Os03g0101200

From RiceWiki
Revision as of 19:26, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os03g0101200

Description

Protein kinase-like domain containing protein

Version

NM_001055186.1 GI:115450100 GeneID:4331285

Length

3726 bp

Definition

Oryza sativa Japonica Group Os03g0101200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:88869..92594

Sequence Coding Region

88869..89096,89190..89924,90090..90518,90582..90716,91102..91382
,91634..91809,91899..92011,92157..92278,92375..92594

Expression

GEO Profiles:Os03g0101200

Genome Context

<gbrowseImage1> name=NC_008396:88869..92594 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:88869..92594 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggatcctgatcctcttcctctcctctccttagggcatgtgaatgtgtcagagatgatggcgcctcctctcactgttggattggctctcactgactctaaatccagcacctacgccctccaatgggctttgtccaggtttaagtttaccaaagatgacgacgcccccatcttccttcttattcatgtcctcactaaactcttgacagtacccacacccatggggaaccatatcccaattgataaagtccgaaccgatgttgctgatgcctacttcaaggatgtacaccaccaggcacaacaaatgctcctcctctacaaaaacatgtgccatcaaaacaaggtgaaagctcaagtattgcttatcaagggcaacgacgtgtcacaaactgtttccactgttgtttctgactatcaaataaagatcctcatcgtcggtgtcactgctaggactaggaagccatttggaaataggacatcctccaaaatttgcaagaatgtcccaagcttttgcacagcttatcttgtatcaaaagatggattgtcttcgctttattcttcttcattagaaagtgacttagcgtcgagctccaagagtgatgatctttcagatgaaatgtcttcaagctcagtaacttccaataatagttcagaccagagcccgtttgattctccaaggctgctaggctccaacttaccatcagagaaccctaaaaatagttcccctgcacaccgtaaccgttcacttactctatacgattatctcaatggaagcacttcaatatatcctgacaaggatagaagagttaactcttccactggtacggaaagctccaaacctagtgaactgaaggggtcaaatgaggtgctaagacaagaaagcttgctgcagggaatgctttcagacaacaaggaccatatcagtacagagcttgaaaagctaaggcttgaactgaggcttatacaggggaaacataaacttgttcaggatgagtccgatgatgcatcacgccaggcaagtaaagtggatttgatatgctatcaaagaatggctgaattagctgcaaagcgcatggaagaggaagctcaactaagagagatacaatctaggctggataaggccaacgacaacgtagagaagcagaaggcgcatcgatatgctgcagagcaggcgctgaaccatgtgcaggatcttgtaagaggggaggttatgcagaaaaatatgctgcaggtgaaagcatcccgtgatgctgataagaagttgagactggagaagctctttgtgcttcagggcaactcatactcaacgtttacatgggaggagattgataacgctacatcatcattcgcggacaatctcaagattggaagtggagctaacggaacagtatataaggggtatctcaatcactcagctgtggcaataaaggtcctccattctgatgacaattccagtaacaagcatttcaggcaagagcttgaggttctggggaagatacatcacccgcatctggtgatgctcctgggagcgtgtgtggagagggggtgcctggtgtacgagtacatggagaatggcagcctggaggagcggctgcggtgcaaaagcggtacggcggcgctgccgtggtgtgaccggctgcgcatcgcctgggaggttgcctctgcccttgtgttcctccacagcagcaaaccaaacccaatcattcaccgggacctcaagcctgagaacatcctcctggacggcaacctggtgagcaaggttggtgatgtggggctgtcaacactggtgtcaagtggtagtggtggcagtagcagtaccatgtacaagaagacggctctggctgggacgctgttctacatagacccagagtaccagaggagcgggcaggtgtcggtgaagtcggacacgtacgcgcttggcatggtgatgctgcagctgctcacggcgagggcacccatcgggctggcggaggtggtggagcgagcggtggaggacggcaagttgagggacatcctggatgagaatgcagggtggacttgggccatggaagaggcgcaggagatggctgacctagcgctcaggtgcctggagatgagaggcaaggaccgtcctgacctcaagaccagggtcgccgtcgacctggaccgcctcaaacgccgggcactgccaacgcagccgccgccggagcacttcatctgccccatactcaagagggttatgcaagagccgtgcatcgcgtcggacggctactcgtacgagcgccacgccattgagatgtgggtgtgcgacaaggatgtgtctccggtcaccaatgttcggatgccaaacaagacacttgtgcccaaccgctctctgctcaccgccatcactgcctggaagtcccagggtggccgcaaacccacaaataaatttgttactacttctccgaatcatttgtga</cdnaseq>

