Os04g0543200
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Contents
Annotated Information
Function
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Expression
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Evolution
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References
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Structured Information
| Gene Name |
Os04g0543200 |
|---|---|
| Description |
RNA-binding region RNP-1 (RNA recognition motif) domain containing protein |
| Version |
NM_001059988.1 GI:115459705 GeneID:4336550 |
| Length |
5238 bp |
| Definition |
Oryza sativa Japonica Group Os04g0543200, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 4:27598840..27604077 |
| Sequence Coding Region |
27599069..27599309,27599825..27600348,27600431..27600520,27600596..27600835,27600922..27601143 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008397:27598840..27604077 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008397:27598840..27604077 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atgccgccgaaggctaggaggggcgccgcggcggcggggaggaaggggccagggacgaggggccggctggtgaaggcgcaggcggccgtggaggaggtgcccgccgaggaggttaaggctgcggaggaggccccgaaggtggaggagcagaagcgccagccgtcaccgccactgcagcagccggccgcggaggagaaggcctcgtccgacgctgcagcgaacggcgcgagccacggtgaagatgagggaactacaaaagaaacatatgaagaggataaaggtgaacgattggaatttgaagatgaaccagaatatgaagaggaggctgctgtggactacgatgagaaggacttggagcaatatgaagagcaatacgaggatggtgatgaagtggtggaatatactgaagatgtgattgaagaggagacggatatggtagacgaggaattggatggtggggacgatggggagggtgaaggatatgaaaatgccgaagaagagcataatgtggatgtggaggatgaagagcatcatgaaatggtgaaagagcatcgcaagcggaaggagtttgaagtttttgttggtgggcttgataaagatgcaacagaaagcgatcttaggaaggtttttggtgaagttggcgagatcactgaagttcgtttgatgatgaaccctgttacaaagaaaaataaaggctttgcctttctgcgatatgcgactgtagaacaagcaaggcgggcggtgtcagagctaaagaatccttcggtgagaggcaaacaatgtggtgttgctcctagtcatgacaacgatactctttttgtgggcaatatctgcaagacatggactaaagaacatctgaaggagaaactcaagagttacggtgttgagaattttgatgatctactattagttgaggacagcaataatccaggaatgaatcgtgggtatgctttacttgagttttctactcgccctgaagcaatggatgcttttaggcgattgcagaagagggatgtagtttttggagttgatcgtagtgcaaaggtttcctttgctgattcctaccccgaagttgacgatgaaataatggcacaggttagaactgtatttattgatggccttcctccctcatgggatgaagatcgtgtcaagaagtaccttaaaaaatatggagctattgagaaagttgaactagcccgaaatatgccagcagccaagagaaaggattttgggtttgttacttttgatacacatgataatgctgttgcatgtgctgatgggataactaattctgagattggtgaaggtgacagcaaggcaaaagtgagagccagattgtcgagaccattgcagagacctcctagaatgaagcatggattaagaggaaattttagggttgggcagggtgctcctcgaggtggacgttttgcatatgatcgtcctcctccacttcgccggcctccacctcgtcttttaagacccgatgttagtcgcttaccaccaccggtcaggagccgcccactgaagaggccagtagatattagagataggcgccctgttatgtcaataccagatagagttaggcgtttgcctccacccgagagatcatatgacagaaggcccccagctcctgtgtacccaaagagaagcccaaggagagaatatggaaggcgtgatgaacttcctccgccaagaagcagagctacctttggtgactatagttcaagagttccagtggatagacgcccctatagggatgattattcaccccgggggtcagcctattcggacctaggtcctcgtagtgctccccgcctttctgataggcgagcatatattgatgatggttatggagggaagattgaccgtcctttaccaacatatagggagggccgtggtcgtgattatgatacaatgtctggttcaaaacgctcatatgctgagatggatgatgtgccacctcgatatcatgacattagtgttcgtcagtctaaggcacgcttagactatgatgttggtggcagcagtgcccggtatgcagatacatatagcgagaggcttggacgatcacatgcgggatacagtggtggcagatctgtctctggtcatgatccagtgtacagtagtggtcggcatggcatgagttatggaggttccgcaagcagtaatgatgctggtggaatgtactcatcaaatttcagtggtagctacatgtctcgtgggtctgatgttggtggaagttcatattcatcactttactcagggcgtaatgtaggtagcagcagtggctactatggcggtagtggttctagttcatattactga</cdnaseq> |
| Protein Sequence |
<aaseq>MPPKARRGAAAAGRKGPGTRGRLVKAQAAVEEVPAEEVKAAEEA PKVEEQKRQPSPPLQQPAAEEKASSDAAANGASHGEDEGTTKETYEEDKGERLEFEDE PEYEEEAAVDYDEKDLEQYEEQYEDGDEVVEYTEDVIEEETDMVDEELDGGDDGEGEG YENAEEEHNVDVEDEEHHEMVKEHRKRKEFEVFVGGLDKDATESDLRKVFGEVGEITE VRLMMNPVTKKNKGFAFLRYATVEQARRAVSELKNPSVRGKQCGVAPSHDNDTLFVGN ICKTWTKEHLKEKLKSYGVENFDDLLLVEDSNNPGMNRGYALLEFSTRPEAMDAFRRL QKRDVVFGVDRSAKVSFADSYPEVDDEIMAQVRTVFIDGLPPSWDEDRVKKYLKKYGA IEKVELARNMPAAKRKDFGFVTFDTHDNAVACADGITNSEIGEGDSKAKVRARLSRPL QRPPRMKHGLRGNFRVGQGAPRGGRFAYDRPPPLRRPPPRLLRPDVSRLPPPVRSRPL KRPVDIRDRRPVMSIPDRVRRLPPPERSYDRRPPAPVYPKRSPRREYGRRDELPPPRS RATFGDYSSRVPVDRRPYRDDYSPRGSAYSDLGPRSAPRLSDRRAYIDDGYGGKIDRP LPTYREGRGRDYDTMSGSKRSYAEMDDVPPRYHDISVRQSKARLDYDVGGSSARYADT YSERLGRSHAGYSGGRSVSGHDPVYSSGRHGMSYGGSASSNDAGGMYSSNFSGSYMSR GSDVGGSSYSSLYSGRNVGSSSGYYGGSGSSSYY</aaseq> |
| Gene Sequence |
<dnaseqindica>230..470#986..1509#1592..1681#1757..1996#2083..2304#2406..2715#2810..3129#3218..3327#3415..3509#3613..3689#3802..3897#gtgttgcctcccaccgcaatctcgtttcggctctccggccctctcctagggtttcgattcctcgccccctcgatcctcgacgacgcgaggtgcgtacgcccatggattctatagcctcgccttccctcctcgattcgatccttggtccatctaaatccgtcgtctttgtttggtgatctgcaggtggttttccttttttttttggttttgtttgtgagagtggggggagatgccgccgaaggctaggaggggcgccgcggcggcggggaggaaggggccagggacgaggggccggctggtgaaggcgcaggcggccgtggaggaggtgcccgccgaggaggttaaggctgcggaggaggccccgaaggtggaggagcagaagcgccagccgtcaccgccactgcagcagccggccgcggaggagaaggcctcgtccgacgctgcagcgaacggcgcgagccacggtgaaggtattgcttgcttcttcttcttctttcttttttttttttggtatagatcgtttatgttgggttgtactatgtcagttttttggtatattaagatgattgctgcattagtgtatttttatgtggggtgcaatgaacgtccgaagtagcatgtcatggatgtcttgttatattgactgttttccatttaatcctggttagcattgcttatggtcgcatggtttgcagttggaatattagatctatgagatcatttagtactgttccaacggttggtctttgattcagtctgagtacatggcattgcccttcaacaaacagcaacattgatctttcctagttttatgcaagcaaaacatagtgagaaccactcttaataaaacattgaagatcatatgtttatggcaaaacataaaagatcgtatgtttatactttatactcatggctgtttttttggctatatttttattggatagcagttgcccatgtagtaaggttgtacttatttcatttttagatgagggaactacaaaagaaacatatgaagaggataaaggtgaacgattggaatttgaagatgaaccagaatatgaagaggaggctgctgtggactacgatgagaaggacttggagcaatatgaagagcaatacgaggatggtgatgaagtggtggaatatactgaagatgtgattgaagaggagacggatatggtagacgaggaattggatggtggggacgatggggagggtgaaggatatgaaaatgccgaagaagagcataatgtggatgtggaggatgaagagcatcatgaaatggtgaaagagcatcgcaagcggaaggagtttgaagtttttgttggtgggcttgataaagatgcaacagaaagcgatcttaggaaggtttttggtgaagttggcgagatcactgaagttcgtttgatgatgaaccctgttacaaagaaaaataaaggctttgcctttctgcgatatgcgactgtagaacaagcaaggcgggcggtgtcagagctaaagaatccttcggttggtctaaagatatggatattttatattatggtgtgttattattataagtaataatctcataattcattaaatgctgtaggtgagaggcaaacaatgtggtgttgctcctagtcatgacaacgatactctttttgtgggcaatatctgcaagacatggactaaagaacatgtaagatgctgaaacagtttttcttttttcctattctgttgttacctgaataataacttatttgggcatgtacagctgaaggagaaactcaagagttacggtgttgagaattttgatgatctactattagttgaggacagcaataatccaggaatgaatcgtgggtatgctttacttgagttttctactcgccctgaagcaatggatgcttttaggcgattgcagaagagggatgtagtttttggagttgatcgtagtgcaaaggtttcctttgctgattcctaccccgaagttgacgatgaaataatggcacaggtaaccacttattttggtgcttttgtttgttgatgttgcaaatttgattaaatctgttgaatccttattctggttctttggttcaggttagaactgtatttattgatggccttcctccctcatgggatgaagatcgtgtcaagaagtaccttaaaaaatatggagctattgagaaagttgaactagcccgaaatatgccagcagccaagagaaaggattttgggtttgttacttttgatacacatgataatgctgttgcatgtgctgatgggataactaattctgagattggtgaaggtgacagcaaggtctgtttccccaactgagtttgatgggtcttttttactgtctactcattctgttggacatgaactaatattacacaacaccttgctacttgatggttcaggcaaaagtgagagccagattgtcgagaccattgcagagacctcctagaatgaagcatggattaagaggaaattttagggttgggcagggtgctcctcgaggtggacgttttgcatatgatcgtcctcctccacttcgccggcctccacctcgtcttttaagacccgatgttagtcgcttaccaccaccggtcaggagccgcccactgaagaggccagtagatattagagataggcgccctgttatgtcaataccagatagagttaggcgtttgcctccacccgagagatcatatgacagaaggcccccaggtgtgcagatgttatgtgcaatctattctctctctctcttcttttgctgtgcaaaccactgtaggtcactttttcatacttcatctgtttacagctcctgtgtacccaaagagaagcccaaggagagaatatggaaggcgtgatgaacttcctccgccaagaagcagagctacctttggtgactatagttcaagagttccagtggatagacgcccctatagggatgattattcaccccgggggtcagcctattcggacctaggtcctcgtagtgctccccgcctttctgataggcgagcatatattgatgatggttatggagggaagattgaccgtcctttaccaacatatagggagggccgtggtcgtgattatgatacaatgtctggttcaaaacgctcatatgctgagatggtgagggcagttaattattgttctcttgtgtttcatgctttctcctcatattcctcagccaactaagacattgctattgttatgtcaggatgatgtgccacctcgatatcatgacattagtgttcgtcagtctaaggcacgcttagactatgatgttggtggcagcagtgcccggtatgcagatacatatagcgagaggttggtgtacattttgaaatgttccttctctttgcttatatatatatatattttaatatcttacctgtacattgcttgtttttgaaggcttggacgatcacatgcgggatacagtggtggcagatctgtctctggtcatgatccagtgtacagtagtggtcggcatggcatgagttatggaggtatatgctcttgaacgctctgttgtgttagggtacctgtgctcacgtgctcaatatatattagatatctattctcacaccatttggtgtttcaccttttcaggttccgcaagcagtaatgatgctggtggaatgtactcatcaaatttcagtggtagctacatgtctcgtgggtctgatgtgagtcttcatcaaaatgttatctccagctcattatctatatcaatttttgttggcccaagctttctatcatgttggtttccccaatttattcatatttctctttgtgcaggttggtggaagttcatattcatcactttactcagggcgtaatgtaggtagcagcagtggctactatggcggtagtggttctagttcatattactgaggtgcgtgttcaatctgaatctgctctgtttctccttgagtttaaaattgtcctgcataaaagttttcattgatgtctcacaccaccaccaccaccatcgctgccatcatcgtcttaactgctcacttcagagaaggcaaatgcttccccttctatcaaacaaggaacaccctccgtgatcaaccatgaattgttttgatggtacagattttgcatcatatcgtctatggaacacacatggcaccgtaggaggttggtgtaggccccggattgtatggagctccttaatttaaggcctacggacctggacaagaagtggcaattgtgtgtggtgctcctgaattagacatgatcaaagaagtcagaaacaccaagttggttaaagcaatagtcttgtggatgttctggctagtttctttaatgtaaggctttgctttatttggtcaagaattgtgaacataatcgccagctatggtatcttggcatgtttacttccagtgtttctaaacatttttgagagatatggagtgtttcagtaaaatagtattatgaggtagttccctgaaatacatggtgccttgaagatctcttgtgatgtgctggctgaagatcagacttacaaatgaagccttagaagggggcgctttgtgtaaggctgttacttctgaaacatttggcatctgctctctagtggtttggtaatttgctgtgccaaaagatgattggtcagactgaaactctggactagttatttggtaactgctgaaaaattggatttgttggttgctgaaattgggagaaaccatttatatggctcaaagtagttctttcaccaagcgattacctaggccttgccataataagtttaagataacagaacctgcagttacagaactatgattatggtcttggattgccgctgttgattagcagcagcatagaattcagggcacccaggtatatctaacaagcaatgccatcattgagcacaacatttcacttgctactcgtttctgtaatttctgtcaagtgctgcatggagcatggataatatatctttgggaaagaagtggtaattggacaattgcaaactttgaagaaatttgcaggaagcatgaagcatgatgcactgactaaataagtttcagaaaaaaataaatatggttttgctatgacacctatgtttgatttaccatcatgataacatgatagttatggtatatttgggccctttatcccattagatggagatatatttgggccaaatttcttacaaccaaatttattttgtaacaattttttgtaaatagacaattttaccaagatattaacgcattaggg</dnaseqindica> 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