Os10g0131100

From RiceWiki
Revision as of 21:05, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os10g0131100

Description

Disease resistance protein family protein

Version

NM_001070636.2 GI:297610067 GeneID:4348039

Length

8297 bp

Definition

Oryza sativa Japonica Group Os10g0131100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:1881309..1889605

Sequence Coding Region

1881309..1881346,1882399..1882519,1883316..1883384,1883491..1883594,1884572..1888339
,1889587..1889605

Expression

GEO Profiles:Os10g0131100

Genome Context

<gbrowseImage1> name=NC_008403:1881309..1889605 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:1881309..1889605 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggtgctcgacgaaatggttgtgagcgcaacaatggctgaggttgttatcggaccactagtttccatggtgaaggagaaggtttccagctaccttctagaccagtacaaggttatggaaggcatggagcagcagcgcgagatcctggagcgcaagctgcctgccatcctggatgtcattgaagatgcggaggagaagggagcttttcgacctggagtaagcgcttggctcagagcactcaagaaggtggcctatgaggcaaatgatgtctttgatgaattcaagtacgaagccctccggcgcgacgcaaggaagaaggggcagttcaacatgctcggcatggacgttgtaagcctctttccttcttataaccctatcatgtttcgtaataagatgggtaagaagctacaaaagattgtggggagcattgaggtccttgtctcagagatgaactcctttgggttcatacaccggcagcaagctccaccatccaatcaatggcgtcaaacagattctataatggctgactctgagaaggatattataagaagatccagagatgaggagaaaaagaagattgtgaagatattgcataatcatgctagcagcaatagggatctgttggtccttccaattgttggaatggctgggctgggaaaaaccacctttgttcagctcatttacaatgagcctgagatcaagaaccatttcgaactctggaggtggtgttgtgtgtcagatgattttgatgttggaaatattgcaaatagcatctgcaatagcacagagaaggatcatgaaaaggcattgcaggatctgcaggaggcaataagtgggaagaggtacctaattgtcttggatgatgtatggaaccgggaagctgataagtgggaaaaattgaagacctgccttaagctgggtggcaagggtagtgcaatactaacaactactcgtgattcacaagtagctagaattatgatcactggtgtagttgaagcctataatcttgagaaacttggcgaagaatatacgaaggaaataatacagactagagcattcagtttggctggcagtgatgagctatctgaaattgttcagaagtttgtggacagatgtcaaggttctcctttagctgcaaaagcctttggttctatgttgagtaccaagaccagcatcctagaatggaagaatataatagccaaaagtgacatttgcaacgagaagactggaattttacctatactaaagcttagctatgccgacctaccatcgcacatgaagcaatgttttgctttctgtgccatattccccaaaaattatgagattaatgtggagaatttgattcaactatggatggcacatgacttcattccactagaggagaaatatcattttgaaacgacatcaggggaagaaattttcaaggaactagcttggaggtcattctttcaagatgtcaaacaaactcctcttgtgtgcagtaataatggagacagggtgcaactccgatacaccaccacatgcaagatacatgatcttatgcatgacattgctctatatgttatggggaaagaatgcgtaactattacggataggtcctatcgcaaagagttgttgtcaaatcgttcgacttaccacttgctcgtgtcaaggcatagaactggagatcatttcgatgattttctgaggaaacaatctacaactctccggacattattgtatccaacatggaatacttatggatcgatacatcatttatcgaagtgcatttctctacgtggactgcagctatatgaaatcaaagaacttccaattagaccgataaagttaaagcacctaaggtatcttaatctctcagaaaactgcgacatcaaagaacttccagaggacatatccatactgtaccatctacagacattgaatgtttctcattgcattagacttcgccggctcccaaaggatatgaagtacatgacaagcctacggcacctctatactaatggatgcaaaaacctggagtacatgcctccagaccttggacatctaacttctttacagacactaacatattttgtggttggtgctatctctggttgcagtactgtcagagaattgcagaatttaaacctttgtggtgaattagagttgtgtggtctagaaaatgtatcagaggcacaagcaagcacagtcaatattgaaaataaagtgaaactcacacacttgtctcttgaatggagtaatgaccaccttgttgatgaaccagatcgccaaaagaaggtactagatgctctaaaacctcatgatgggctcctgatgttaagaatagcattttacaaaggcaatggttttccaacttggatgacagatctcagtgtgctgcagaacttggccgagctctatctagttggttgttcaatgtgcgaggaatttcctcaattctgtcatttgaatgtcctaaaagttctttgtctcacaagtttagacaaccttgcaagcctatgcagctacacaacatccaatttttttccagcactaagagaacttcagttacatcgtttggagaggttggagagatggtcggcgacggaaggagaagaagtgacatttcccctgcttgagagtgctagtataatgaactgtccaatgttgaaatcccttccaaaagcaccaaagcttcggatattgaagctagttgaagaaaaggcagagctatccttattaattctgaggtctagattttcttcattatcaaagctaacactgtctgtcagtgacggaaatgcaggactggagcttgatcagaattatgaagcacctctttcggaaatggagttatgtggctgcgccttcttcttccccttaggcccatcccgtccaacagttgggatatggaaatggtttggacaacttgtggatttgaaaattgaatcttgtgatgtgcttgtgtactggccagaggaagagttcatatgcttggtttccttgaagaatttggccattgaaaaatgtaataacctaataggccacagacatgtgagtggggagtcaactcgagttccaagcgatcagttgttaccgtatctaacgtcactatcaataaggcaatgtaaaagcttggaagagatctttagacttccaccatctctcacatctatttctattcatgattgcagaaatcttcagctaatgtggagagaggataagacagagtcagagagtgtaatacaggtggaacgcaggtcggaacactgcaatgaccttgcttccacaattgttccagatcagcaatctccatcactaagaaataattctctgccatgtttagagagtctaaccataggtaggtgtcatagattggtaacacttaaccatctaccaccgacagtcaagtcgctgggaattggtcagtgtgacaaccttcattctgttcaactagacgcgctgaatcattccctcaagaagctactaatatttggctgtgagaagctttgttccgtctcaggacagctggatgcactcaagcgcttaattattgatcactgtaataaactggagtcattggattgtttgggagatcttccgtcactacgaatcctccgtcttgagggatgcagacgcttgcaatcagtagcagggtgccatggtcgttacccacttcttcaagatattacgattaaatactgcccagctataaatgtgaagcctctgtatgaacgcctcgggcagcggattgatagtcttgagatcagagagttatcagatgttcattcaagaaatcctgaagaaggggaacgacggcagaaggactgccggaatatattagacgaaataaaagttatttacagacaagaaaacaacaaaaacacaaaaacgaaaaaaagcatcaaggagaatgagtttcacatcgtcagcagtatgaccttccctaccctcgcaacatcactggatacattggtgaacatgagttgcactggaggagggcgttcaaccgcttggctggtgagccccacagagactatagacgaggccttgcaattggtccccttccccctgcagctccgcgttgaatcaaatgtggtggccaccgcagactcggtatcagaacgtacagtcccctaa</cdnaseq>