Protein Sequence

<aaseq>MDPDPLPLLSLGHVNVSEMMAPPLTVGLALTDSKSSTYALQWAL SRFKFTKDDDAPIFLLIHVLTKLLTVPTPMGNHIPIDKVRTDVADAYFKDVHHQAQQM LLLYKNMCHQNKVKAQVLLIKGNDVSQTVSTVVSDYQIKILIVGVTARTRKPFGNRTS SKICKNVPSFCTAYLVSKDGLSSLYSSSLESDLASSSKSDDLSDEMSSSSVTSNNSSD QSPFDSPRLLGSNLPSENPKNSSPAHRNRSLTLYDYLNGSTSIYPDKDRRVNSSTGTE SSKPSELKGSNEVLRQESLLQGMLSDNKDHISTELEKLRLELRLIQGKHKLVQDESDD ASRQASKVDLICYQRMAELAAKRMEEEAQLREIQSRLDKANDNVEKQKAHRYAAEQAL NHVQDLVRGEVMQKNMLQVKASRDADKKLRLEKLFVLQGNSYSTFTWEEIDNATSSFA DNLKIGSGANGTVYKGYLNHSAVAIKVLHSDDNSSNKHFRQELEVLGKIHHPHLVMLL GACVERGCLVYEYMENGSLEERLRCKSGTAALPWCDRLRIAWEVASALVFLHSSKPNP IIHRDLKPENILLDGNLVSKVGDVGLSTLVSSGSGGSSSTMYKKTALAGTLFYIDPEY QRSGQVSVKSDTYALGMVMLQLLTARAPIGLAEVVERAVEDGKLRDILDENAGWTWAM EEAQEMADLALRCLEMRGKDRPDLKTRVAVDLDRLKRRALPTQPPPEHFICPILKRVM QEPCIASDGYSYERHAIEMWVCDKDVSPVTNVRMPNKTLVPNRSLLTAITAWKSQGGR KPTNKFVTTSPNHL</aaseq>

