Os03g0172000
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Contents
Annotated Information
Function
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Expression
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Evolution
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References
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Structured Information
| Gene Name |
Os03g0172000 |
|---|---|
| Description |
Peptidase S59, nucleoporin family protein |
| Version |
NM_001055651.1 GI:115451030 GeneID:4331780 |
| Length |
4924 bp |
| Definition |
Oryza sativa Japonica Group Os03g0172000, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 3:3837783..3842706 |
| Sequence Coding Region |
3838179..3840638,3840784..3840907,3841190..3841335,3841410..3841507,3841862..3842051 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008396:3837783..3842706 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008396:3837783..3842706 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atgtcttccgacccggtgttccccgtgctccgccatggcgattacttcaccaagccgtcgatcgatgagctggtggagagggaggcggctgaccctggctactgcagcagggtcccggatttcgtcgtcgggagggtcgggtatgggcgaattcacttccccggtgacactgatgtgagggggatggacctgaatgggatcgttaagttcggtaggcactctgtggaggtttacaaggatgaggctagcaagccgcctttagggcaaggtcttaataagccagcagaagtgacgttgatgctgaatttgagcgtgcttccagagcctagcgctcttggggagttgcttaagtgtcaaacgagaaagcaaggcgctaggttcgtttcgttcaaccactcgagcggcaggtggaagttcgaggttgatcattttagtcgattcggtcttgtggacgaggaggaagaggatgttgtgatggatgaggtggttgttcggcagcctattgcggaagtaagagacccacctgcaaatggtcatgagctggagctttcacgttcgttgcctgctcatcttgggcttgaccctgcaaagatgcatgaaatgcggatgacgatgttctccaatgaggaaggtgatgaagatatggaggatggattcccatctgatcagagatacttcagcagtgagaagatgaatgtggattcaccgaactcaagtgctaaaggtttgaggctaaggtctctctctcctttgcatggttcttctctgaaagtcagcaggagacctggtgtaattggtaggagagaaccacaggctctgctggaatacagtgtaaattcttcagaacatggcccatcttctcatggtattcttatgtctgggcaaaacaagggatttccagtgagaatgaccaaggtggatggctttaagttgccatctgatcaggaaactcctgtggctgggaacgtatattccaattgtgttgtggatgctgctttatttatgggcaggtcatttcgtgttggttggggaccaaatggcatccttgtacattctggcagtcttgtcaatagacccggaactggtctatcttctgttattcacatagagaaagttgcaggcgacaaagttgtacgtgatgagaagaacaaaattaaggaggagctgactgatctgtgcttctcagacccgctggatctccataggaggcttcatcatgaatatctggagactgagtctgacttgtttaaattgaagcttcagaaggttgtggcaagtcgctttgtgttgccagatatttgcagatcttatattgacatcattgaaaggcagcttgaagtcagtgatttatctatgtcttctcgtgtgctgttaatgcaccaggttacagtttgggagcttattcgggtcttgttctcagaaagagcaactggtaaccagttagagcctactggtgatgaggaccaggaggggatgattttagataagaaagaaggtactgttgccatagaccttgaagcactccctttggttagaagagcagactttagcaattggttacaggacagtgtttgtcatcgggttcaaggagaggcgggctccttaaatgatgccaggtatctggaacatattattctgcttttgactggtcggcaattagacacagccacagaagttgctgcctttaggggtgatgttcgactggcaattttgctaagccaggcaggtgggtcaatgctaaatcgttctgacctttctcagcaactggatctatggaaaacaaatggtctggattttgattatattcaggaagacaggttaaagatatatgagttgctttctggtaatgtacaaggcgcgttggtagattcatcaattgactggaaacggtaccttggtttaataatgtggtatcaactatcacctgatgcatcacttgatattatcattcactcttatcaccagctccttggtgagggcaaagtcccatatcctgtacctgtatatatagatgaaggaccccttgatgagtcacttcaatggtccccaggtgaccgctttgacatatccttttatctaatgctgcttcatgcaaatcaagacgagaagtttgggatgctaaaaactatgttcagtgcattctcatcttcatatgatcccttggactaccatatgatctggcatcagtgttccattctggaagctatcggtgctttcagttcaaatgatcttcatgtgctagatttgagttttgtttaccaattattgtgtctggggaagtgccattgggctatctatgtcattctacatatgcctcatcttgatgacgccccatacatccatgagaagttgatcagggaaattttgtcacaatattgcgaatcatggagcaaggatgaaactcagagagtttatattgcagaacttggtattccagtagaatggatgcatgacgctctggctctttacaatgaatactatggagatcagcaaagcgcactggagaattatattctgtgtggcaactggaagaaagcccatacaattttcatgacatccattgctcattctttgtttctgtcatctaagcatcaagagatctgggacattacaagctctttggaggttcacaagtctgaaattgctgactgggaacttagtgctggaatatacatagacttcttcattctaagaaattctatgcaagaaaaaagtaccatggatgatccagatcaacttgagaagaaaaatgaatcatgcagcactttctttggccggttaaatgattcattgatagtctggggaagtaaattacctgttgaggcaagggcatgcttctcgaagatggcagaggagctgtgcgagctactaatgaactcccccggcgagggcttgacgccagatctctacatgggctgctttcagacgatgcttaacgctcctgtgcccgacgaccacaggtcatcctacctgcaagaggcggtctctgttttcaccgacatactttgcagggactga</cdnaseq> |
| Protein Sequence |
<aaseq>MSSDPVFPVLRHGDYFTKPSIDELVEREAADPGYCSRVPDFVVG RVGYGRIHFPGDTDVRGMDLNGIVKFGRHSVEVYKDEASKPPLGQGLNKPAEVTLMLN LSVLPEPSALGELLKCQTRKQGARFVSFNHSSGRWKFEVDHFSRFGLVDEEEEDVVMD EVVVRQPIAEVRDPPANGHELELSRSLPAHLGLDPAKMHEMRMTMFSNEEGDEDMEDG FPSDQRYFSSEKMNVDSPNSSAKGLRLRSLSPLHGSSLKVSRRPGVIGRREPQALLEY SVNSSEHGPSSHGILMSGQNKGFPVRMTKVDGFKLPSDQETPVAGNVYSNCVVDAALF MGRSFRVGWGPNGILVHSGSLVNRPGTGLSSVIHIEKVAGDKVVRDEKNKIKEELTDL CFSDPLDLHRRLHHEYLETESDLFKLKLQKVVASRFVLPDICRSYIDIIERQLEVSDL SMSSRVLLMHQVTVWELIRVLFSERATGNQLEPTGDEDQEGMILDKKEGTVAIDLEAL PLVRRADFSNWLQDSVCHRVQGEAGSLNDARYLEHIILLLTGRQLDTATEVAAFRGDV RLAILLSQAGGSMLNRSDLSQQLDLWKTNGLDFDYIQEDRLKIYELLSGNVQGALVDS SIDWKRYLGLIMWYQLSPDASLDIIIHSYHQLLGEGKVPYPVPVYIDEGPLDESLQWS PGDRFDISFYLMLLHANQDEKFGMLKTMFSAFSSSYDPLDYHMIWHQCSILEAIGAFS SNDLHVLDLSFVYQLLCLGKCHWAIYVILHMPHLDDAPYIHEKLIREILSQYCESWSK DETQRVYIAELGIPVEWMHDALALYNEYYGDQQSALENYILCGNWKKAHTIFMTSIAH SLFLSSKHQEIWDITSSLEVHKSEIADWELSAGIYIDFFILRNSMQEKSTMDDPDQLE KKNESCSTFFGRLNDSLIVWGSKLPVEARACFSKMAEELCELLMNSPGEGLTPDLYMG CFQTMLNAPVPDDHRSSYLQEAVSVFTDILCRD</aaseq> |
