Os04g0137100
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Contents
Annotated Information
Function
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Expression
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Evolution
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Structured Information
| Gene Name |
Os04g0137100 |
|---|---|
| Description |
Similar to Pectate lyase (Fragment) |
| Version |
NM_001058638.1 GI:115457005 GeneID:4335013 |
| Length |
5025 bp |
| Definition |
Oryza sativa Japonica Group Os04g0137100, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 4:2467711..2472735 |
| Sequence Coding Region |
2467711..2467835,2468009..2468098,2469125..2469223,2470677..2471319,2471693..2471796 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008397:2467711..2472735 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008397:2467711..2472735 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atggcggaggcggcggcgaggaggtgggcggcggcgctggtgctgctggtgcttctcaccggcaccgtcgagctcatcggcggcggaggcgggagcggcgggcggcggcttctcgctggcctccgggccgggagcacggcggcggcgagcggcacgcggcggtggctgcgcgactcgtcctggccggcgacggcggcggccgcggcggcggcgagcagaggagatgacggtgatggcgatgaggcgtcgtcggcggcgatgacggtgcccggcgcggtggacgacccggaggaggtggtctcgcaagtgcacatgtcgatcaggaacagcacggcgaggaggaagctgggctacctgtcgtgcggcaccggcaatccgatcgacgactgctggaggtgcgacccggactggcacaagaatcgccagcggctcgccgactgcggcatcggcttcggccgcaacgccatcggcggccgcgacggcaagatctacgtggtcaccgaccccagcgacgacgacgcggtgaaccccaagaagggcacgctccggtacgccgtcatccgcgacgagccgctgtggatcgtcttcaagcgcgacatggtgatcacgctcaagcaggagctgatcatgaacagcttcaagaccatcgacggccgtggcgccaacgtgcacatcgccaatggcgcctgcatcaccatccagtacgtcaccaacgtcatcatccatggcctgcacatccatgactgcaggcccaccggcaatgccatggtccggagctcgcccagccactacgggtggcgcaccatggccgacggcgacgccgtctccatcttcggcgccagccacatctgggttgaccattgctcgctctccaactgcgccgacggcctcatcgacgccatcatgggttccactgcaatcacagtgtccaacaactacttcacccaccacaatgaggtgatgctcctgggtcacagcgattcctatgtcaaggacaaggcaatgcaggtcacgatagcattcaaccatttcggagaaggtcttattcagagaatgccaaggtgcaggcatggttacttccatgtggtgaacaatgactacacccactgggagatgtacgcaattggtggaagtgctgagccaaccatcaacagccagggcaaccgctaccttgctccgacaaatccctttgccaaggaggttacaaagagggttgagactgctcagaccatctggaagggctggaactggagatcagagggggatctcctcctgaacggcgccttcttcaccccatcaggtgcaggcgcctcggccagctactcgcgcgcctcaagcctcggtgccaagtcatcatccatgcttttgacaatggttatatatgaccctctccaagaagattcaccatttcctcaacctccccctgctcccaactgtgaacactgtcaatggcagcaggcgagaagcgttgctgattga</cdnaseq> |
| Protein Sequence |
<aaseq>MAEAAARRWAAALVLLVLLTGTVELIGGGGGSGGRRLLAGLRAG STAAASGTRRWLRDSSWPATAAAAAAASRGDDGDGDEASSAAMTVPGAVDDPEEVVSQ VHMSIRNSTARRKLGYLSCGTGNPIDDCWRCDPDWHKNRQRLADCGIGFGRNAIGGRD GKIYVVTDPSDDDAVNPKKGTLRYAVIRDEPLWIVFKRDMVITLKQELIMNSFKTIDG RGANVHIANGACITIQYVTNVIIHGLHIHDCRPTGNAMVRSSPSHYGWRTMADGDAVS IFGASHIWVDHCSLSNCADGLIDAIMGSTAITVSNNYFTHHNEVMLLGHSDSYVKDKA MQVTIAFNHFGEGLIQRMPRCRHGYFHVVNNDYTHWEMYAIGGSAEPTINSQGNRYLA PTNPFAKEVTKRVETAQTIWKGWNWRSEGDLLLNGAFFTPSGAGASASYSRASSLGAK SSSMLLTMVIYDPLQEDSPFPQPPPAPNCEHCQWQQARSVAD</aaseq> |