Gene Sequence

<dnaseqindica>3499..3726#2671..3405#2077..2505#1879..2013#1213..1493#786..961#584..696#317..438#1..220#atggatcctgatcctcttcctctcctctccttagggcatgtgaatgtgtcagagatgatggcgcctcctctcactgttggattggctctcactgactctaaatccagcacctacgccctccaatgggctttgtccaggtttaagtttaccaaagatgacgacgcccccatcttccttcttattcatgtcctcactaaactcttgacagtacccacacccagtaattatcctatccctccctctcttcttcttattatgcgtccatccattctttcttttgcatatcaatcttgctacttaaaatatttacatgcagtggggaaccatatcccaattgataaagtccgaaccgatgttgctgatgcctacttcaaggatgtacaccaccaggcacaacaaatgctcctcctctacaaaaacatgtgccatcaaaacaaggttttactttctttctttctttctgctgtctcacctgtccttccttcctagtaacatgtagtactagtaacaagtatatatgtgtatgtgcgtagcctaccatttcctatttttataatttaagcgcttaatcaactgacctcaggtgaaagctcaagtattgcttatcaagggcaacgacgtgtcacaaactgtttccactgttgtttctgactatcaaataaagatcctcatcgtcggtgtcactgctaggactaggtaatctgactttcgccacaccaattcactaaaaaataaaccaatatacatgcatagtattgttgatgattcgacgaaatgtccttcaggaagccatttggaaataggacatcctccaaaatttgcaagaatgtcccaagcttttgcacagcttatcttgtatcaaaagatggattgtcttcgctttattcttcttcattagaaagtgacttagcgtcgagctccaagagtgatgatctttcagatgaaatgtcttcaagctcaggtaaggacttgtcaagctaagacggaatatttctagtatgctgcttttttcctgtgcatctctgctgtgcaatataatttcttctttcccatttctccttatttacttattactgctgaaaaatgaaaaactatagcagacttgcaggaaggtataagcatattgttttcaatatttattctgctcttcaacatgttgacctccatattccccttgtcatcatctgaaggttacttgttcccttgcttcagtaacttccaataatagttcagaccagagcccgtttgattctccaaggctgctaggctccaacttaccatcagagaaccctaaaaatagttcccctgcacaccgtaaccgttcacttactctatacgattatctcaatggaagcacttcaatatatcctgacaaggatagaagagttaactcttccactggtacggaaagctccaaacctagtgaactgaaggggtcaaatgaggtgctaagacaagaaagcttgctgcagggaatgctttcagacaacaaggttagttgtgcaattcgttggtgattgactcgttgtgaattttggacttctggtgacatgcacatgcatcttcagtgaatgttgtatttaaacttgtgctgttgatccacaactttggtgatgtgcacatcatcagtgaacgctgtttttaagcctccagtgatttgatatcacgttgttaatagacagataaattcagaggactcctttcttaaactttgctacagtactttgtttacctgtaatcacattggtaatcgacattatcaattaccatcagattgatgatattagatttactgcctacttgttgaatttatcaggtattcctgcctcagtcaggtaaatgtttgcttagaccttgtgattacttgttataacgcaggaccatatcagtacagagcttgaaaagctaaggcttgaactgaggcttatacaggggaaacataaacttgttcaggatgagtccgatgatgcatcacgccaggcaagtaaagtggatttgatatgctatcaaagagtatgagttcacagatgcagcacatgtccaaaccatcttacttgtgatctttattgatgccagatggctgaattagctgcaaagcgcatggaagaggaagctcaactaagagagatacaatctaggctggataaggccaacgacaacgtagagaagcagaaggcgcatcgatatgctgcagagcaggcgctgaaccatgtgcaggatcttgtaagaggggaggttatgcagaaaaatatgctgcaggtgaaagcatcccgtgatgctgataagaagttgagactggagaagctctttgtgcttcagggcaactcatactcaacgtttacatgggaggagattgataacgctacatcatcattcgcggacaatctcaagattggaagtggagctaacggaacagtatataaggggtatctcaatcactcagctgtggcaataaaggtcctccattctgatgacaattccagtaacaagcatttcaggcaagaggtactagtacccgaattaaattatatgctttcatactaacaaacagttaggataggcatacatcatatcaccttatttttaatattcatagcatagttgaactgccatgccaagcatgtatgtagagcaaaagtgtaatacagtattaagaagttaattttgcagcttgaggttctggggaagatacatcacccgcatctggtgatgctcctgggagcgtgtgtggagagggggtgcctggtgtacgagtacatggagaatggcagcctggaggagcggctgcggtgcaaaagcggtacggcggcgctgccgtggtgtgaccggctgcgcatcgcctgggaggttgcctctgcccttgtgttcctccacagcagcaaaccaaacccaatcattcaccgggacctcaagcctgagaacatcctcctggacggcaacctggtgagcaaggttggtgatgtggggctgtcaacactggtgtcaagtggtagtggtggcagtagcagtaccatgtacaagaagacggctctggctgggacgctgttctacatagacccagagtaccagaggagcgggcaggtgtcggtgaagtcggacacgtacgcgcttggcatggtgatgctgcagctgctcacggcgagggcacccatcgggctggcggaggtggtggagcgagcggtggaggacggcaagttgagggacatcctggatgagaatgcagggtggacttgggccatggaagaggcgcaggagatggctgacctagcgctcaggtgcctggagatgagaggcaaggaccgtcctgacctcaagaccagggtcgccgtcgacctggaccgcctcaaacgccgggcactgccaacgcagccgccgccggagcacttcatctgccccatactcaaggtccctgtctctgtctcttcttcttattattgccttggcaagcttgcaaatgcaaactcctaactaacacctcatccatgagatgcaatgcagagggttatgcaagagccgtgcatcgcgtcggacggctactcgtacgagcgccacgccattgagatgtgggtgtgcgacaaggatgtgtctccggtcaccaatgttcggatgccaaacaagacacttgtgcccaaccgctctctgctcaccgccatcactgcctggaagtcccagggtggccgcaaacccacaaataaatttgttactacttctccgaatcatttgtga</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0101200, RefSeq:Os03g0101200