Os04g0608100

From RiceWiki
Revision as of 19:59, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os04g0608100

Description

Galactokinase family protein

Version

NM_001060346.1 GI:115460421 GeneID:4336928

Length

6031 bp

Definition

Oryza sativa Japonica Group Os04g0608100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:31163068..31169098

Sequence Coding Region

31163414..31163658,31163740..31163829,31164286..31164355,31164446..31164474,31164555..31164595
,31164740..31164915,31165211..31165310,31165535..31165614,31165960..31166025
,31166102..31166210,31166475..31166518,31166784..31166855,31167811..31167924
,31168955..31169011

Expression

GEO Profiles:Os04g0608100

Genome Context

<gbrowseImage1> name=NC_008397:31163068..31169098 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:31163068..31169098 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggtggcgcccggcggcggaggaggaggggcggcgtcgtggccgtcggagggggagcttgatgttgttcgagcaaaggtagtggagattagtggaaggggtgcaggagaggtcagggtggttgcttgcccctacaggatttgccctctgggggctcacatcgatcatcagggtggaactgtcacagctatgaccattaattatggtgtacttctcggttttgtggcctctgatgatgccgagatttcactccaatctggtcaattcgaaggtgtgatacgattcagagttgatgacttgcaaaagcccattgaaaacccagaaaacataaactgggagagctatgcaagaggtgctgtttatgccctgcaaaattttggatatgatctcaagaagggtattataggatatatttctggtgtgaaaggacttgacagttcagggctcagttcatctgcagcagtcgggattgcctatttgatggctttagaaaatgtgaatgatctggttgtatcaccagtggacaacattcagttggacaagtccatcgaaaataaatatttgggtcttgaaaatggtattctggatccatcagctattttgctctcacggtatggctatctcaccttcatggactgcaagaccgccacacattcctacgtctacttctcagtgttgagtaaaagtcagcaatgtcaaggagaactaccattcaagattttgttagccttttcagggctgcaacataacctaccgaagaagagtggatataatacgcgagtttttgagtgcaaagaggctgcccgtgctcttttatgtgcttcaggctgtgaagatgcatcaagtattcttcgtaatgttaacccagccatatacgaggctcagaagtgtatattagaagaaaatctcgctaggagagctgagcactacttctctgagatgaagcgagttgtcaagggaagagatgcgtgggctcgtggagatcttcgtgagtttggccagctgatctctgcatctggtcgcagctccatactgaactatgaatgcgggagcaaggagatgatccagctgtacgagatcctcctcaaggcacccggcgtcctcggcgcgcggttcagcggcgccggcttcagaggctgctgcctcgccgtcgtggagagcggccacgcggaggcggcggcggcgttcgtccgggccgagtacgagaaggcgcagccggagctggtgagcaagatcccgccgggccgccgcgtgctggtctgcgagcccggtgacggcgcccgcgtcatatag</cdnaseq>

Protein Sequence

<aaseq>MVAPGGGGGGAASWPSEGELDVVRAKVVEISGRGAGEVRVVACP YRICPLGAHIDHQGGTVTAMTINYGVLLGFVASDDAEISLQSGQFEGVIRFRVDDLQK PIENPENINWESYARGAVYALQNFGYDLKKGIIGYISGVKGLDSSGLSSSAAVGIAYL MALENVNDLVVSPVDNIQLDKSIENKYLGLENGILDPSAILLSRYGYLTFMDCKTATH SYVYFSVLSKSQQCQGELPFKILLAFSGLQHNLPKKSGYNTRVFECKEAARALLCASG CEDASSILRNVNPAIYEAQKCILEENLARRAEHYFSEMKRVVKGRDAWARGDLREFGQ LISASGRSSILNYECGSKEMIQLYEILLKAPGVLGARFSGAGFRGCCLAVVESGHAEA AAAFVRAEYEKAQPELVSKIPPGRRVLVCEPGDGARVI</aaseq>