| Gene Sequence |
<dnaseqindica>1..125#299..388#1415..1513#2967..3609#3983..4086#4263..4401#4517..4678#4909..5025#atggcggaggcggcggcgaggaggtgggcggcggcgctggtgctgctggtgcttctcaccggcaccgtcgagctcatcggcggcggaggcgggagcggcgggcggcggcttctcgctggcctccggtgagctcatcctctaatgcctctcctgcgtctctcttgggatgctctgatcgtgtgttcttggtttgatggaaatttgtgctcgtgttcgtgcttgcgtcttgggagttcgagttgcttgatttttttttttgctgtgatttttgagccctttttgatccgtcccgttccagggccgggagcacggcggcggcgagcggcacgcggcggtggctgcgcgactcgtcctggccggcgacggcggcggccgcggcggcggcgaggtgagctcctcatgtccaattcacctctcctctcccgatggacgcatctggaccgtcggttcgtcaccctcgcgtgatctgggccgttggccaacgaaaagcagatccgggaggttgccgttgcggcggcggtgggtttctttttcctttttttaacggaaacattttcatttaattccgaaaagattcctcaaaaacttttcggtttcgcggttcgtgaaaattcgtaaatttggggggattccggcgcggtgaaaaatccgtgaactctcgattcgggatcagaggcgtgcgagcgtgtgaaatgggagatgcttccgttgcgagttcgttacggtggcagagctgtcaggggcaatatcgtaaatagataatccatccaatttcgccctaagggagaaattattttattttaatttttttttggtgtactccgggttgtcctgcggctgcaccggccatggtcaagcggtgaaaagactttggaaacacacaaaagctgcccaaaagaagcgaagcaaaatccctagcctacgctgcttcgcgtcccccgaaaccgcacccaacaaaaaagagaagatttactatactagattgcgttggtattgcttttggggtgcagcctcgagtgcgcgtagccaaaccgcaggagtaggttactgtttgtttaaacatttttaccttttgttttggagaccgaccgaccatgaatgatccattgcatttttgcatgctcgaatcatcaccacggtgcacggatccatccactcttcccacccactgcaaaagttctttttttaattcaaaacaattcatgccttacaaaatgttggtactagtactattttggtggagtaggtaattaaattcttgtgctgattaaaatcgcaaccttttttagtttatccgtgttaatttcattttgtactgctgctatcagctgcatgtgcattgcagtacgtccattaggttggtcgatcccactctcacctgaaaatgaaaatatgaaatgaaatgattttgcagcagaggagatgacggtgatggcgatgaggcgtcgtcggcggcgatgacggtgcccggcgcggtggacgacccggaggaggtggtctcgcaagtgcacatgtacgtccttttcctccattccagagaccttgttccctctctctcatctaatatcctaattaatcgtaagctgttgttgttaagcattaattaccgtcatcgtttgctttagtgtgactgtcgctgcagattaatttgcaattgtcactggatcattgcatagatctgcttgtttaattgcagtagtgatagagtagcagcagtaagttaagtaagctactatcactagtagcatcagtaatggcctttttttttgtccgcacttttatcgtccgtcccactcacacagcagcacagccaccgccggacaagccgggcccacccgcacagtgacacacacactcacaccactgatctccgaaacaaaaggcgagaaagaaaaagtgaagaaatggaacctgactctgctgagtactcctacctgaccggagcatgcagatctgatccggcgagacgaagccggtgcagcagtgtgctgtactttagttcaacccactgacatgtgggccccacctggcatggagggtgggaggacgctttattgcgacgtactaactcggagggatatgtggccggagcgtattaactccggccaagccgcggcaaccaaactccggccccgtacggacaaacaaaatgaagaaaaaccactagtcctctataaattaggttttaactattttaaacttgaaaaaaagtaaatttatcagatattttttaaataacttctgttgaaaatggtttagcggaaaaatagactgtttaaccgttttaaaagcgcgatcgttatcttagccagaaaagaacgaggcttcatatgctcttcccactgggatagtgaagtggagtgaggtgagtagcagtgtatatgtgtgacacaccacgttctgtggctgcccactcatgtggacctgtctctgcctacctcctgcatttgcgacgcgccaccgtggacgcattcatggcgcgcgcaccagaaaaattccccatccccaaccactaatcaatccgatggtttgtttcacattgcaaacatacatactagtaggctagtagcatcttcatctagctgctgctggtagaaagaaccgactggtgactgacatttgaggtagcagtaggattcgtttggtggcaagaaccgattcagcttattagttggtagtccagtttgttagtagttagtactcgccgacaggtcagctccacccagaagagcttaaaacgagtggacatggatggaattcgtttgttgagttgtgcgcattgatgatcacactctctgtactgtgcctgcattgaaatcccagcttgtcactcatgaaacaagataacatgccagattgcttcatttcgtaattaaaactgaaaactgaacacgatcttggttgattgattcatgatgtgattaaaagataatggagttttttttaacaatggaattcatcatcaggtcgatcaggaacagcacggcgaggaggaagctgggctacctgtcgtgcggcaccggcaatccgatcgacgactgctggaggtgcgacccggactggcacaagaatcgccagcggctcgccgactgcggcatcggcttcggccgcaacgccatcggcggccgcgacggcaagatctacgtggtcaccgaccccagcgacgacgacgcggtgaaccccaagaagggcacgctccggtacgccgtcatccgcgacgagccgctgtggatcgtcttcaagcgcgacatggtgatcacgctcaagcaggagctgatcatgaacagcttcaagaccatcgacggccgtggcgccaacgtgcacatcgccaatggcgcctgcatcaccatccagtacgtcaccaacgtcatcatccatggcctgcacatccatgactgcaggcccaccggcaatgccatggtccggagctcgcccagccactacgggtggcgcaccatggccgacggcgacgccgtctccatcttcggcgccagccacatctgggttgaccattgctcgctctccaactgcgccgacggcctcatcgacgccatcatgggttccactgcaatcacagtgtccaacaactacttcacccaccacaatgaggtatccatctttccatgtttttgtgcatcctagttggatccttccatttcatttttctgtcttgcaatgatcattcatcttttgttttctacacatgtaacttataatccattggaatcactcactcactagtgttttggcgtatgtgaagtacttgtttgtttttataccagcagcactgtagtttagtctaactttcagtggcaaatattcttgcaaatctatctaatctaattaacctcaagattgtcggttggcctggccgtactgctgctgtgtagtatgttgctttttgcatctcacgtggattcgtttgttgtcatatgaaagcagcctgcttggatttttcactgatgataaacgcatgatgcaggtgatgctcctgggtcacagcgattcctatgtcaaggacaaggcaatgcaggtcacgatagcattcaaccatttcggagaaggtcttattcagagaatgccaaggtaaaaactaaaaactgatgaactgaaccaaatcttgtcttatgttcctcaagacacttaaaactctgcaattgtacatacatgcttgtctgtattcagcattgcataggcgaacctgcagtttatttctgacagtttactaactgttgtcatcaaaaaaattgctctttattcaggtgcaggcatggttacttccatgtggtgaacaatgactacacccactgggagatgtacgcaattggtggaagtgctgagccaaccatcaacagccagggcaaccgctaccttgctccgacaaatccctttgccaaggaggtacattttgctttctctgattgtctgtccatcaccaagttcctggattcacattcagcaaccgtttcagtctcttaataactaactagcatttggtatgaacaaactgatgcaggttacaaagagggttgagactgctcagaccatctggaagggctggaactggagatcagagggggatctcctcctgaacggcgccttcttcaccccatcaggtgcaggcgcctcggccagctactcgcgcgcctcaagcctcggtgccaagtcatcatccatggttggcaccatcacatccggtgcgggcgccttgtcgtgccgcgggggctcagcctgctagtgcacaccggagaagagaaagagagagttgcgcaacaccgcaatcgcgccacgacaacacaaaagaaacacaagaattatagaagaagctaaaagctactaccggaacatcgcgggttacagccctttcttttctctccccttctccctctctctctctcttttttgcagcttttgacaatggttatatatgaccctctccaagaagattcaccatttcctcaacctccccctgctcccaactgtgaacactgtcaatggcagcaggcgagaagcgttgctgattga</dnaseqindica> 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