Protein Sequence

<aaseq>MVLDEMVVSATMAEVVIGPLVSMVKEKVSSYLLDQYKVMEGMEQ QREILERKLPAILDVIEDAEEKGAFRPGVSAWLRALKKVAYEANDVFDEFKYEALRRD ARKKGQFNMLGMDVVSLFPSYNPIMFRNKMGKKLQKIVGSIEVLVSEMNSFGFIHRQQ APPSNQWRQTDSIMADSEKDIIRRSRDEEKKKIVKILHNHASSNRDLLVLPIVGMAGL GKTTFVQLIYNEPEIKNHFELWRWCCVSDDFDVGNIANSICNSTEKDHEKALQDLQEA ISGKRYLIVLDDVWNREADKWEKLKTCLKLGGKGSAILTTTRDSQVARIMITGVVEAY NLEKLGEEYTKEIIQTRAFSLAGSDELSEIVQKFVDRCQGSPLAAKAFGSMLSTKTSI LEWKNIIAKSDICNEKTGILPILKLSYADLPSHMKQCFAFCAIFPKNYEINVENLIQL WMAHDFIPLEEKYHFETTSGEEIFKELAWRSFFQDVKQTPLVCSNNGDRVQLRYTTTC KIHDLMHDIALYVMGKECVTITDRSYRKELLSNRSTYHLLVSRHRTGDHFDDFLRKQS TTLRTLLYPTWNTYGSIHHLSKCISLRGLQLYEIKELPIRPIKLKHLRYLNLSENCDI KELPEDISILYHLQTLNVSHCIRLRRLPKDMKYMTSLRHLYTNGCKNLEYMPPDLGHL TSLQTLTYFVVGAISGCSTVRELQNLNLCGELELCGLENVSEAQASTVNIENKVKLTH LSLEWSNDHLVDEPDRQKKVLDALKPHDGLLMLRIAFYKGNGFPTWMTDLSVLQNLAE LYLVGCSMCEEFPQFCHLNVLKVLCLTSLDNLASLCSYTTSNFFPALRELQLHRLERL ERWSATEGEEVTFPLLESASIMNCPMLKSLPKAPKLRILKLVEEKAELSLLILRSRFS SLSKLTLSVSDGNAGLELDQNYEAPLSEMELCGCAFFFPLGPSRPTVGIWKWFGQLVD LKIESCDVLVYWPEEEFICLVSLKNLAIEKCNNLIGHRHVSGESTRVPSDQLLPYLTS LSIRQCKSLEEIFRLPPSLTSISIHDCRNLQLMWREDKTESESVIQVERRSEHCNDLA STIVPDQQSPSLRNNSLPCLESLTIGRCHRLVTLNHLPPTVKSLGIGQCDNLHSVQLD ALNHSLKKLLIFGCEKLCSVSGQLDALKRLIIDHCNKLESLDCLGDLPSLRILRLEGC RRLQSVAGCHGRYPLLQDITIKYCPAINVKPLYERLGQRIDSLEIRELSDVHSRNPEE GERRQKDCRNILDEIKVIYRQENNKNTKTKKSIKENEFHIVSSMTFPTLATSLDTLVN MSCTGGGRSTAWLVSPTETIDEALQLVPFPLQLRVESNVVATADSVSERTVP</aaseq>

