Os05g0551600

From RiceWiki
Revision as of 20:14, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os05g0551600

Description

Protein of unknown function DUF1639 family protein

Version

NM_001062784.1 GI:115465298 GeneID:4339534

Length

1497 bp

Definition

Oryza sativa Japonica Group Os05g0551600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:27499559..27501055

Sequence Coding Region

27499559..27500101,27500202..27500264,27500749..27500898,27500984..27501055

Expression

GEO Profiles:Os05g0551600

Genome Context

<gbrowseImage1> name=NC_008398:27499559..27501055 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:27499559..27501055 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccgcctccgcctccgccgccgcctccgaccaccacacggcgcaggcgaaatcctccccctcggcggctcccccggccggctccgccacccgcactcgcctccacagcttctccttcccgaccaccttcggttggggcacccatcgcctcctccgctgctccaagaacggggactccgctcccgcctccgcctcgcctccgaagcagccgcacaccccgtcgccggagaaggggcaggagacctccgctggcggcgcctctcggccgtcgcggccttggaacctccgcacacgccgctccgccaccgtggcgcccgacgcgtcgagatcggaggccgcggggaagaaggcggcggcggcggcgggaggagggcaggcgctgctgcacccgcctgcgccgttgccggtggtcgccaagaagaggggcttctccgttgcgctcaccagggaggagatcgtcgccgacttcatcgccatccgcggcacggcgccgccgcgccggcccaagaagcgcccgcgcgccgtgcggctcgagcttgatcggctgtatcccggattatcgctggcggacgtgaacctggattcgtacaagatcgtcgaggagatagagggaaaaagatgcagctttggtttctctgcagggcatatatcatgtcttgagttggacattgataccgaagaaaatgaaagtgtacttggggtgcaacaaagtggtttgaaaagagaaaaagaaatctcagctagtgaaattcagaacggcaaaatcattgccaattttcaattaagaaaggtgttagctggcattaattacctcttccagaattag</cdnaseq>

Protein Sequence

<aaseq>MAASASAAASDHHTAQAKSSPSAAPPAGSATRTRLHSFSFPTTF GWGTHRLLRCSKNGDSAPASASPPKQPHTPSPEKGQETSAGGASRPSRPWNLRTRRSA TVAPDASRSEAAGKKAAAAAGGGQALLHPPAPLPVVAKKRGFSVALTREEIVADFIAI RGTAPPRRPKKRPRAVRLELDRLYPGLSLADVNLDSYKIVEEIEGKRCSFGFSAGHIS CLELDIDTEENESVLGVQQSGLKREKEISASEIQNGKIIANFQLRKVLAGINYLFQN</aaseq>

Gene Sequence

<dnaseqindica>1..543#644..706#1191..1340#1426..1497#atggccgcctccgcctccgccgccgcctccgaccaccacacggcgcaggcgaaatcctccccctcggcggctcccccggccggctccgccacccgcactcgcctccacagcttctccttcccgaccaccttcggttggggcacccatcgcctcctccgctgctccaagaacggggactccgctcccgcctccgcctcgcctccgaagcagccgcacaccccgtcgccggagaaggggcaggagacctccgctggcggcgcctctcggccgtcgcggccttggaacctccgcacacgccgctccgccaccgtggcgcccgacgcgtcgagatcggaggccgcggggaagaaggcggcggcggcggcgggaggagggcaggcgctgctgcacccgcctgcgccgttgccggtggtcgccaagaagaggggcttctccgttgcgctcaccagggaggagatcgtcgccgacttcatcgccatccgcggcacggcgccgccgcgccggcccaagaagcgcccgcgcgccgtgcggctcgagcttgatgtaaggattttggagcctccgcgtgcgcttcatgattcctaatttttgggtctcgatcggggggtgctcaatttttgttcggttttggttcgaattgcagcggctgtatcccggattatcgctggcggacgtgaacctggattcgtacaagatcgtcgaggaggtgagatatcgctcgatacgtttgatgtgttccttcgcccaaaaaatttggttcttttcttcatgtgtgttttcctcttgcagaggtgattggcgccagcgcggtgaagtctgcaaatgagagcaacttttcagatgttcccatgttttgcttttttttcttctgacggctaacatgtccatccaataattatgttggttcttctagatcagaggatggatatagattttatggttgattgtgaataggttttctaattagaagaaaggtggaatcgtatgcgatgtttgtgccctgtggcatatgtggtgtgatgtttggttagctgtcatgttatgtacatggtttcagtctgtgaaatatttctttcggtgcaaatcgcttcaactctgcaagttgttggctgtgatatcactatgtggttttgtagtgttagtgaggatgatatttccttgtattaagctctactttctgcattgcatagatagagggaaaaagatgcagctttggtttctctgcagggcatatatcatgtcttgagttggacattgataccgaagaaaatgaaagtgtacttggggtgcaacaaagtggtttgaaaagagaaaaagaaatctcagctagtgaaattcaggtaggaaatcaaactagttatcaagggtgcgctttgttataatctcctgcttgtaagtatagcttgcattaattttttttaacagaacggcaaaatcattgccaattttcaattaagaaaggtgttagctggcattaattacctcttccagaattag</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0551600, RefSeq:Os05g0551600