Os04g0626000
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Contents
Annotated Information
Function
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Expression
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Evolution
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Structured Information
| Gene Name |
Os04g0626000 |
|---|---|
| Description |
HMG-I and HMG-Y, DNA-binding domain containing protein |
| Version |
NM_001060478.1 GI:115460685 GeneID:4337066 |
| Length |
5210 bp |
| Definition |
Oryza sativa Japonica Group Os04g0626000, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 4:32229784..32234993 |
| Sequence Coding Region |
32230175..32230209,32230306..32230353,32230798..32230881,32230955..32231014,32231208..32231261 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008397:32229784..32234993 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008397:32229784..32234993 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atgacatctgtagagaataaagctgttgcacataatgaaccactacccatggagcagacattaagctctggtgctaagcgtaagcgtggtcgtccacggaagtatgagtacggcatgcatgaattaccatatagtgtgcagcacattcagagcgtcccacctcttcacagcacacaagatagctcaaacatccgacaggatgggatacagatcaaccatacatcaggtggtagctttggccctaatataggcacaattcaggctttgcctacaaagcaaggcccagctaatagatccagtggacctagagattctgtcaatctggttaagacttctctcagccaagcctccatttatactagtgctcctttgcaaggtaattcagtcaaagatgatattgttggcaagtattttgttggtaagatgtcgaagaaatttcctgggttttctctgattacggtgaaagtgaaggacaatcaggttctcaaaggttggattccagatgaaaataacctccgcccaataacaccaaaagatgatcttgccccagatctccctatgcttcgaccaagtcaagttcgaaagaggccatctactgtttacagacaagcttctggtcctattccagtccccttggaggatgttacatttgcaaagcctctacagatgaggaggcctgtagagaaatccttcactaagcacacggtcccttccgttccaagacctcacatgggttctggggttgttgcagcagtacctatctcagtttcacccagtaatgctgaatcaaggattttctccgagcagggtactgaacatgtgaatccacaaccgttatctgctgtggtacctattaaatcaggtcaacctgtattggcatcatgcaaggaagtcgctggagggaaaactgtcaatgagattcaaacagtctctgaatcttcaaagcacactgaagagtcatcaggggaaaggcatctgcttaatgttccagtaatggatgctataaaggaatctttgggtcccaaagagcagcctaatgctacaaatagcaagcaacaaacttttatggaaccaccggaaagcacagaacaagctgtgcagctggacacagagagagacatttccaaaggagctgatgactcaaagtcagaagcctcaggaggaactgcacctccggtagaggcttcaaccgcagtacataatccccaagatgacagtcatgaaatgaaggttgacaacaaatga</cdnaseq> |
| Protein Sequence |
<aaseq>MTSVENKAVAHNEPLPMEQTLSSGAKRKRGRPRKYEYGMHELPY SVQHIQSVPPLHSTQDSSNIRQDGIQINHTSGGSFGPNIGTIQALPTKQGPANRSSGP RDSVNLVKTSLSQASIYTSAPLQGNSVKDDIVGKYFVGKMSKKFPGFSLITVKVKDNQ VLKGWIPDENNLRPITPKDDLAPDLPMLRPSQVRKRPSTVYRQASGPIPVPLEDVTFA KPLQMRRPVEKSFTKHTVPSVPRPHMGSGVVAAVPISVSPSNAESRIFSEQGTEHVNP QPLSAVVPIKSGQPVLASCKEVAGGKTVNEIQTVSESSKHTEESSGERHLLNVPVMDA IKESLGPKEQPNATNSKQQTFMEPPESTEQAVQLDTERDISKGADDSKSEASGGTAPP VEASTAVHNPQDDSHEMKVDNK</aaseq> |
