Os04g0678800

From RiceWiki
Revision as of 20:02, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os04g0678800

Description

N-acetylglucosaminylphosphatidylinositol deacetylase family protein

Version

NM_001060810.1 GI:115461349 GeneID:4337416

Length

3683 bp

Definition

Oryza sativa Japonica Group Os04g0678800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:35064801..35068483

Sequence Coding Region

35064982..35065169,35065531..35065601,35065761..35065825,35065925..35065969,35066060..35066140
,35066527..35066594,35067132..35067180,35067520..35067677,35068042..35068105

Expression

GEO Profiles:Os04g0678800

Genome Context

<gbrowseImage1> name=NC_008397:35064801..35068483 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:35064801..35068483 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgtggatctggatgctcatggcggcgggggccgtgctcctgtgggcggtttctctggggcgggtgctctcctcctcctcgccggcgtgtctgcctgccaactccaccttcctctcccctcctcgcggcgacaggatgagccggaatgtcctcctcgttctcgcccaccccgacgacgaatccatgttttttgctccgactattcttttcctcaagtcaaaaggtcacagcattcatatcttgtgcttgtctcaaggcaatgctgatggccttggaaatatccgcaaagaggaactctaccttgcctgtgtcactcttaagattccagctgagcaagttaaagtcttggaccactcagaactgcaggatggatttcataaaaattgggatcatggactaatagcagaacttaccctggcacaatcccagttatggaatatcgacacgattgttgccttcgattcccgaggagtatcaggccatccaaatcattgcgatgttcatcatggaatctgcaagcttctgcgtgacaacgggcaaggacacattgaagcatgggagcttgtaagcttgaacatttttcgcaagtacagtggtccagttgacatttggctatcttccaccctctcctcaagctcaaaacaaccaacttatactcttgttaataatagcccttccagaagctttgaggcaatggcttcacacaaaagccagtgggtttggttcaggagattgtttgtcctattctcaagctacacatacataaatgtgctccaaaaaatttga</cdnaseq>

Protein Sequence

<aaseq>MAWIWMLMAAGAVLLWAVSLGRVLSSSSPACLPANSTFLSPPRG DRMSRNVLLVLAHPDDESMFFAPTILFLKSKGHSIHILCLSQGNADGLGNIRKEELYL ACVTLKIPAEQVKVLDHSELQDGFHKNWDHGLIAELTLAQSQLWNIDTIVAFDSRGVS GHPNHCDVHHGICKLLRDNGQGHIEAWELVSLNIFRKYSGPVDIWLSSTLSSSSKQPT YTLVNNSPSRSFEAMASHKSQWVWFRRLFVLFSSYTYINVLQKI</aaseq>

