Os05g0565200

From RiceWiki
Revision as of 20:14, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os05g0565200

Description

Similar to Urease accessory protein G

Version

NM_001062872.1 GI:115465474 GeneID:4339627

Length

2813 bp

Definition

Oryza sativa Japonica Group Os05g0565200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:28206821..28209633

Sequence Coding Region

28206857..28206936,28207029..28207229,28208001..28208061,28208423..28208624,28208805..28208926
,28209049..28209153,28209275..28209358

Expression

GEO Profiles:Os05g0565200

Genome Context

<gbrowseImage1> name=NC_008398:28206821..28209633 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:28206821..28209633 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgtctcacgaccacgaccacgaccaccaccaccaccacagccacgacgacggcgaccaccaccattcccaccaccaggacggcagccatggcggcggcggcggctcgtgggtcggggaggacgggcgcgtgtggcactcgcacgacggcctcgcgccgcactcccacgagcccatctactcccccggcgacttctccaagcgcgcgccgccgctcatctcgcggcgcttcgcggaacgcgccttcaccgtcggcatcggtggccccgtcggcactgggaaaactgccctgatgctagcactttgcaggtccctgcgtgaaaaatatagtctcgcagcggttacaaatgatatattcacaaaagaggatggagaattcttgatcaaacatggagcactgcctgaagagcgcatccgtgcagtcgaaactggaggctgccctcacgctgcaatacgtgaggacatcagcataaatctaggtcctctggaagaactatcaaacttgtgcaaagctgatttactcctctgtgaatctggaggagataacttggctgccaacttcagcagggaactggcagactacataatctacatcatcgatgtttctggtggggacaaaataccaagaaaaggtggccctgggataacccaagcagatcttttgataataaacaagacagaccttgcaccagcagttggagctgacctggctgtaatggaacgagatgcgcttcgcatgcgggaaggagggccttttgtctttgcacaggtgaaacatggagtcggcgtggaggaaattgtgaaccacatcctgcaagcttgggagatcgccaccggcaacaagcgtcgatag</cdnaseq>

Protein Sequence

<aaseq>MASHDHDHDHHHHHSHDDGDHHHSHHQDGSHGGGGGSWVGEDGR VWHSHDGLAPHSHEPIYSPGDFSKRAPPLISRRFAERAFTVGIGGPVGTGKTALMLAL CRSLREKYSLAAVTNDIFTKEDGEFLIKHGALPEERIRAVETGGCPHAAIREDISINL GPLEELSNLCKADLLLCESGGDNLAANFSRELADYIIYIIDVSGGDKIPRKGGPGITQ ADLLIINKTDLAPAVGADLAVMERDALRMREGGPFVFAQVKHGVGVEEIVNHILQAWE IATGNKRR</aaseq>

Gene Sequence

<dnaseqindica>37..116#209..409#1181..1241#1603..1804#1985..2106#2229..2333#2455..2538#cccggaggaatccgccgcaattcaaggtcggaatccatggcgtctcacgaccacgaccacgaccaccaccaccaccacagccacgacgacggcgaccaccaccattcccaccaccagtgcgtgcagccgggcatctgccccccttttcggctggtggtttgtactgatgatctcgctcactgctgcctgtttgactcggcgcttgcagggacggcagccatggcggcggcggcggctcgtgggtcggggaggacgggcgcgtgtggcactcgcacgacggcctcgcgccgcactcccacgagcccatctactcccccggcgacttctccaagcgcgcgccgccgctcatctcgcggcgcttcgcggaacgcgccttcaccgtcggcatcggtggccccgtcggcactgggtaggttcggccgttcggctccatttcactagctactgtgctttcctggtagtgtagtgtactatcatcaaacagtggcgtggctttcctgtttggtgatggttgtgagttgtgatggtaggtggaggaaggcgcctgctttgcattattctctgaaattgtgcatctttcccatgggtaggattggtgagaaactgagaatttcagcgcacagggcttgattgatctagtttggactttggagagatttaggtgtatgcatatctttggcgataaataagtttacttcttcacgcagatttagttgcttcaattgcttttgacaaaatgtgtttgcgaatgtcggaatgtaatcgttgtgccacagtgccagaagaaaaatagtgattattggtgtggtaatctgggttgtagttttcggtattcttgtaaacttgcttgctaaaaaggcaccttcttgtacatcataccttttcttgctaaaaaggcacctctcttgtacatcaaaatcagtttttctattcttgctttcagaattgtgtttctacaaatctataatagaacagtaagtcggtagcataagcttcctaggatttgttctgtgagttgatcctggttagtttggagcaaaagcgtttgcaattttgcatgttcccttctattgataaaacaagtataacaaccataaagcattgcttgtgtgtgtgttgtaacttgcgaaattagcataagtgatatttgatccctaaaaatgttttttctgctgtacaggaaaactgccctgatgctagcactttgcaggtccctgcgtgaaaaatatagtctcgcagcggtatgtggcaagattcttttactcttccttatcactacatgcttgttgggtttcagatcttttgcaagcaccatcttatcatttgattgtattcaatcaagaatggaacttttcttgattcgcctcttgcttatttgtaaatggtaattcgtaaagtaaattcttgtacaacacgcttccaataattcaacaaaaaagtttgttggtatcattcaacgctttccagcgggctgatatcgaaagacaaggatctatcattcttgtgatactgttcttttttaacatatcaacctagtagtctcaaccatgttttcttgaactcatgcttggacttttgtctctttgctctttgctcttgcaggttacaaatgatatattcacaaaagaggatggagaattcttgatcaaacatggagcactgcctgaagagcgcatccgtgcagtcgaaactggaggctgccctcacgctgcaatacgtgaggacatcagcataaatctaggtcctctggaagaactatcaaacttgtgcaaagctgatttactcctctgtgaatctggaggaggtatttaactctctgaatcccaacattggaagcacttctctattctttttatcatgtatgcttttgcaaaccatcctggcatcctgctacagacagaactgtattatctgtttattttggaaggcattgttatgctaaatccaaaatgaagtgctaaaagaaatactgacacttgtgcagataacttggctgccaacttcagcagggaactggcagactacataatctacatcatcgatgtttctggtggggacaaaataccaagaaaaggtggccctgggataacccaagcagatcttttggtgtgttattactttctccattctgttacgatgcatacctgtatcaaagacgttgatatttctgatatgcttgtacccttttgcatttaccatttgatcaatttcaatctttctgaacacagataataaacaagacagaccttgcaccagcagttggagctgacctggctgtaatggaacgagatgcgcttcgcatgcgggaaggagggccttttgtctttgcacaggttcagtattaaaccatacacatttgttccttttttagcgggggaaaattaacagaagctgatgataattgcaagggacatagctccatatttacacatgcttattttacactgcttccaggtgaaacatggagtcggcgtggaggaaattgtgaaccacatcctgcaagcttgggagatcgccaccggcaacaagcgtcgatagcctgcaggattcttgggcacgagatgttgttgcgctcgcgcgtgtaatcatgtactactccagtatttctgctttcctgaataaactgcatcttttggtggctcggtgttgctgaaagatgctagcatacaagcctccgagacttgtctagctgacagtcgagtccataatctagttctgaatgacaaagtgagaggtctaaactatacctcgaaaaattggtcatgggaatgctattgtcagctactagcagtatataggttccaaatgtcgcc</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0565200, RefSeq:Os05g0565200