Os04g0485100

From RiceWiki
Revision as of 19:54, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os04g0485100

Description

Similar to Protein phosphatase 2A B' regulatory subunit

Version

NM_001059665.1 GI:115459059 GeneID:4336207

Length

3757 bp

Definition

Oryza sativa Japonica Group Os04g0485100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:24642537..24646293

Sequence Coding Region

24642806..24643162,24644551..24645723

Expression

GEO Profiles:Os04g0485100

Genome Context

<gbrowseImage1> name=NC_008397:24642537..24646293 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:24642537..24646293 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgatcaagcagatccttggccggctgccgaggaagccagggaaggccggcgatagccgggacgccgctgggccgaacggcaatgagccgtctaactcgtacagcgtcgccaggagcgtggagcaagggaacaagaggagtggaaatggggattacgtggtgccggctgggctgacgcccaatccgatgatgaatgggactgtggtgtatcactccaacgagccgctgccggcgttcaaggacgtgccggcctcggagaagcagaatttgtttgtcaagaaggtgaacctgtgctgcgcggtgtacgatttcgcggatccgacaaagaatctgaaggaaaaggagacgaagcggcagacgcttatggaacttgttgactatgtcacttctgcaaatggcaagttctctgaagtcgtcatgtcggagattaccaagatggtgtcgattaacttgttccggagctccagccccacccctcgagagaacaaggccatcgaaggagttgatctggaggaggaggagcctctcatggacccagcatggtcacatttacagatagtttatgaggttttcttgaggtttgtcgcatcacaggagacagatgcaaagctggctaagagatacatagatcattccttcatccttaggctactagatctttttgattcggaagaccccagggaaagggattatttgaagacaatcctccatcgcatatatggtaaattcatggtgcaccgccccttcatcaggaaagcaatcaacaatattttctacaggtttatatttgaaacagagaagcataatggtgttgcagagctgctggagatcttgggcagcataattaatggttttgctcttccacttaaagaagagcacaaattgttccttgtccgggcactgatcccacttcacaagccaaaatgtgtatctatgtaccatcagcaattatcatactgcatcacacagtttgttgagaaggactgcaaacttgctgacactgttattaggggcttgctaaaatattggcctgtgacaaacagttcaaaggaggtgatgttcttgggtgaactagaagaggttctggaggcaacacagcctgcagaattccaaagatgcatggttccactcttccgtcagattgcctgtagcatgaatagctcacatttccaggtggcagagcgggcgctgtttctttggaacaatgaccacattgagaacttaattaagcagaattacaaggtgatattacccattatctttcctgcgcttgagaggaatgcaaggggtcactggaaccaagcagttcgaagcctgacactgaacgtacgcaagatcttctcagatcatgattctgcatttttcggggagtgcacacagaagttcaacgacgatgaactcaagcaggaagaatctaattcgaagcgagaagctttgtggaagcgcttagaggaagcggctgtccccagatccgacaataacaaccctgtgggcacgcctaatggcaaattcagtcaagcagctggctag</cdnaseq>

Protein Sequence

<aaseq>MIKQILGRLPRKPGKAGDSRDAAGPNGNEPSNSYSVARSVEQGN KRSGNGDYVVPAGLTPNPMMNGTVVYHSNEPLPAFKDVPASEKQNLFVKKVNLCCAVY DFADPTKNLKEKETKRQTLMELVDYVTSANGKFSEVVMSEITKMVSINLFRSSSPTPR ENKAIEGVDLEEEEPLMDPAWSHLQIVYEVFLRFVASQETDAKLAKRYIDHSFILRLL DLFDSEDPRERDYLKTILHRIYGKFMVHRPFIRKAINNIFYRFIFETEKHNGVAELLE ILGSIINGFALPLKEEHKLFLVRALIPLHKPKCVSMYHQQLSYCITQFVEKDCKLADT VIRGLLKYWPVTNSSKEVMFLGELEEVLEATQPAEFQRCMVPLFRQIACSMNSSHFQV AERALFLWNNDHIENLIKQNYKVILPIIFPALERNARGHWNQAVRSLTLNVRKIFSDH DSAFFGECTQKFNDDELKQEESNSKREALWKRLEEAAVPRSDNNNPVGTPNGKFSQAA G</aaseq>

Gene Sequence

<dnaseqindica>3132..3488#571..1743#ggaggagaaaaagtggagagctctctctctctctctctctctctctctctctctctctcgctctcgctcgccctcaagccaagaaaaggttctcctcttcgctcttgctgcttgcgctcctcacccgatctcgccattcgcgtcggcggccggccggttgcccctgccgccccggttcttggatcctagatttggctgtccggggagcggaaagggttggatttttctttttttgtttttgtttttgtttttgtttttgggagtgtgttggggaggggcgatgggggcgtcgccgccgtcgcctgatccgatgaggccccgggcggtggagtgagcggctgttcctggaccaggtctgattctccgtgctgtggttcaaatgatctgggcctcgtgttgattgggttgggggaggctgggtggtggattccttcaggtctggagatctttgtgctgttgggtgagttgggagggagctgtgggtttgtagatccctgctggttgctgcggctgatttgggtattgctagggtttttggttggctgtggtgggggggggggggggaagaagatgatcaagcagatccttggccggctgccgaggaagccagggaaggccggcgatagccgggacgccgctgggccgaacggcaatgagccgtctaactcgtacagcgtcgccaggagcgtggagcaagggaacaagaggagtggaaatggggattacgtggtgccggctgggctgacgcccaatccgatgatgaatgggactgtggtgtatcactccaacgagccgctgccggcgttcaaggacgtgccggcctcggagaagcagaatttgtttgtcaagaaggtgaacctgtgctgcgcggtgtacgatttcgcggatccgacaaagaatctgaaggaaaaggagacgaagcggcagacgcttatggaacttgttgactatgtcacttctgcaaatggcaagttctctgaagtcgtcatgtcggagattaccaagatggtgtcgattaacttgttccggagctccagccccacccctcgagagaacaaggccatcgaaggagttgatctggaggaggaggagcctctcatggacccagcatggtcacatttacagatagtttatgaggttttcttgaggtttgtcgcatcacaggagacagatgcaaagctggctaagagatacatagatcattccttcatccttaggctactagatctttttgattcggaagaccccagggaaagggattatttgaagacaatcctccatcgcatatatggtaaattcatggtgcaccgccccttcatcaggaaagcaatcaacaatattttctacaggtttatatttgaaacagagaagcataatggtgttgcagagctgctggagatcttgggcagcataattaatggttttgctcttccacttaaagaagagcacaaattgttccttgtccgggcactgatcccacttcacaagccaaaatgtgtatctatgtaccatcagcaattatcatactgcatcacacagtttgttgagaaggactgcaaacttgctgacactgttattaggggcttgctaaaatattggcctgtgacaaacagttcaaaggaggtgatgttcttgggtgaactagaagaggttctggaggcaacacagcctgcagaattccaaagatgcatggttccactcttccgtcagattgcctgtagcatgaatagctcacatttccaggtaaaatctctcatgccaacaatcaagtttcaaaattcaaatccatgtcaacttcaatcctctttgttgttcacagtccaagatatatgcagtttgctgcttaggtttctgattccattactgtgtatccacattgctctcctccacagatgatattatataatttgcttcatcagtttaaaaaagatcaagctttggtgttcatctaccttttctggtgaaccatggagctgcttttgacatatgctaatctggaattatatttaaaaaatcaccaagatgttttatacttcttgagcatttgttttcttaagaaattctgttggtacttgttagtttgaaaatttacaatgctagggcattctaaacatcagcatatcatttttttgtatatatatgccaatcttctggagggtacataccaccaatttattcatttttactacactcatttttgttatcttgcttgaaatccttattacaattgatatgtacccttgctaatcattataggggcatgaaatttcttgtttatctctatcctgctatcctacccatgtgcgtcccctgaataatctgtgattgcagatttaggtgcttgttaccttctagaatcttacatgctcctccaaaaaggaaagaaaatttgcatgccaatctgtaattttacaagattagaaagacattctgtactgtggaagctgattgttgagtgcaagctgttaattttatctgaacatagaactactgctactccaagatactaagtcaccaaaattagaacttggtggtgttaggttaaagaggaaacatgccacccaaataattatgtatgtctatgaaaagatggtgcgactctttgttgccctttttgttttggtttgtatttggattaattatgcatgtttttaacatattcttatcctgctttaggaaagtataatgtctgttttacaagaaacatagtgtcttattgaagtcattagttagttttggttatctatatttgccaactgctggttgcaaatcatgccagaaacaggtcttagacttgtattcaggattactttctctttttttttctttttttgctatcttgctatgtaaataacatttatcttgcaagctgctactcatctatctagcaaaataatgcagtgccttggtaccatctgttgtcttggaatggtattttatgtctatcatgttggtccagtggttctgcctagttatatgtgatttgctgaagcatttttgtagtttattaaacatttcctgtagatggatgcctagatacttggtgacatctgagaaacatattgagaaattagtgtgtttagaaaaacatatagcctggcttaccttttcttttccttgtctgttcctaggtggcagagcgggcgctgtttctttggaacaatgaccacattgagaacttaattaagcagaattacaaggtgatattacccattatctttcctgcgcttgagaggaatgcaaggggtcactggaaccaagcagttcgaagcctgacactgaacgtacgcaagatcttctcagatcatgattctgcatttttcggggagtgcacacagaagttcaacgacgatgaactcaagcaggaagaatctaattcgaagcgagaagctttgtggaagcgcttagaggaagcggctgtccccagatccgacaataacaaccctgtgggcacgcctaatggcaaattcagtcaagcagctggctagaaaataccatagcaattacagtcttgcaatcctttaaccccatgtgcgattctctggaacttggtttgtgattttagtgttgaaaattttttgttggtgagttggtttcccccttgttctaggcgggtaggatgtctttggtttcctgagaactgcatgatgaaaaatgtacacatacagaagaatttctgcgagctttgccctatgtgtagtcacattaatcagaattatcatatagttgaataaacagtgttaagtttctgttgcgg</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0485100, RefSeq:Os04g0485100