Gene Sequence

<dnaseqindica>8260..8297#7087..7207#6222..6290#6012..6115#1267..5034#1..19#atggtgctcgacgaaatgggtacaaggacgacacattggatccgatcaggaataacagaaacaacgtgacgggaaggcatcgccggagggttattgacgccgacaagatgtgtcgccagagtgttccacggtgccagccgactgcatcgccgtgctagcttctcactgaggtcagatgctgtgtgtctgtactgacattcgttagtcctatttttcatacattggctgcattcttttttatttcttgtcctaaaataaaattggcctaaaataaaattgggtgggttccccctcttggctgaaataacaaatctgcatacaaatacaaatgcccggggccttcatttacctataaacaaaaatttgtttcgaagagagcaataatcgctctcttcaaaaataatcgctcgctttttttttctgcaaaactagcaaagtcttcaaatacctttgttctatgggccttgacatgcatctcgacaggtcaatttgacaactaggtagtttcttaagagcaaatggatgagcatagatgctctcacatgattagtaggtggaattttattccctcttgttttcaattgaccaataattcatgttttacaagacaccacctctaacatatatttactatgcatcatatcaagctaattgttgaatatgacttgatatacaagtatacaactcttacctcctgtttctatatatatgcaattatattctatatacaatataaatactaaaagtagaattgggcttaatatataactcttatattgtgtttccatagatataattgtaaatttatacaactgttcctatcattctacaccgttataatttggttatatcatgatgtaatgttttatattttatttttttctccaagtaatgttgtaatttctaggccttcacatcgaacatggtgttttcttttagagctatctttataatataaaagatatgtcttcaaaatttccttttttttcaggtgtaagtagtaactaatgactttagttctactggatgtttcttaagttcaaatggatgacagcaggtgctctcacatggttatttagatgctaataaggtatctagagtactgtagtgttatagttacctgtgaaccatattttaagtggctgatcattggggacacatcacaacaagcacactcccatctatttcctctgaagcgctcgtccatatttttctagtgcaccccaaagtcttcactgctgcagtgtttccttgtgttcttgtcagttgtgagcgcaacaatggctgaggttgttatcggaccactagtttccatggtgaaggagaaggtttccagctaccttctagaccagtacaaggttatggaaggcatggagcagcagcgcgagatcctggagcgcaagctgcctgccatcctggatgtcattgaagatgcggaggagaagggagcttttcgacctggagtaagcgcttggctcagagcactcaagaaggtggcctatgaggcaaatgatgtctttgatgaattcaagtacgaagccctccggcgcgacgcaaggaagaaggggcagttcaacatgctcggcatggacgttgtaagcctctttccttcttataaccctatcatgtttcgtaataagatgggtaagaagctacaaaagattgtggggagcattgaggtccttgtctcagagatgaactcctttgggttcatacaccggcagcaagctccaccatccaatcaatggcgtcaaacagattctataatggctgactctgagaaggatattataagaagatccagagatgaggagaaaaagaagattgtgaagatattgcataatcatgctagcagcaatagggatctgttggtccttccaattgttggaatggctgggctgggaaaaaccacctttgttcagctcatttacaatgagcctgagatcaagaaccatttcgaactctggaggtggtgttgtgtgtcagatgattttgatgttggaaatattgcaaatagcatctgcaatagcacagagaaggatcatgaaaaggcattgcaggatctgcaggaggcaataagtgggaagaggtacctaattgtcttggatgatgtatggaaccgggaagctgataagtgggaaaaattgaagacctgccttaagctgggtggcaagggtagtgcaatactaacaactactcgtgattcacaagtagctagaattatgatcactggtgtagttgaagcctataatcttgagaaacttggcgaagaatatacgaaggaaataatacagactagagcattcagtttggctggcagtgatgagctatctgaaattgttcagaagtttgtggacagatgtcaaggttctcctttagctgcaaaagcctttggttctatgttgagtaccaagaccagcatcctagaatggaagaatataatagccaaaagtgacatttgcaacgagaagactggaattttacctatactaaagcttagctatgccgacctaccatcgcacatgaagcaatgttttgctttctgtgccatattccccaaaaattatgagattaatgtggagaatttgattcaactatggatggcacatgacttcattccactagaggagaaatatcattttgaaacgacatcaggggaagaaattttcaaggaactagcttggaggtcattctttcaagatgtcaaacaaactcctcttgtgtgcagtaataatggagacagggtgcaactccgatacaccaccacatgcaagatacatgatcttatgcatgacattgctctatatgttatggggaaagaatgcgtaactattacggataggtcctatcgcaaagagttgttgtcaaatcgttcgacttaccacttgctcgtgtcaaggcatagaactggagatcatttcgatgattttctgaggaaacaatctacaactctccggacattattgtatccaacatggaatacttatggatcgatacatcatttatcgaagtgcatttctctacgtggactgcagctatatgaaatcaaagaacttccaattagaccgataaagttaaagcacctaaggtatcttaatctctcagaaaactgcgacatcaaagaacttccagaggacatatccatactgtaccatctacagacattgaatgtttctcattgcattagacttcgccggctcccaaaggatatgaagtacatgacaagcctacggcacctctatactaatggatgcaaaaacctggagtacatgcctccagaccttggacatctaacttctttacagacactaacatattttgtggttggtgctatctctggttgcagtactgtcagagaattgcagaatttaaacctttgtggtgaattagagttgtgtggtctagaaaatgtatcagaggcacaagcaagcacagtcaatattgaaaataaagtgaaactcacacacttgtctcttgaatggagtaatgaccaccttgttgatgaaccagatcgccaaaagaaggtactagatgctctaaaacctcatgatgggctcctgatgttaagaatagcattttacaaaggcaatggttttccaacttggatgacagatctcagtgtgctgcagaacttggccgagctctatctagttggttgttcaatgtgcgaggaatttcctcaattctgtcatttgaatgtcctaaaagttctttgtctcacaagtttagacaaccttgcaagcctatgcagctacacaacatccaatttttttccagcactaagagaacttcagttacatcgtttggagaggttggagagatggtcggcgacggaaggagaagaagtgacatttcccctgcttgagagtgctagtataatgaactgtccaatgttgaaatcccttccaaaagcaccaaagcttcggatattgaagctagttgaagaaaaggcagagctatccttattaattctgaggtctagattttcttcattatcaaagctaacactgtctgtcagtgacggaaatgcaggactggagcttgatcagaattatgaagcacctctttcggaaatggagttatgtggctgcgccttcttcttccccttaggcccatcccgtccaacagttgggatatggaaatggtttggacaacttgtggatttgaaaattgaatcttgtgatgtgcttgtgtactggccagaggaagagttcatatgcttggtttccttgaagaatttggccattgaaaaatgtaataacctaataggccacagacatgtgagtggggagtcaactcgagttccaagcgatcagttgttaccgtatctaacgtcactatcaataaggcaatgtaaaagcttggaagagatctttagacttccaccatctctcacatctatttctattcatgattgcagaaatcttcagctaatgtggagagaggataagacagagtcagagagtgtaatacaggtggaacgcaggtcggaacactgcaatgaccttgcttccacaattgttccagatcagcaatctccatcactaagaaataattctctgccatgtttagagagtctaaccataggtaggtgtcatagattggtaacacttaaccatctaccaccgacagtcaagtcgctgggaattggtcagtgtgacaaccttcattctgttcaactagacgcgctgaatcattccctcaagaagctactaatatttggctgtgagaagctttgttccgtctcaggacagctggatgcactcaagcgcttaattattgatcactgtaataaactggagtcattggattgtttgggagatcttccgtcactacgaatcctccgtcttgagggatgcagacgcttgcaatcagtagcagggtgccatggtcgttacccacttcttcaagatattacgattaaatactgcccagctataaatgtgaagcctctgtatgaacgcctcgggcagcggattgatagtcttgagatcagagagttatcagatgttcattcaagaaatcctgaagaaggtccctttcgatcaaccttcccttgatagtagtactaccttgctgtactttttgcctgttgagaaactcaaattttaatcactactacacctactctgttattgttttaaagctttccagtcttagttctacatatatggcatgcatgcatgtggttttgatactagtttcttccttttgcccatatatatgaaaatgcacgacttattataatcttcactttcggattgtagtcacctgttctcataaccttgaaagttgaaacttccatttgcaggttaccctctagtctattaattcttttagtaagtgctcacctgatttacatgtttgaagtttgtttatatagaggaattctctctctcttatttatcacagattaacatcgaggaattctgactctctgttatacatttagggccattattgagggatccatggtcttggaaatatgctattcctggatgtggtggatattggtacaaccaggatgattgatgtcctgacctgattataggagatttacctggaaggtttgtgagattgactcgtgcattctcaatttataggttttagtagctgaaacgtcaaatttggttgctgctgctttctacaggtgaagtacgattggtgcgtctggctggacgacttccagatacacgattggtgcataagtgactgagaatataatatattagttatctttctaaacatgatctccacttatcttgggtaatgtaaattggatcaagcagcttgaagatctcacgctctacaaaaatctgaccttaatgtacacagtaggtgatgctctacttgtggtttttcttgctcatatgaagtgtcttctgaagaaataaaccatgtctacactctgcagtctgtagtattagtattcatgtagttatctggtacaattttctgtttccctttttttctggctgtcttgtatgaccctgattcttttttttttttaggggaacgacggcagaaggactgccggaatatattagacgaaataaaagttatttacagacaagaaaacaacaaaaacacaaaaacgaaaaaaagcatcaaggaggttggaaagccaagagtctttgatcaatatcttgaagaattagggtggccaccctatcaaccgttgtgggatttttttggaagatacgcttattccgtcccaacagaatgagtttcacatcgtcagcagtatgaccttccctaccctcgcaacatcactggatacattggtgaacgtgaggctgtaatattgtttctgaatattgtttggtcaaaagaagccttgggtaattgcatttccattggatcattacctaaattggttaagtctcggtttgatttaaattattgagcttcatgggttgctacaatttagaccgagggagtacaattattgaacttatgtgttttatatttcaatttagtacagaatccgtctgacagctgccattttatcttcaataacacctctattgtcctcacatttatcctctatcccaaaaaataaaaatatttggagcaccagaaagtcacctgaagtgctctgctttgctcagcgtaattcatcttgcacctgcgatgctctgatttcctctgctccgctgaccagtggccagccatgaagctaaagctaattaacatgatgttccacaaatacattcacattaattggctgcatactgggcgagttgcattggtcgtgtctcctattactcggctcattttcatttatgtaaattagcttgagtgatcgtatgagaaatcatttgatgcaaaagttgtatagagattatgagaaggaaaaaaaaactgcattttcggtgttcgaccgaatggttgcgaggacaacgtgtagaatcataaagggcatttcccaccccaaaaactagccaataaggttatgggctcttccatttatatattaagtcatttgctctttcacaaccaatgtaggactatttaacacaactataccgtcttactctcgactgtcatcatctttctgtgtgacattcacaattgtacaaatagatgagttgcactggaggagggcgttcaaccgcttggctggtgagccccacagagactatagacgaggccttgcaattggtccccttccccctgcagctccgcgttgaatcaaatgtggtgggtaaggcccttttgtttcggcttataaaccaacttgtaagtcaaaaagtctaagcctaaacaaataagcggccttttcgtttggcttttctaaagctataagccactctaacactattaagccaaaagctaagttggagaagctattttggcttatgtgaggtagatgtatgactccactattaaacttaggacattaaatccaccggcttataaatcatataagccaataagttaacttaaaagtctaagccaataaatctaagcctaatcgaagagggcctaagtctcgttgtcacattagacttctaaagatttacaatagcaatcaaagaatttctaaatttgaccgataataggtaatctttaagatcatttggcccttagctgagtggtaaatgttcatttgccttacatatgcctttgaaacgcgatcaactgctactgaactgtcaggcagatgatcaattttcacggtataaaatcgtacattgtcatatcttttcaaggatgaaaaaaaaagctgaccatgttaatactctagaatccataaaaaattcaaataaaattataacaatccaagcagcccgaagttgctacattatttagaaagtacaacatgcaggatcatgttttgataagacaaaatgtcgacaacaacaataatgtgaagcacacatataatttatgcttcccactttgcacggacttaacgtggactccagtttcaaacttgacgacatgcaattgaagcaaacctgaaagaaatggagtgcacaaatttcttacagatcgagtgaaacaaaataagatagtaaaagtaacaaccacaactagcttgctacttagagagaattctatttacctctttcatgggttgccagaaagatcatggctggcaacaatatcaggtgtcagtagcatcgtcatcctctgaaccccagttataatcactctcttcgctattatcctcttggacctcttctgcatctgctccgaagatggcaagtctaggatggttgggatttgcacttgcttctctcttgattgcagccaccgcagactcggtatcagaacgtacagtcccctaa</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0131100, RefSeq:Os10g0131100