Os04g0165200

From RiceWiki
Revision as of 19:48, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os04g0165200

Description

Zinc finger, C2H2-type domain containing protein

Version

NM_001186831.1 GI:297722792 GeneID:9271610

Length

2852 bp

Definition

Oryza sativa Japonica Group Os04g0165200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:4416578..4419429

Sequence Coding Region

4418218..4419333

Expression

GEO Profiles:Os04g0165200

Genome Context

<gbrowseImage1> name=NC_008397:4416578..4419429 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:4416578..4419429 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaatccacaggagttccaattcttccagggggtggagcaagagatgctcttgctatcccatggcggtggcggcgcggcggcggctgcctcggacgacgtgctcgcctaccatgtcggggtgctaagggacaaggtgcagcagctggagccgctggtcggcatggtcgtcgtctcccccgccgcgccgcacggccagctccggcgcgacgcggcggcgatggcggcgtcgagcgcctgctccgtcctgcaggagataactgccgccgcctccgccgtggcgcaccggctggagcaggccaacgccgcctcctccgcctccttcaggcgaggagtggctttcgccgacgacgcacacgccgccggtggcgtgcagatgttcgcggcgggcgcgcacggcggcggccaaggcggtgatgacgaagccggcgcctcgctgttccaccaccacgggccgccggccgtcggcgcgcccaccgtgttccgcgccggcgccacgacgacggcggccgcgtcgagcagcggcggcggagacgacgacggcgacggcgacggcgaggtggacgtggtggagctggaggcgtcgtacctgctggcgaggtacacgcactactgccaggtgtgcgggaaggggttcaagcgcgacgccaacctgcggatgcacatgcgcgcgcacggcgacgagtacaagacggcggcggcgctgacgagcaccggcgccggcatgagggcggcggcgaggcggtgcagctactcgtgccccgcggaggggtgccggtggaacaggcggcacccgcggttccaggcgctgaagtcggtggtgtgcgcgaagaaccattaccggcggagccactgcccgaagatgtacgtgtgcgggcggtgcggcggcaagcagttcgccgtgctctccgacctccgcacccacgagaagcactgcggcgagctccgatggctctgctcctgcggcaccttcttctcccgcaaggacaagctcatgggccacgtcgccctcttcgccgccggccacgcccccgtgcccgtcgcgccggaggcgtcgccgtcgacgacgaccaccggcaccacgacggacagatcacgtacgggattgattgattaa</cdnaseq>

Protein Sequence

<aaseq>MNPQEFQFFQGVEQEMLLLSHGGGGAAAAASDDVLAYHVGVLRD KVQQLEPLVGMVVVSPAAPHGQLRRDAAAMAASSACSVLQEITAAASAVAHRLEQANA ASSASFRRGVAFADDAHAAGGVQMFAAGAHGGGQGGDDEAGASLFHHHGPPAVGAPTV FRAGATTTAAASSSGGGDDDGDGDGEVDVVELEASYLLARYTHYCQVCGKGFKRDANL RMHMRAHGDEYKTAAALTSTGAGMRAAARRCSYSCPAEGCRWNRRHPRFQALKSVVCA KNHYRRSHCPKMYVCGRCGGKQFAVLSDLRTHEKHCGELRWLCSCGTFFSRKDKLMGH VALFAAGHAPVPVAPEASPSTTTTGTTTDRSRTGLID</aaseq>