Gene Sequence

<dnaseqindica>5441..5685#5270..5359#4744..4813#4625..4653#4504..4544#4184..4359#3789..3888#3485..3564#3074..3139#2889..2997#2581..2624#2244..2315#1175..1288#88..144#agaaggcaggcaaaaggcacactcattcgcgggccgcacgtgcagcggcggcgcggcgcgggtggatcgccgacggcgagaggagcaatggtggcgcccggcggcggaggaggaggggcggcgtcgtggccgtcggagggggaggtaaggtgccccgccccagtggcattggtcgctctcgtagagcggtgcgggtggttccgatcccgcgcggccccgtagatttttcgcgtttctgcttcagtgctttgtttgatttggggggcgaatgcttgcggggctggggatcgcgacttctccggcgaaatattgctgcgccggcggcagcaccggcggggcggtgaccccccgtggccatcgatcgatggcggcgtcacagtgtagtagaattacctgctttcccactgcttggttggtggtcaatctacatctaattaccatgtttgcaaaaacattcaaatatgcacctcttttattattattgttgttgttgttgttgttgttgttatttggaaaggaatcgattttagtttttcagtttggtagagtggtggtgcataataaaagagaggaaagtatggattggcagtacacgtgagatggtaatgttagctcgaattgatgtggcaaccatggtccatggatgctagcacttattgagaattgatgtgaattttgggataagataatgtggtacctttgcttgtgctttctgatgatgtgtcgaagagggaaggggtggatgtgcactatgcttttggactatgtagtgatgtggatggcttcaggatacgatacaatgtgctgtagttttcaaacagctgtatttttttttgacaagtcatctgctcccaactaaatctgaatcttttctggtgttccagcagcatgagaccatgtttagcccaatgagtcttgaagatagttctagccaaggagcaatgagtttttctcctatcagctcgagttttgatataaccaatctgacatgcggaatttaaattgctctagtgaaagttgcatggccttgaatatccttttattttcttttaactacattgttgaacttacacgttactatacatctatgataggagtagcttagagtactcaactaggttcatcctgttatgtatggtcatcttatccttctcaattgtttctgatgatgcagcttgatgttgttcgagcaaaggtagtggagattagtggaaggggtgcaggagaggtcagggtggttgcttgcccctacaggatttgccctctgggggctcacatcgatcatcaggtaactttgtagatattatgtccttgatgttttcatttttcagaagagtgacccactgttaagactgttgtataaactgtatgtttgcaaattattttaatgtgttcttatattaaatttgtatatgtgtatagtcaggcagcaatgtagcataaatggcatgtgctttaatgtcatatcgtcgccgcataaatgtgacataattggactgttctatacatgtgtggaatgagttgatgagaccttgatgattttcagggggagtgttaagtacttgacaataaacctagctataagaattttcctctgcaaatgttggaaatatattagcactagcatagtggtggtgatttttcctacaaatagaataaagctcccacttgggtttgtatttggagagtctttggattaagtctgtaaacctgagtttatttgagttacaaagcagatccatcaatattggtggaattcaatttctctttatttctgagcagcacacgtagtaattctttaaaagggtggaagttgcataaactgctaatttacttagtttcgtgggaataaattttcaggtcataacatattaaatcagtcagcagtaagagaaaagttctgtatattggatcatcaccatctctaactgactagaatcaacacaaacatccttgcagtaactattttttttaccagttcttaacctgttgttggcggtatctaccttaggttatactctacctaaggtaatgaattagttttatcatttcaaaaattgctggataccctctaatgttaaataattcacttcaaggagagctatattagttgggtatttatggaaatgtgttcccatgaacaccttattgttacaaatatcatgggttgacttcaattcaaaagaacctctgcaagggatatggtggttggctaacttctattctgttctgcattacggcagggtggaactgtcacagctatgaccattaattatggtgtacttctcggttttgtggcctctgatgatgccgaggtgagttattgtgcttaaacacttttatctgtatgctcccctgaaattccaagttaagttctttgtgccaaaataacataccatcctcccttaattgccccttttcccctttctttctcctaccttttctgaatatacatcaatcagaacatattgtctccattcaaatgataatttctacacgctgactcactcacattatccatcctgtcataaaaaaatatgcttatatataacactggtaatcctctggtttgttttacagatttcactccaatctggtcaattcgaaggtgtgatacgattcaggtatgtttgcggttgcaccatgttttggtgttcttggttaacatcaaatagcatagccagctgattcatccatgcgcaactttgacaaaatgcactttttttttcaaatctctgttagccttttttttttttccaatagacgtgctgcctcacctatttctcattgttctgttcaccctttttgttatagctgtgtttccatcactaaatcctcgctttgttaaattagacgacactcgtttacgtgtttcaccacttcaacagagttgatgacttgcaaaagcccattgaaaacccagaaaacataaactgggagagctatgcaagaggtgctgtttatgccctgcaaaattttggatatgatctcaagaaggtgacttttacatttaataattcaaagtccagaatatcttatgctttaaataatattgacagatgacttcttgtagggtattataggatatatttctggtgtgaaaggacttgacagttcagggctcagttcatctgcagcagtaagctaactgatatgtcatgtatatttgagttaaaattgctggcacaatcatctgtaatatgtagaaaactggaaatatgagtttagtgccaacctagttgtgaatcgaatatgcagtatttcataatcatgacatatacttggctcacatttgacttggagttcaaagcaaatttgtgaagctactaactttgtactagtatcttctaaaccttcagctcaccataacaaggacagaaacttccagttcttactctaggttctcaaaagaattattaatataattgatactttggttagttatgtgatcatcaaatgcctatttctgtatgctcctcatcaggtcgggattgcctatttgatggctttagaaaatgtgaatgatctggttgtatcaccagtggacaacattcagttggacaagtgagtttgtttccttttagtaagcattccatgtggactaacattatgaattcatacatgggatccagaacagttctaatttcaagtatctatgttgaagtccccacaactatctactattgccatgttctaaagcaacaatcaaatattgctacataagatttattagctcattgagtcatggtcactagcagagttcttaatttcatatccctatttgtcaggtccatcgaaaataaatatttgggtcttgaaaatggtattctggatccatcagctattttgctctcacggtatggctatctcaccttcatggactgcaaggtagtactttcccttgtattttctgaaagtctactattttagtaatatattcagtatgacttctgttttttcaaagttttgagactggtatatcattttttctgtaaaaaaggcttttttttattcacacaagttcattttttatgatattgcattgggtccatataattatttcaatccttctcgacaattctttctttgttttgtggtttcattgcgcatagttttagaaaatgtgcacttcaatgctctctgttagcatttatagtgactgagactctctttgcttgagtagaccgccacacattcctacgtctacttctcagtgttgagtaaaagtcagcaatgtcaaggagaactaccattcaagattttgttagccttttcagggctgcaacataacctaccgaagaagagtggatataatacgcgagtttttgagtgcaaagaggctgcccgtgctcttttatggtgagctttgtttgagtataacaaattctgtcaggcaaatatgcatcttgttcagtttgcagattcgtctatgatggatgttggcagattttttgttcagaacatacccaatttcaattatcattttgttgtttgaattcccagtgcttcaggctgtgaagatgcatcaagtattcttcgtaatggtaaactatttatatgtactttttgttatgaccaactctaaaatttaaggttgataccattttgttttcttctaacacagttaacccagccatatacgaggctcagaaggttgtcatttgaattctctctcttaaaatattttcttacttgtaccatattttgaatctgaatacattccatcacactcttttcttgcagtgtatattagaagaaaatctcgctaggagagctgagcactacttctctgagatgaagcgagttgtcaagggtgagcacaaccaaatatttttccgtgcgctcttttagtatttggtccactcatttaaatttctactcgatgcatatgtactttcatgaacacaaatagcaaattacgtaataattagcgattgtactacttgctgtagaccttacatcatgaagaactatatttgcacacttctgctacctctattgtctccatagatgaactgcctttactactaaaatttggcattcgttgtgacttaacttaaagccatatatgcaaaagaaagaggcaagattatgatattctttcttgtgttccaatacgcacgaggaatcaacatattgagttgtcatcttaggaatcaaaatgcttagtagagtacatatattcttcgaacctgcatctttaccaaatttgaactgaaagtgcaatgacatattatagtataacaatatccggatactctgtgttcaggaagagatgcgtgggctcgtggagatcttcgtgagtttggccagctgatctctgcatctggtcgcagctccatactgaactatgaatgcggtatgtcgatcgcacgttagacatctgagataataaccatcactaaaaactcaatggctgcttgctctcacaaattggcagggagcaaggagatgatccagctgtacgagatcctcctcaaggcacccggcgtcctcggcgcgcggttcagcggcgccggcttcagaggctgctgcctcgccgtcgtggagagcggccacgcggaggcggcggcggcgttcgtccgggccgagtacgagaaggcgcagccggagctggtgagcaagatcccgccgggccgccgcgtgctggtctgcgagcccggtgacggcgcccgcgtcatatagctcaccgcccaccgccgttctgccggtctcgccggagcagcctcgcattgccgtgcccggcgcgccgcgaaggcggtggcgtcgtggcgacgccggcgtgcaaggatggacggtggtcgcttgggcctcggcgcggcgagctcccccggtttacgcgtacggagcttggctagttccagttgagacttgagagtgggtgtaatggtaatggtataggtacgaactgtccgtgtgtatacgggtacagactacagagtgccagcttttgtccgtgtatgtgtagaaccaattgatgatcaatttttgataaatatctcagcaataagcagcgacgtagatatgtact</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0608100, RefSeq:Os04g0608100