| Gene Sequence |
<dnaseqindica>4785..4819#4641..4688#4113..4196#3980..4039#3733..3786#2665..3628#tccctctcgcgttttcctccccatctctcctcctcctcctcctccgtgtctccgccggtggtgccccggcgagctctcctccgccgcctcggcgcgccacctctcctctcctcgcgccgcgggggagaagccgaacgggcgccggagacacggcgcggattgcctcaccccccttagtggccgtatcaactatcacccttggtgcgcggcctcctcgcgcgcgcgggaacggcgatcgtatcggggtcggatcggattggaggtatccatttttttctctcttgggcatctgcgtcatttcatgagacggcgttgattggatttgtgacccattcgggattagatggatttttttttttttgccctctgattagctcatccagtttttttcccggaatttaggagctcagttaatcgatgttatgtgttgatgtaatatggtaatcaatggtacaggaggaggggaaatcatttcatttggttattgctttcaacaaagctgtgcctcggcctttaattttacttaaaaaatgcattgctgcattttttttaggttttagtgtggtaggttgggtaggaattggataagattgctagtggtaatgaacttcacctccaactcatctttatacgattctttttgttgcttgagcccaggcttgcaattttggtgcaacatttagggattattacaagttccaacgaacaagtttggtgatattagttggtccctctagttcatctgtttgacacatattttacaaagcttgagtgtttgtgctcagggcatgtgttacagatctacaagagctcaacgccgtaataagttggtttctgcatttgtaatccaagaatataacccagtttaatttattacatgttgatgctagtaatagttgctatagaacatttatagccaggaaggtatttatgttccttttgcctcgtatgcatctgacaaatttcattttcattgcttcatggatatttactgttatttattatataaacattagatatgactagggcttcgtggaaattcctcctccaatgctcgtttttggcaattactgtttccaatggatttggtcactaggaatggtaaccgacgcacacaggattaaaatgtaggggttgccagtgaaataaaaaacacattagtaacgactgaattgaaaggaatcatttttttggatccaaatttatacatgagccgcatgtaaacaaaccactcttgctgaagacaattttttatcgtaattctgctatgcacagcgaagtcctgagatctgataaatgtgcttaaatatctatttgtgtactaatatcatcatacttaatggtgattttgaagtgctacttcataattttataaatgtaaatttggaaactgaacacaaattgccttcatttatcacagccacagcccacagcagaggcaccaccacctgagcagctgaactcaactaagcggcatgcacaccagagtcggcttgcactcacacgctacaaccctgccacttgtacgaatggaagaatggttggaccgcagcaggggatgctcgggcccccctgttgtgtctgccccttgaaacggttacggaaacggtaagagccattcgaaacggtggcagaaatggttttgctgttcaatcgaccattttcttggtttatcatattgttccagaaattatcattttggggaaatcggtaattagcatatacagctccaactagaggctgactatagcaacgcgtagaggcccatgatccacgccaagtagaggaccacttcaggccacatcaccgtgtagagagccactacgtcaatcaggacttgaccaagctaccctgcccacttctttcacaaaaatggttccagctaggggattcaaacagctgacctataagttagaaaagacatgcaccaaccaccatattaaatatttaaacttcattatgcacctcgtatacaactattttattagttcataaatgtttttagtacaattgtcaatggctatatgtaaacatgccatcatattaaataaattgagttatattacgtgtatatgtgtgttggtcaagtgtgtgaaaacatatgttgttactatttgatgtttccgacatgaattgttggtttcctaatgattccaacacatttccgcccggattattccctttttgatttttcaatatcatttccatttccatttccggctctactgctttcaattatattttcgagaaaagtacggttacagaaatggttgaagctgttttccgaccattttctcccctagatatgaccctgtgggtactttatttattgcaaactgtgctatgtctcttttgaaaataattccatgagagcttcctttttagttacgttcttagcagacttaattaatttcattcttagcggatatggaaagtaggcttctatcttcctgattgtcgacttgctctatcatcttctaatcttcttgtgattacttgccatattttgccatcctttcgctattgaggttgctcattgcgctcactttgcatgttcaaggggagaaaaactcatcaagtaattgaaggtggtgaatacacttttacggggcattatcatcgttcctaggttcagctgcaaaaagttaaagcaaattgccaaagatgacatctgtagagaataaagctgttgcacataatgaaccactacccatggagcagacattaagctctggtgctaagcgtaagcgtggtcgtccacggaagtatgagtacggcatgcatgaattaccatatagtgtgcagcacattcagagcgtcccacctcttcacagcacacaagatagctcaaacatccgacaggatgggatacagatcaaccatacatcaggtggtagctttggccctaatataggcacaattcaggctttgcctacaaagcaaggcccagctaatagatccagtggacctagagattctgtcaatctggttaagacttctctcagccaagcctccatttatactagtgctcctttgcaaggtaattcagtcaaagatgatattgttggcaagtattttgttggtaagatgtcgaagaaatttcctgggttttctctgattacggtgaaagtgaaggacaatcaggttctcaaaggttggattccagatgaaaataacctccgcccaataacaccaaaagatgatcttgccccagatctccctatgcttcgaccaagtcaagttcgaaagaggccatctactgtttacagacaagcttctggtcctattccagtccccttggaggatgttacatttgcaaagcctctacagatgaggaggcctgtagagaaatccttcactaagcacacggtcccttccgttccaagacctcacatgggttctggggttgttgcagcagtacctatctcagtttcacccagtaatgctgaatcaaggattttctccgagcagggtactgaacatgtgaatccacaaccgttatctgctgtggtacctattaaatcaggtcaacctgtattggcatcatgcaaggaagtcgctggagggaaaactgtcaatgagattcaaacagtctctgaatcttcaaagcacactgaagagtcatcaggtatgttcgttggaggaatgcaatttgatctactttgaataatatattacctctggatagaaataaagcttaaataatagatcacattttttgtgtcattataggggaaaggcatctgcttaatgttccagtaatggatgctataaaggaatctttgggtaagatttagatgttgtatgctcgattcatgtgtgtcacacacaagtagattcagttattttattttggggcatgacaaattcagcacgctcgttgtcaagatagcatctgtacaacactatatatgccccttctgccctcgatgacttattttctatcaagaacaatcactaaatggatttgtatctttaggtcccaaagagcagcctaatgctacaaatagcaagcaacaaacttttatggaaccaccgggtaatacataattccattatttgacatgcttagtattaaccctctagttaatgctgttgatatgaatatttagaaagcacagaacaagctgtgcagctggacacagagagagacatttccaaaggagctgatgactcaaagtcagaagcctcaggaggtaaaaatgtgataccctctacttttaatgtttttattggcacctagagtaacgttaaaagctttgattctatgggcatatgttctgagcaaatatgtttgtttattggctcaaagataatcctttgcctgcacaagcttttttttccttgtgtgtaaccattgatttgctgttagtactttgttgtgtgccatacataagctagattgtgttgctaacataaatccttttcctcgtgtgtaaccattgatttgctgctagtactatgttgtgttccccatacataagctagattgtgttgctaacataaatccttctccttagtcgtgtgtaaccattgattttctgctagttctttgttgtgtgccttacataagcagtgatgctaacaataaccattttccttggattgtgttctaaacataaacccctcttttatttcaggaactgcacctccggtagaggcttcaaccgcagtacataatccccaaggtaaccttctacacctcttgggaacattttattattatctattatttactgcaagaactaacaaacttgctgttacattgaaaatcaaaattccagatgacagtcatgaaatgaaggttgacaacaaatgaaagcagcgcttgagaaagacaaaatgattcttaatgttaggtgaaagcttcaaatccagattgtttctgccaagtcttactataaatggctggatgccaaaggcgtagactcgtactctaggatatatacttgtctttcgcttttatttgtcttccttataaggatacttgagctatctttcattttcattcgtcttccatttaaggatacttgaaccttttaataatgatgtaaagccatacaaaaaagttacttcatacttggaacaaaaagaaatgagaaaaaacttggaaggactaggccccatataggaaaatggcatatctgaatcgaaagcatttgtaccatggcccttgtgataattaagtaacagaaggcaagctgttattg</dnaseqindica> 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