Gene Sequence

<dnaseqindica>182..369#731..801#961..1025#1125..1169#1260..1340#1727..1794#2332..2380#2720..2877#3242..3305#gccggaagtcgtcgacgtcgaggggacgaggagcccaccggcgagcggtggcgccacgggggaggaaggcggcgagctgggcgtcggcgagaactcgaggagaccgacgagaggccagtccaccaccgcgcagccacacaggcacggggaagagtggcgcgcgcggccgccggagaaggctatggcgtggatctggatgctcatggcggcgggggccgtgctcctgtgggcggtttctctggggcgggtgctctcctcctcctcgccggcgtgtctgcctgccaactccaccttcctctcccctcctcgcggcgacaggatgagccggaatgtcctcctcgttctcgcccaccccgacgacgaatccatgtactgcttcttcctcctcatgtctcttatcgtttgcgagcctcgctgtgtaaatcgtggggctacagttccagtaaccgctaacaatgaagcttaataggctaactcctgtgcacggtacctgctcgatgaaattcctgaacaagtgaacagtttttttttttttgagctaagggagcattctccctccatttccatttaacagaaatgaaacaaagttcttacaaaagcaggatgattacagaaatgaaactaagtgaacagctgaactttttattattttgtggaactgtttaggggaaatcttgtttatagtatttgttttggttgattctgattgattgtcatgttgctgatacaggttttttgctccgactattcttttcctcaagtcaaaaggtcacagcattcatatcttgtgcttgtctcaaggtaaaagacgtctacactctgatcctatgtgcgtatttcgcttttccagtatgtctcagctcaatcatatgtatttctactctttaagggcgccattatttggataagaaacctcatctgagtcggtcgttctgattgtcaatttaatccccatattaggcaatgctgatggccttggaaatatccgcaaagaggaactctaccttgcctgtgtcactcttaaggtaataagtcctactctgctccattataccccttggagagggtcttttgacctcggttgtccattgaaaaatgtgttgaaatggatcatgtatttacagattccagctgagcaagttaaagtcttggaccactcagaactgcaggtgctttattatgagctcatttttgccgacctgcttgtatgtaggtactgttccaaatatatacttaagtttacacaatgtaccttgtaggatggatttcataaaaattgggatcatggactaatagcagaacttaccctggcacaatcccagttatggaatatcgacacggtaatgattccatgtcaagattcagatgatctcccagtaataataattcatatctatactctatcaactttggtgctttcctgtattatgtttcgcttcgagctttactgttctgaacaactttaaaaataaaaaatatagtgaagaaacaggagcatcaagtgcgcctatctgtattatatgccatttaaaactgtattagttaatctgttccaaatctcagtgcggtgttgctgcaaacaggtacccaggttgagtacatcatatgattgtgcaagtgaaatgcctttttcgtcctgattttctagacctcaaaatatggaaattttgcattttgttcattccgattcccctatttactcctgcaatatttgttgtcattttagattgttgccttcgattcccgaggagtatcaggccatccaaatcattgcgatgttcatcatggaatctggttagttcaactttgttgtttagcatttttagaataacaactgtttgagtttgatgccctcttgtaagaaaaattttctggtactgatgtattttatattgttagcttgtccgcacaagcttctataatatctacatagttgttaagttacatatcttgtcaagtcacaacatgttctgccgaaagaaagtgtattacctaacttcaacataactgtggcctcccctttcccatcaccacacccctttgtaagggttctctctttctctcccatgatctcatccctttcatgcatatataatataagttgttttggggtcacactttaattgaacagtttggctaattcatgtatgtcatgactatggcctgtagctcttggttggtgatgtgcacttattccatctatttaatgccggatttgcttacatttctttcacttatgacagtctagattacacatatgtagcatatttctgcagggtgtttctagcatttttctttggagtcttaataaatctatttttctatgaacagcaagcttctgcgtgacaacgggcaaggacacattgaagcatgggagcttgtaaaattcttccctgatatcctagctttattttcttcacgttgccatatactctacttattccagagtctaaaagagcctgtgcattgctttcttgaatttatgaattgcgtgcttaaatgcattgatatcatcattttcgttggaagtaaagacagaaaacaataacactacacatgccttctctgcatagatttgaattgcttgatgtgtctatctcatttgatggctaatttctatgatttttattggcactaggctagttaacctctaaacaattccctgtgaatacattaatttgaagaagctaacctggattatgcctgtttatttggataggtaagcttgaacatttttcgcaagtacagtggtccagttgacatttggctatcttccaccctctcctcaagctcaaaacaaccaacttatactcttgttaataatagcccttccagaagctttgaggcaatggcttcacacaaaagccagtgggtttggtaagttgaaaattttgttttcactacttaaatgttgtctacttctaggaagtactatatatattgtgtggttcaaaattatcacttaaaaagaagtttctaccttgcaatatagacgtagtacctcataagaatcatccctttgacacccaaaaaaagtcatggccaacatatacaatctcaattgtttctttgactactgtaagactggttgtttgtatttttgagaactcattgttagacttgttttttgtgtgatactgcatgatgggaaagaaatgaagcatttaaggggctcaaaattctcaaaacttgtgtgttttacaatatattcaggaaactgacattttgcttgtgtttataggttcaggagattgtttgtcctattctcaagctacacatacataaatgtgctccaaaaaatttgaagtttgttgtcgtgccaaagcaagcaccttccggctcagattgtcaaatgcctgtacatgcagagtgccagagtgtaagcgggaagcttctctgaagaaagacaacaatgttgacattggatcaggaattcgaaagatactgaaatgtgatgatgaaatgcaacagtttaggaacctttgtgattatatgccctttatacttgtgttgtaggccatcgattgtgttcatagagttagattggacctctgtatcctcagctagtttctcttgcttgaagagttattgccgttgttggacgatcaatctatattgcagtgttacacaaggtaactgatgaactgatattactatgctgtcgctcaagctgtattcaagcc</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0678800, RefSeq:Os04g0678800