Os05g0553700
Please input one-sentence summary here.
Contents
Annotated Information
Function
Please input function information here.
Expression
Please input expression information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this gene
Please input related labs here.
References
Please input cited references here.
Structured Information
| Gene Name |
Os05g0553700 |
|---|---|
| Description |
Similar to Syntaxin 71 (AtSYP71) |
| Version |
NM_001062799.2 GI:297604881 GeneID:4339549 |
| Length |
3511 bp |
| Definition |
Oryza sativa Japonica Group Os05g0553700, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 5:27611836..27615346 |
| Sequence Coding Region |
27611979..27612134,27612236..27612364,27613236..27613401,27614094..27614179,27614290..27614358 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008398:27611836..27615346 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008398:27611836..27615346 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atgagcgtgatcgacatcctcacgcgggtggactccatctgcaagaagtacgacaagtacgacgtcgagaggctcaacggcgccaacgtcgccggcgaggaccccttcgcccgcctctacggctccatcgacgccgacatcaacgaatgcgtcgagaaagcggaggcggcgaagcaggagaagaaccgcgccacggtggtcgcgctcaacgcggagatccggcgaaccaaggccaagctcgtcgaggaggacctgcccaagctgcagcgcctcgcgctgaagaaggtcaaagggctcacaaaagaggaactcgcgacccgtagtgatctggttgctgccttacccgatagaatacaatcaataccagatggtagttcaagtgcaaagaaaaatgggacttggggcgcctcaggatcccgtactggtggagccattaagtttgacacttctgatggcaactttgatgatgagtactttaagggaacagaagaatcaaatcagtttcgtcgggaatatgagatgcgcaaaatgaaacaggatgaaggtttggatattatcggtgaagggctggaaactctgaaaaacatggcatctgatatgaatgaggaactggataggcaagttcccttgatggatgaaatggacgagaaggtggatagagccaacacagatttgaagaataccaacgtcagactaaaagagaccgttcttcagctgagatctagtcgcaacttctgcattgatatcgtcctgctctgtgttattcttggtattgcggcttatctttacaatgttctaaaaaaagtgagaccggactgtgccatggatctattttccacgtcttccggtgatggatggatgagtttcgacgtgtccacgagctgttccctttatttttatctcatctgtgtaatagtagtatggtgttcttccgggacttgcgaacatccttgttga</cdnaseq> |
| Protein Sequence |
<aaseq>MSVIDILTRVDSICKKYDKYDVERLNGANVAGEDPFARLYGSID ADINECVEKAEAAKQEKNRATVVALNAEIRRTKAKLVEEDLPKLQRLALKKVKGLTKE ELATRSDLVAALPDRIQSIPDGSSSAKKNGTWGASGSRTGGAIKFDTSDGNFDDEYFK GTEESNQFRREYEMRKMKQDEGLDIIGEGLETLKNMASDMNEELDRQVPLMDEMDEKV DRANTDLKNTNVRLKETVLQLRSSRNFCIDIVLLCVILGIAAYLYNVLKKVRPDCAMD LFSTSSGDGWMSFDVSTSCSLYFYLICVIVVWCSSGTCEHPC</aaseq> |
| Gene Sequence |
<dnaseqindica>144..299#401..529#1401..1566#2259..2344#2455..2523#2619..2663#2767..2829#2918..2994#3195..3360#accgtgcgctgcttcggtttgctcgggcggagaaaggaagggcagcgtcgcggttgcttgcttcctcccgaatcctcgcctcgatctcgctcgcgggcgggcggagggatcgtgatcgggatcgggatcgggggcgcgcgaagatgagcgtgatcgacatcctcacgcgggtggactccatctgcaagaagtacgacaagtacgacgtcgagaggctcaacggcgccaacgtcgccggcgaggaccccttcgcccgcctctacggctccatcgacgccgacatcaacgaatgcgtcgaggtctggatgcgaattcccttcctcctctctgtctccgcgtccgatttggtggttggctggctcctcccctcgatctgaatctggggggcactttgtttcagaaagcggaggcggcgaagcaggagaagaaccgcgccacggtggtcgcgctcaacgcggagatccggcgaaccaaggccaagctcgtcgaggaggacctgcccaagctgcagcgcctcgcgctgaagaaggttactgatctatacactcccccttcttagtttgggtgaatcatgctagatctgcggatactgtggcccgaggactcggtctctccttgttttagtgtagtactcgtagtagcttccaccttaccgcggatggtggatgtctaaatttaggatgactgtaaggaggctctcgtcgttgaggaagtgatttgcatgggccatttgatgttgatggaatggaatttaggattggtggactatgtttgattttttggggggaaatttggggtttcgactgtctgggactagacttttctaaattttactatgaacgagtcaagacttttcattggattgctagaatgaacactaatcgggtgaaactggggtctagatagtctcacagaggaactcaccacatagtcgtgtggttacacattgtattctgtaattggcgtcaaatatgctgtgcacaatccatatgaggtctcttcatcgtttcagtagcctgtgtttattaaagactagatttatttattttaattaggctattgggtaaaggtgatgcagttgatgttaagccttccaatattttctgttgacccagaacttaatgtactctacattttaacttgacattgccatagtgttaactttgtaagattgttgttcccttgctaaagatttctgtccacgccacctgcatgtttgcactaggcaatgtgatgtccttgacactctttcttcatacatgcctgtgttggttatactatatttttaaaacatgcttttacattattcaattatatgatatctataaattgtacataacagtttttcacctagaattttgaagaattggttttcaatattttgttgcaacttgcaacaggtcaaagggctcacaaaagaggaactcgcgacccgtagtgatctggttgctgccttacccgatagaatacaatcaataccagatggtagttcaagtgcaaagaaaaatgggacttggggcgcctcaggatcccgtactggtggagccattaagtttgacacttctggttagtaagcatcattcaacatatcacatgtgtgttctgtatattgatatacaaaatatgcatattttttttctttaaagatgtgtccaacttctacttcccctacgcatcggttgttctagattgcagtaagctgtacattttgcatttgtcggttcattttataagtatcctgcatgtgtatgaggtcgcgtttccaatttatgaaggaatcctaatattaggttcatgcttccatatgcacatgtgcttttttacgacgtcatttttggtaccgcaccatcatcaatgtcacgtgccaacttctactttttagtacactatgttagtgtatattttgattaggtaactcttgtttctatatcagtatgacagtgttgaaatatacaaccatcagattgacagagttttgatcaaccatgcgtgccatcatgcctaaagttgtttgagcaatggttttctgtttcttttctcatcatttcgggcatgctcctgttggatgctcttgttggtcctcttgaaggagtcatgagctgactgattaaccatgcgtgcagtcatgcctaaagttgtttgagcaatggtttttctgtttcttttctcatcatttcgggcatgatcctgttagatgcttttgttggtcctcttgaaggagccatgagctgacctactttcccgcttgccacatacagatggcaactttgatgatgagtactttaagggaacagaagaatcaaatcagtttcgtcgggaatatgagatgcgcaaaatgaaacaggtaatatattaattccccgaacacgcttttcttccttttcatttttggctactgctggaagtgggatttcttatgtaaggtgacctgtgtatggaattgaaattctgcaggatgaaggtttggatattatcggtgaagggctggaaactctgaaaaacatggcatctgatatgaatgaggttggttgctgtgcttcatcttgagttatacaatactatacgatgcaatggttatatgaaacatagttaccatgctcaatttttgtgatcatcaggaactggataggcaagttcccttgatggatgaaatggacgagaaggttggttctccaatagccatggattcctcttctgcaattgtgcaatatccagcaatgcttagtttatttatctcttatttatatggtgtactgatgaatgtaggtggatagagccaacacagatttgaagaataccaacgtcagactaaaagagaccgttcttcaggtaacacctagcactaacttcccttggcatgcttggttgattgcttgagttaaatacttattcgcttctcctcgtgaactgttatcagctgagatctagtcgcaacttctgcattgatatcgtcctgctctgtgttattcttggtattgcggcttatctttacaagtaagtgtttttgtttccagacaagcttcaataccgaagtaaacaatcttctcgacattctctctttacacgacataagaccattcccacattcttaattatatttcttgcatattttcttttagtcatactagtgaggtagcttgttactatagttgttagaccatttgctaatatttctccacgctttcgtgttgcagtgttctaaaaaaagtgagaccggactgtgccatggatctattttccacgtcttccggtgatggatggatgagtttcgacgtgtccacgagctgttccctttatttttatctcatctgtgtaatagtagtatggtgttcttccgggacttgcgaacatccttgttgaaagttgaaacagtgagcattgtgcgtgcgaaaacctgacgtcttctgtacatctgcgagtttaattcttagcaagagcgtatcaaacattctgttatgaactatgtaaaccttctcatgtatattcattgcatcagttctttggttgtgcc</dnaseqindica> |
| External Link(s) |
