Os04g0582400
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Annotated Information
Function
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Expression
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Evolution
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Structured Information
| Gene Name |
Os04g0582400 |
|---|---|
| Description |
Reverse transcriptase, RNA-dependent DNA polymerase family protein |
| Version |
NM_001060193.2 GI:297603235 GeneID:4336771 |
| Length |
4364 bp |
| Definition |
Oryza sativa Japonica Group Os04g0582400, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 4:29817603..29821966 |
| Sequence Coding Region |
29817603..29818712,29820836..29821375,29821826..29821966 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008397:29817603..29821966 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008397:29817603..29821966 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atgtcggctccaacgccgcgtgtgtcgcggtcccgtgaaccgcaccagcgacgtatctcccgttcacctccacaccgtcgtggtcgccggcggcctggcgaagaccgtgaacttattccggtccagtgtgtggtgaaggagatcgctttgtccattgagacgttgcttgacctcgatgagctcacgctcgaggaggtcaccggccggctccgaaacgctgaggagaagctgcctgccaagagctctgctgccggtgggaaactgtttctcactgaggagcagtggactgcccggtggaaggagaaacaggccgcggaaagttcctctgggaaggcgaagtccggcggtggcaaccgtcgtcggcgtggtggcaagaagaaagctgaagctgctgcgcacgatggagatcgtgccgggcgcgacacgcaggaagggcgggaaccaaaccgcgacaagtgccgcaattgcggccgcacggggcactgggctaaggactgccggcagcccaagcggcctgccgaggcctaccaggccctggcggatgaggacgatgacgagccggccctcctcatggcccatgtcgtcgacgctgctcctgtgtctgcgtcgtcttcatctgcgccacctgcttcttcgccgccatcgcagcctgacaagacgatcgagctcgtcgagccaaaggcgctgtacgggctgcgccaagcgccccgtgcgtggaactccaagctcgaagccaccctgctgtctctcggcttccggcggaacgactgcgaacatgcggtctatgttcgaggtaacaccagtgcacggttgctcgttggtgtttatgtcgacgatctaatcatcacagggacaaaggaggatgagatcgttcgattcaagggcgaaatgaaggcgttgttcaagatgagtgacctcgggcttctcagtttctacctgggtatcgaggtcgagcaggtggcgggcagcatacggctgtcacaggcagcatacgcacgccgtatccttgagcgagcagggatgctgggatgcaacccgagcgccacgccaatggaacaacgcctcaagctcagcaaaaccagtgctgcggcgtcggtgaaccccacctggtaccgtggcatcgttggctgtttgcggtatctggtacatacgaggccggatatcgcgttctcggtgggctacgtgagccgcttcatggaggcgcccaccaccgagcacgaagcggcggtgaagcgcatactgcgctatatcgccggcacgacggagttcgggtgtcactaccaccagtccagcagccccgttcagttggtgggatacagtgacgcggacatggccggcgacccagacacgcgcaagagtacgaccggtgttgtcttcttcctcgggacaagcccggtcagctggcaatccgtcaagcaaaaggttgtcgcgctttcgtcttgcgaggcggagtacatcgctgcgacaacggctgcatgccaaggcgtctggctctctcagttgctaggagagatcaatcaagaagagccggacgcgttcaagcttctcattgataacaaatcagcaattgccctcagcaaaaatccggtgttccacgagaggagcaagcacatcgctacccgctaccactacattcgagaacgggtggaagatggctccgttcatgtcgagttcgtcgggactgaggggcagattgcagacattttgaccaaggcacttgggcgcacacgttttcaggagcttcgctcccgcattggcgttgccgacgtcaaattcaggtgcaagacttag</cdnaseq> |
