaaggttttgcccacaatgattgaagtggacgcaagcactcaaggaaccattgaagagcaaatgttctacaatagaaagacattgaaagaaataacagaattgcgatatagtaatatacaacagaaggtacatatccattcctatgttacgtttatttttcatttgtgtatttaatgttgggaaaaatctacttgatggctgatgtaatgagcattacctaaattaagtggtacgtttaatcgtgaagtcatctttagtcactctttcaagctgattagttaaccaacattaatttgttttttatttaggaatttatatgcacagtcaaagctaaaattgaggagattaaatcaagaaattggtggtatatgtcttgcgataagtgcttttgtggaacaagaaaggaatcaaatgtatacatttgcaattcatgcggaaaggaagcagtgaacccaaaaccacggtaagcatgctcttcaaattttatttgacatattgtagcaggtatatttaccattaacggcacattgtaccaggtatgtaataaaccttgagataagtgaccacactactaggacgacatgtacaatatttaatgaggaagcagaaagaatatttggtcataagtctgtgtccaccatgctggaggaacagaatggacaaattgatatgattcctgatacaatacgtcaaatatgtggaagaatattgatattcagattgaagttgactaaaaggaatttagaagagtgtaaggaagactacaaagtgaactacacttttacacctaatgaaaagcttgagatgaattatgtaaatgacaaggcagaagaggtatgactatttgcattattcttttttatacatgttatagatcttatattacaatataaatattaatttgcagtcaatgttgaagtacaacgatgattatggcttcactgatttgcaaaaatcagaaaatgaggtaatatataacaaataaaaaaaatatttttgtaatgcatatgatatatatataataatttattggatgttctgtagtttgggcagcacaattttcaggtaaaagaagagccaaaaaatgaaagtagtgatgattatgaaaagaacaatcatcgcaaaacaaagaaagagagatcaaacatgagatctacaaaaagatcaaagaaggtatgtttaattgctttcttacataacaattcgtaaagttgtttatagtagtacactaataatgatgttttataggaaccatacattaccgattctgatgggaaaacaaatgaaaaggcaatcacaatcgatgatgattccgaagaatcacttgatgattattttgatgaagaatacaataaaaaggttacccaggagagtacaaagacaaatccttctaaaagaagagttacaagacgctttaaaatagctaacaaggtacttcatttatttactttccaaattcactcaatttagttttcacataaattatttaccatttcaatatggcactatgatataggctaagaaagatcttatattacaatataaatattaatttgcagtcaatgttgaagtgcaatgatgattatggcttcactgatttgcaaaaatcagaagatgaggtaatatataacaaataaaaaatatttttacaatatatattatatatataattatttattggatgttctgtagtttgggcagcacaattttcaggtaaaagaagagccaaaaaatgaaagtagtgatgattatgaaatgaacaatcatcgcaaaacaaagaaagagagatcagacatgagatctacaaaaagatcaaacaaggtatgtataattgctttcttatataacaattcgtaaagttatttatagtactacactaataatgatgttttataggaaccatacattactgattttgatgggaaaacaaatgaaaaggcaattacaatcgatgatgattgtgaagaatcacttgatgattattttcatgaagaatacaatgaaaaggttacacaggagagtacaaagacgaatccttctaaaagaagagttacaagacgttttaaaacatctaacaaggtacttcatttattttactttccaaattcactcaatttagttttcacataaattatttaccatttcaatatggcactatgatataggctaagaaaggaaaatgttctgaaatgaaaactcagagaaataaggtacaattcttacttttctttcatatacaaaacgatttgtcaaactattactgacatgttatatacaattgatgggtattaataggaaccatatactactgattgtgagaagatagcaaatgacaaaccaatttcgcttgatgatgattttgatgaagaatataataaaaatatggtcatggcggacaccagtacttctaaaagaaaagtcagacactacataggacaaactaacattgtacttcattgagttttactttctatttaatgttacctttcatgtttgtccattaatgtcaatatgctattgtgcaggtaaggggaaaaggttgtggaaagaagagtacaaatatgggaacttgcacaaaaagtgcaattgaaaatacaattcaagatgatgaagtatttgatatatttgttaaataaatcatgtattttaacataaaaacttttttaattaactaactaagaacacaaaatttaggtgcatgacggaaaaattgcttcaggaactgctaaaagaccatcaaggaaatttataatttcagatagtgaggtactgcatgagacaatttatcaagttattaattaatatattttttttgtaacaactaattttttttccataggatgagcacagcagtaatacaaaggtgactggggacagcaccagctgtaatagtagtaaggaagatataaacaaaggtcgatgcaattataatattgagaacattaaagttgacatgaatgagcagtccagtcgatgcagatcaacaaggattagaagaccacccacccgatactcatattag</dnaseqindica> 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