Gene Sequence

<dnaseqindica>97..1212#ttatgcaattgatgtcctttgaatctctagctagctatatagttgcaaattaaaccctagaattaagctggattagctagctaattaattagccgaatgaatccacaggagttccaattcttccagggggtggagcaagagatgctcttgctatcccatggcggtggcggcgcggcggcggctgcctcggacgacgtgctcgcctaccatgtcggggtgctaagggacaaggtgcagcagctggagccgctggtcggcatggtcgtcgtctcccccgccgcgccgcacggccagctccggcgcgacgcggcggcgatggcggcgtcgagcgcctgctccgtcctgcaggagataactgccgccgcctccgccgtggcgcaccggctggagcaggccaacgccgcctcctccgcctccttcaggcgaggagtggctttcgccgacgacgcacacgccgccggtggcgtgcagatgttcgcggcgggcgcgcacggcggcggccaaggcggtgatgacgaagccggcgcctcgctgttccaccaccacgggccgccggccgtcggcgcgcccaccgtgttccgcgccggcgccacgacgacggcggccgcgtcgagcagcggcggcggagacgacgacggcgacggcgacggcgaggtggacgtggtggagctggaggcgtcgtacctgctggcgaggtacacgcactactgccaggtgtgcgggaaggggttcaagcgcgacgccaacctgcggatgcacatgcgcgcgcacggcgacgagtacaagacggcggcggcgctgacgagcaccggcgccggcatgagggcggcggcgaggcggtgcagctactcgtgccccgcggaggggtgccggtggaacaggcggcacccgcggttccaggcgctgaagtcggtggtgtgcgcgaagaaccattaccggcggagccactgcccgaagatgtacgtgtgcgggcggtgcggcggcaagcagttcgccgtgctctccgacctccgcacccacgagaagcactgcggcgagctccgatggctctgctcctgcggcaccttcttctcccgcaaggacaagctcatgggccacgtcgccctcttcgccgccggccacgcccccgtgcccgtcgcgccggaggcgtcgccgtcgacgacgaccaccggcaccacgacggacagatcacgtacgggattgattgattaatcaacaatatattgcctgtgaaatcaattcagttcgttcgaatcaatagtgtgtgtacaactgtacatactacatataggtaggttcccatttcatgctcgaatttgaattcttaatcaatttgattggagctgagtaaatttcataaaacctcacttattacaatccaacttatacaaaaacatagggattttgacacgtggcagataactccaagtattatgatcctaaagttttataaaaccacacaccgctaaccaatttgatataccatgatgtcaaaatttgaaaatgctatatttatatgatgtagcatttaattatatgatggatctataacttataaatttgagatgcaattgtagaacttaaaagtgtggtagattaaagtcaaaatgattaatagtgtggttttgtgaaactttatagccataaatacctgggttttgtgccatgttttaaaatctctattgttttgtgcaatttagatcgtaatacatgtggttaggtgaaatttaatcatttgattatgtgccaatgtctcggtatctaaaagtaaaattagcttggtacttataactaatgctacatttgcaagttatcctatatacttaagttcatccccacatacatatatgtgccttgatttgtatggtgcatcgatcatagcatggatagtgtacaactaaaagcccacaaaaactctttgaaatattgaaatatctatactccttttaaaataaagtagtaaatggtggattgagtgtggtttagggtttattaacccttatggttttgccaccattctcatcaccaacttcctactttattttttaacagaaaaaaaaacagataagactaactagagggcacacatgttaataaagcccctcccaactttcattttccgtgagaagaaaaaaaaacggtgtagggttaaaggatttacatataagtaattaatatatgtagtaattaaaagatgatatataaaaggagtaatgattataacgggttaatatataattttcaattaaaatcctattacaatgcatatgctaggcatctaaaatggaagtgctggtgcacttctttgtccattttcatgctgtacgtgccttttctgctgctgccactgtcgcatgcaccttctttgtcgtccatatcgaaatgcaggatttaagatgatgtacaagaattcgacaacatttggtaggatttaaatttgaatctacaaaagttcctaaaaaagagaaaaaagggtgacatatgcacgtgaattttttgtgcctatccaaatgagagagattgagagaaaaaaaaaggaaagaataatgggctaagagtccattactatttattaggcctagaaagcccatttaggaggaaaaaaagagtcttttttctactttgttataatgaatgaatgttactattatggcaaagttaatgtaaaaattttctacagtattcctgcattttttagtttttctaaaatttcctacattattttacaattttcatgtattttatagattaccatcaattttcatgttttttgttagtttcacgtgtaaccgggaattatgactgtaaatccttgatttattaccagtatcgtagataattaatttgttccc</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0165200, RefSeq:Os04g0165200