Os04g0490800

From RiceWiki
Revision as of 19:55, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os04g0490800

Description

2-phosphoglycolate phosphatase, eukaryotic family protein

Version

NM_001059702.1 GI:115459133 GeneID:4336245

Length

2518 bp

Definition

Oryza sativa Japonica Group Os04g0490800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:24926534..24929051

Sequence Coding Region

24926726..24926832,24926921..24927024,24927137..24927236,24927318..24927415,24927712..24927764
,24927838..24927897,24927977..24928048,24928191..24928262,24928354..24928446
,24928549..24928616,24928697..24928967

Expression

GEO Profiles:Os04g0490800

Genome Context

<gbrowseImage1> name=NC_008397:24926534..24929051 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:24926534..24929051 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgctcctgacgcgcgcctcccccaccttcctcccctccacctccgccgcctcgccctcgccgcagcaggcgccgtcctccccgaccttcgggaggagccagtaccgccggggaggtggattggtctccgtttcttctccggtggccggtcagcgctgtgctgccaggaggaggtccgtgatggcggcggccggcgcggtccccgcggcgaagctggagaacgccgacgcgctcatcgactccgtcgagacgttcatattcgattgcgacggtgtgatttggaagggcgacaagctgatcgacggagtgccggagacgctcgacatgctcagatcaaagggcaagaggctggtgttcgtgacgaacaactcgaccaagtcgaggaagcaatacgggaagaagtttgagacgctgggactaaacgtcaatgaggaagagatcttcgcttcgtcgttcgcagctgccgcgtacctgcagtccatcgatttccccaaagacaagaaggtttatgtgattggagaggacgggattctgaaggagctggagctggctggatttcagtacctcggcgggccatctgatggagacaagaagatagagctgaagcctggattttacatggaacatgacaaagatgttggagcagttgttgtgggattcgatcgctattttaactactacaaagtacagtacgggacactgtgcattcgtgagaatccagggtgccttttcattgccacaaaccgggacgccgtcacccatcttactgatgcccaagagtgggcaggtggagggtcaatggttggtgcaattcttggttcaactaaacaagaaccgctcgttgtcgggaagccgtcaacattcatgatggactacctggcaaagaagtttgggatcacaacatcccagatatgcatggttggtgaccgtttggataccgacatcttgtttggccaaaacggaggttgcaaaactcttctggtcctttcaggtgtcacttctgtacagatgcttcagagccctgacaactcgatccagccagatttctacacaaaccaaatttctgattttctcaccctcaaagcagcaactgtctga</cdnaseq>

Protein Sequence

<aaseq>MLLTRASPTFLPSTSAASPSPQQAPSSPTFGRSQYRRGGGLVSV SSPVAGQRCAARRRSVMAAAGAVPAAKLENADALIDSVETFIFDCDGVIWKGDKLIDG VPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLNVNEEEIFASSFAAAAYLQS IDFPKDKKVYVIGEDGILKELELAGFQYLGGPSDGDKKIELKPGFYMEHDKDVGAVVV GFDRYFNYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAILGSTK QEPLVVGKPSTFMMDYLAKKFGITTSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTS VQMLQSPDNSIQPDFYTNQISDFLTLKAATV</aaseq>

Gene Sequence

<dnaseqindica>2220..2326#2028..2131#1816..1915#1637..1734#1288..1340#1155..1214#1004..1075#790..861#606..698#436..503#85..355#gaaaccgaaacgacaccaaccaaccaaacagacgccaccggataaacaaaaacgcacgtagcagcagcagcagcagcagccgcgatgctcctgacgcgcgcctcccccaccttcctcccctccacctccgccgcctcgccctcgccgcagcaggcgccgtcctccccgaccttcgggaggagccagtaccgccggggaggtggattggtctccgtttcttctccggtggccggtcagcgctgtgctgccaggaggaggtccgtgatggcggcggccggcgcggtccccgcggcgaagctggagaacgccgacgcgctcatcgactccgtcgagacgttcatattcgattgcgacggtgagatggcacactgatcgctcgatggtttgattgattgtgattttgttatgaatttcgcgttctttttgtttgcgtaggtgtgatttggaagggcgacaagctgatcgacggagtgccggagacgctcgacatgctcagatcaaaggtccgtcgcaaactgcaatgatcttctcgaactccgagtccaacttagcattagcaatctgctggagttgaagctgatgatgatggggttgtggcgttgcagggcaagaggctggtgttcgtgacgaacaactcgaccaagtcgaggaagcaatacgggaagaagtttgagacgctgggactaaacgtcaatgaggtaggattcatgccatgaactgccaatttttctttgccaaattttcttgtccaaccaatctggtctgatgagcctggaacgctctacgcaggaagagatcttcgcttcgtcgttcgcagctgccgcgtacctgcagtccatcgatttccccaaagacaagaaggtatctaatctatatcatcatcttcagaagttttaacatgttttggtgcaaagatacgcgcacaacgttaccatttttactgttcatgttcagcaattttggcaaataatatttgcgcaaggttaacatttttattgttcaggtttatgtgattggagaggacgggattctgaaggagctggagctggctggatttcagtacctcggcgggccagtaagttataaaatttctgaacccatgttcagtgctgcattcctgggacagattaacacacataacaatcatcttgcagtctgatggagacaagaagatagagctgaagcctggattttacatggaacatgacaaagatgtaactacgatccctactttggtttgcagtaaaatgcgatcattgcactgagaaccatttggatttgtcacaggttggagcagttgttgtgggattcgatcgctattttaactactacaaagtacagtaagtttcttcttctttcctccattgtcaagaagacatgaacatatatgtaaggcaagcagaatcagattagtagttctatcataatcatgcatccatttgataattgatgcatgcaagatgcctcagatgatgaattgatgattgcagttctttaccaatgttgaccaatgctgtctgcctgtgttgccaaatcacatcttagctctcgtgttcatgtaaataagtttggcattaaccaaaaccaatacaaaagatttgctaacttacaagttacaactaatcaacttctgaaggtacgggacactgtgcattcgtgagaatccagggtgccttttcattgccacaaaccgggacgccgtcacccatcttactgatgcccaagagtgggcaggttagtcaggcattccagctcttcctacattagaatatgatggataaatgcttaagatgatgaagattttgccttcaccaggtggagggtcaatggttggtgcaattcttggttcaactaaacaagaaccgctcgttgtcgggaagccgtcaacattcatgatggactacctggcaaagaagtgagaggccaactgtctcagcagcagtcatgtttcatccatcggtatcagaaatgtagctggatggatggtttcagattcttacctttcttctcgtttacctctgtggcaggtttgggatcacaacatcccagatatgcatggttggtgaccgtttggataccgacatcttgtttggccaaaacggaggttgcaaaactcttctggtcctttcaggttccttgatcctcctctccttctgaactatgcatgctctgctgattttatgttagtacaagcaccaagtgttggatgcattttgcaggtgtcacttctgtacagatgcttcagagccctgacaactcgatccagccagatttctacacaaaccaaatttctgattttctcaccctcaaagcagcaactgtctgaagaaatgggaagtaaatgtgttacagatgggcgaggccccttacttttgtataggcggcatccgccaatttttagcaactaaggtcacaaggatgctttttctttccacattgttttgtaaccatgagacaaatgtttatacactattatatgtaacacaagtgcatatcacaatggatactattgaccact</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0490800, RefSeq:Os04g0490800