| Protein Sequence |
<aaseq>MSAPTPRVSRSREPHQRRISRSPPHRRGRRRPGEDRELIPVQCV VKEIALSIETLLDLDELTLEEVTGRLRNAEEKLPAKSSAAGGKLFLTEEQWTARWKEK QAAESSSGKAKSGGGNRRRRGGKKKAEAAAHDGDRAGRDTQEGREPNRDKCRNCGRTG HWAKDCRQPKRPAEAYQALADEDDDEPALLMAHVVDAAPVSASSSSAPPASSPPSQPD KTIELVEPKALYGLRQAPRAWNSKLEATLLSLGFRRNDCEHAVYVRGNTSARLLVGVY VDDLIITGTKEDEIVRFKGEMKALFKMSDLGLLSFYLGIEVEQVAGSIRLSQAAYARR ILERAGMLGCNPSATPMEQRLKLSKTSAAASVNPTWYRGIVGCLRYLVHTRPDIAFSV GYVSRFMEAPTTEHEAAVKRILRYIAGTTEFGCHYHQSSSPVQLVGYSDADMAGDPDT RKSTTGVVFFLGTSPVSWQSVKQKVVALSSCEAEYIAATTAACQGVWLSQLLGEINQE EPDAFKLLIDNKSAIALSKNPVFHERSKHIATRYHYIRERVEDGSVHVEFVGTEGQIA DILTKALGRTRFQELRSRIGVADVKFRCKT</aaseq> |
| Gene Sequence |
<dnaseqindica>3255..4364#592..1131#1..141#atgtcggctccaacgccgcgtgtgtcgcggtcccgtgaaccgcaccagcgacgtatctcccgttcacctccacaccgtcgtggtcgccggcggcctggcgaagaccgtgaacttattccggtccagtgtgtggtgaaggaggtgggcggctcagccaactatccactgctgacgaagactaactacggagattgggctctcatgatgaaggtcatgctgcaagcgcgcggcctgtgggatgccgttgagcatggtgatgccgatttccaggcggatcgaatggcgatggaggccatactccgggcgatgccgccggagatgttagcttcactcgccgtcaagccctcggccaaggaggcgtgggacgcgatcaagacgatgcgagttggcgtcgatcgtgtccgcaagtcgaaggcgcaaatgctgcagaagcagtatgatgcgatggagttcaaggacggggagaccgtcgaggaattctcgttgcgcctcaacggactcgtcaccaacctcgccacgcttggagtccatcttgaagaaggaaaggtggttgaaaaattccttaactctgttccagatcatctctcgcagatcgctttgtccattgagacgttgcttgacctcgatgagctcacgctcgaggaggtcaccggccggctccgaaacgctgaggagaagctgcctgccaagagctctgctgccggtgggaaactgtttctcactgaggagcagtggactgcccggtggaaggagaaacaggccgcggaaagttcctctgggaaggcgaagtccggcggtggcaaccgtcgtcggcgtggtggcaagaagaaagctgaagctgctgcgcacgatggagatcgtgccgggcgcgacacgcaggaagggcgggaaccaaaccgcgacaagtgccgcaattgcggccgcacggggcactgggctaaggactgccggcagcccaagcggcctgccgaggcctaccaggccctggcggatgaggacgatgacgagccggccctcctcatggcccatgtcgtcgacgctgctcctgtgtctgcgtcgtcttcatctgcgccacctgcttcttcgccgccatcgcagcctgacaagacgatcgagctcgtcgagccaaaggtgttcgcgcaccttctcacggagaaacaaaccgacggcggcgtctggcatctcgacaccggagcaacaaaccacatgacgggcattcgcgaagttttcgctgagctcgacctgtctgtgcggggctcggtgcgattcggcgacggctccgtcgtcggaattgagggtcgtggcaagatcatttttgagtgcaggaatcaggagcaccgagcgttgacgggggtgtattacatccctaaactcaacgccaacttgataagtttgggccagctcgatgaaaatgggtgcgacgtccgtatctaccacggtgtttgcacgatacgggacccggcggcccagctgctcgcacgcgttcagcggacgcggaatcgcctgtacttgatcaagctcaccattgggcaaccggtgtgcctcgcggccaaggcgcaggagtgcgcctggctgtggcatgcgcgctacggccacctccacttcgacgctctgcgacgactggcgagccgcgacatggtgcgcggcatgcccgacatcgatcatgtcgagcagctgtgcgacagctgcgtcatatctaagcagcgacgcaccccgtttccacgccgctccatgtttcgtgctgaggatcgccttgagctggtgcatggcgatctgtgtggtcccatctcgccggcaacccctggaggcaagactcatttcctcctgcttgatgatgcgagcaggtacatgtggatcactctgctgggatgcaagagcgaggcggctgatgccatcaagcgctttcaggcgcgagccgaggcggaatccaagcagaaactgcgcatcctccgcaccgacaacggtggcgagttcacctcggtggaattcgccacctactgcgccgaacagggagtctcacgccacttctccgcgccctactcgccccaacagaatggcgtggtggagcgccgcaaccaaaccatccttgggatggctcgcagcttgttgaaagccaagaacatgccggcacgctattggggggaggctgtcacgacggcagtttttctgctcaatcgcgcgccgacaaagagcttggccaacatgacaccttatgaggcgtggcatgggaagaagccggcggtgggttacctgcgcacgttcgggtgcctggcctatgtcaaggacgtgcggcctcacctccccaagctctctgaccgcagcaagccgatggttctcatcggatacgccgacggagccaaggcgtacaaggtgttcgatccggtgtctggacgagtgcaggtctcgcgcgacgtgattttcgacgagggcgctgggtgggactgggatgcggcgggcgctgcagccgtccccggcggcggaggttgctcagacttcaccgtcgagtacctgacaacgggcacatcaccgtcggcttcgacctcggctccatcatctgcatcttcgggcgcttccgcgtcaagggcattcacgccgtcgtcgtcgtcgacacccgccaccttggcgtcggcctcaaacgccctctacaccgacattcgtctcaccgccaccaggcatcgacgagaacctggactcggagcaggatgattgtccactgctgttatcgcagtatgggtgatctactgggcgacgcacttacgcctgggttcgcaacccgggatccggaggagggggagcttcatctccttgcggccgaggaaccagcctcgttcactgaggctgaacagcggcaggagtggaggcgggctatgctggatgaaatcgcctcaattgaggagaacaacacatggcgccttgtcgatctcccgtccggccatcgtgcaattggcctcaagtgggtcttcaagctcaagaaggatgcagaaggcagagtggcaaagcacaaggctcgcctcatcgcgaaaggctatgtgcagcaacccggcatcgactttgaggaagtgttcaccccggttgcacggctggaatctgttcggttgttgctcgctcaggccgcgcaggcaggctggacagtgcaccatatggacgtcaagtccgcgttcctcaacggtgagctagccgaggaggtctacgtcaagcagccgcccggtttcgtcaaggaaggccgtgaacaccaagtccttcggcttgacaaggcgctgtacgggctgcgccaagcgccccgtgcgtggaactccaagctcgaagccaccctgctgtctctcggcttccggcggaacgactgcgaacatgcggtctatgttcgaggtaacaccagtgcacggttgctcgttggtgtttatgtcgacgatctaatcatcacagggacaaaggaggatgagatcgttcgattcaagggcgaaatgaaggcgttgttcaagatgagtgacctcgggcttctcagtttctacctgggtatcgaggtcgagcaggtggcgggcagcatacggctgtcacaggcagcatacgcacgccgtatccttgagcgagcagggatgctgggatgcaacccgagcgccacgccaatggaacaacgcctcaagctcagcaaaaccagtgctgcggcgtcggtgaaccccacctggtaccgtggcatcgttggctgtttgcggtatctggtacatacgaggccggatatcgcgttctcggtgggctacgtgagccgcttcatggaggcgcccaccaccgagcacgaagcggcggtgaagcgcatactgcgctatatcgccggcacgacggagttcgggtgtcactaccaccagtccagcagccccgttcagttggtgggatacagtgacgcggacatggccggcgacccagacacgcgcaagagtacgaccggtgttgtcttcttcctcgggacaagcccggtcagctggcaatccgtcaagcaaaaggttgtcgcgctttcgtcttgcgaggcggagtacatcgctgcgacaacggctgcatgccaaggcgtctggctctctcagttgctaggagagatcaatcaagaagagccggacgcgttcaagcttctcattgataacaaatcagcaattgccctcagcaaaaatccggtgttccacgagaggagcaagcacatcgctacccgctaccactacattcgagaacgggtggaagatggctccgttcatgtcgagttcgtcgggactgaggggcagattgcagacattttgaccaaggcacttgggcgcacacgttttcaggagcttcgctcccgcattggcgttgccgacgtcaaattcaggtgcaagacttag</dnaseqindica> |
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