| Gene Sequence |
<dnaseqindica>397..2856#3002..3125#3408..3553#3628..3725#4080..4269#ggccgccgctccgctccgctcaagccgccgcctcctcctcttccccctcgcggcggctgcggcggcgtcctccccgccggcgaacctcctcgccctcgaaggtaaccgctctcctcccgtagccctcctcccctcccgaccccctgcgcagtctccgcgcggagatccacccgcagttcattccccttgttcaaatctaatccgaatctctcctcctctcgaaccccctgcagtttgttgggggattttgtttgcagcagttggtttcccaagtgaggagaagaatctgaatctggagtggtttggtggagcgaagggcttggctgcgcatgaagctatgaagtccggcggcgctagggcttgctgattctgtctcggttgcctcattggcctgccatgtcttccgacccggtgttccccgtgctccgccatggcgattacttcaccaagccgtcgatcgatgagctggtggagagggaggcggctgaccctggctactgcagcagggtcccggatttcgtcgtcgggagggtcgggtatgggcgaattcacttccccggtgacactgatgtgagggggatggacctgaatgggatcgttaagttcggtaggcactctgtggaggtttacaaggatgaggctagcaagccgcctttagggcaaggtcttaataagccagcagaagtgacgttgatgctgaatttgagcgtgcttccagagcctagcgctcttggggagttgcttaagtgtcaaacgagaaagcaaggcgctaggttcgtttcgttcaaccactcgagcggcaggtggaagttcgaggttgatcattttagtcgattcggtcttgtggacgaggaggaagaggatgttgtgatggatgaggtggttgttcggcagcctattgcggaagtaagagacccacctgcaaatggtcatgagctggagctttcacgttcgttgcctgctcatcttgggcttgaccctgcaaagatgcatgaaatgcggatgacgatgttctccaatgaggaaggtgatgaagatatggaggatggattcccatctgatcagagatacttcagcagtgagaagatgaatgtggattcaccgaactcaagtgctaaaggtttgaggctaaggtctctctctcctttgcatggttcttctctgaaagtcagcaggagacctggtgtaattggtaggagagaaccacaggctctgctggaatacagtgtaaattcttcagaacatggcccatcttctcatggtattcttatgtctgggcaaaacaagggatttccagtgagaatgaccaaggtggatggctttaagttgccatctgatcaggaaactcctgtggctgggaacgtatattccaattgtgttgtggatgctgctttatttatgggcaggtcatttcgtgttggttggggaccaaatggcatccttgtacattctggcagtcttgtcaatagacccggaactggtctatcttctgttattcacatagagaaagttgcaggcgacaaagttgtacgtgatgagaagaacaaaattaaggaggagctgactgatctgtgcttctcagacccgctggatctccataggaggcttcatcatgaatatctggagactgagtctgacttgtttaaattgaagcttcagaaggttgtggcaagtcgctttgtgttgccagatatttgcagatcttatattgacatcattgaaaggcagcttgaagtcagtgatttatctatgtcttctcgtgtgctgttaatgcaccaggttacagtttgggagcttattcgggtcttgttctcagaaagagcaactggtaaccagttagagcctactggtgatgaggaccaggaggggatgattttagataagaaagaaggtactgttgccatagaccttgaagcactccctttggttagaagagcagactttagcaattggttacaggacagtgtttgtcatcgggttcaaggagaggcgggctccttaaatgatgccaggtatctggaacatattattctgcttttgactggtcggcaattagacacagccacagaagttgctgcctttaggggtgatgttcgactggcaattttgctaagccaggcaggtgggtcaatgctaaatcgttctgacctttctcagcaactggatctatggaaaacaaatggtctggattttgattatattcaggaagacaggttaaagatatatgagttgctttctggtaatgtacaaggcgcgttggtagattcatcaattgactggaaacggtaccttggtttaataatgtggtatcaactatcacctgatgcatcacttgatattatcattcactcttatcaccagctccttggtgagggcaaagtcccatatcctgtacctgtatatatagatgaaggaccccttgatgagtcacttcaatggtccccaggtgaccgctttgacatatccttttatctaatgctgcttcatgcaaatcaagacgagaagtttgggatgctaaaaactatgttcagtgcattctcatcttcatatgatcccttggactaccatatgatctggcatcagtgttccattctggaagctatcggtgctttcagttcaaatgatcttcatgtgctagatttgagttttgtttaccaattattgtgtctggggaagtgccattgggctatctatgtcattctacatatgcctcatcttgatgacgccccatacatccatgagaagttgatcagggaaattttgtcacaatattgcgaatcatggagcaaggatgaaactcagagagtttatattgcagaacttggtattccagtagaatggatgcatgacgctctggtgagtagcaacttcgttttatacaaattttctgatagaaatgcatgtagctttaaaagtgaaatgagcattgcaaattcttaagaatgccactaccaggaaaatattgcacttcaaccttgtgtaactgattatctttatacaggctctttacaatgaatactatggagatcagcaaagcgcactggagaattatattctgtgtggcaactggaagaaagcccatacaattttcatgacatccattgctcattctttgtttctgtcatgtaagtttttcatacattactctaaacaaataggttttctaaatactctaattcagttttgcgccttgtttcctgtacataaatgtacaactatattgaccccaaaacctaataatatgaagcttcttacagatatctttgttattctgtttaaatattttttgttcatatgtttcatgaaggtgtcttatagattttttttctgcttgtgttgataaatattgcatggttgtcatcatggtatgagttttcaaccagacgttctgttaacccatttttcagctaagcatcaagagatctgggacattacaagctctttggaggttcacaagtctgaaattgctgactgggaacttagtgctggaatatacatagacttcttcattctaagaaattctatgcaagaaaaaagtaccatggatgatccagtaagtttttgttttttacagtttcaacatgttcctgaaagttgtggataacacaaccttgttttatctttcaggatcaacttgagaagaaaaatgaatcatgcagcactttctttggccggttaaatgattcattgatagtctggggaagtaaattacctgttgaggcaaggtaagatgtgattctatgttgtaacagatccagaacttgaaaagaaatcaaatatcgatctctgcgtgaaattactgccacttatttttcatgtttaaagtgaagcagcctcagtccgaacgacataacacagtgaattcgtaaccggttttgcaataagctattttcattttgccaggattatatatttcaatccaaaaccaaactatggccagtgtggaaattcatggtcattacacgatcatgcacggacaatctgactatgtctattttgagttcaacacatactggtgcattttctaggcttctttttgaatctattctcaggatttgttctcaattttgagtatgcagggcatgcttctcgaagatggcagaggagctgtgcgagctactaatgaactcccccggcgagggcttgacgccagatctctacatgggctgctttcagacgatgcttaacgctcctgtgcccgacgaccacaggtcatcctacctgcaagaggcggtctctgttttcaccgacatactttgcagggactgatgcatgattgcttgaagatccatggcattctatgatatctgcagaattgttggaagtttccctgatctatctattgggttttaacctattggttattctgatcatacacgggatctgggtgcacaagaagctcccggctgccaagtcgcaagtcagtaatacagtgaagagctccaaaagttcgtcccttgcccgagtgcagtgaggaaatgtagatcagctattgatggtgcagataactgccatgctcatcaaactcctgaagaatgtataagctgtgtgctaagctgtaccaatcaactttcagatgtgagctgtacccgtcatctttgttcgtttttgtactgtaatactgttacaacggaaagcagcaaatcgtgtacggtgtatgttgtgctgaagagctcgacgaagataaagcatccagctgggcccaattctcggcaatacatgcacgattccacccttccatggacgtgggagcaagctgcatatttctcttcttcagtcgaggtactttttcacagcttatgatgaggttatcccgaaaatactgtggtgtactttttcagagcttatgggattattccgaaaatactgaggttttacggagctgtaggcctgtaacaattgcaaggggatatttttttttctc</dnaseqindica> 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