Os09g0257766

From RiceWiki
Revision as of 20:55, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os09g0257766

Description

Zinc finger, CCHC-type domain containing protein

Version

NM_001188808.1 GI:297726746 GeneID:9269384

Length

4929 bp

Definition

Oryza sativa Japonica Group Os09g0257766, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:4906561..4911489

Sequence Coding Region

4906719..4907759

Expression

GEO Profiles:Os09g0257766

Genome Context

<gbrowseImage1> name=NC_008402:4906561..4911489 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:4906561..4911489 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgatgaagcaacagatgattgacaatagtgccaaaatcgtatccccagatactgtgaccacatcaacacgctattgtcacaagtttgcagagttcatgaaaacaaggccacccacttttgcaggatcagccacatcttggtatactgaccaatggcttggcaccattgaaaacaaattagatatggtgcaatgcgatgagaagaacaaagtattctatgctgctcatcagttacaaggagctgcattggaatgttggaaaggttattgtgcaaccgataaagacccacaagccatcagttgggctgagttttcttctattttgcactatatggatgtttctccagggtttattaaaacaaaggaccacacaaaggatggtgtttgcacactctgcagccaaggctatcgctatgagctgatgtggtgcccacggaacaagccaagaaactgtgcatgtgctcgttgtggggagattggacacagcgccagcgagcacgaaatcagctgctctagctgtgaacaaagccatctactcggagagtgccccatgagcaagctcacttgttacctttgtgaaggtgatgatcatgtcccaattaaatgccccttgagttcaatactcactactgtgactcaacatcaacgagaagcttaccaagaagttatacaacaggtaataggagaaacaaataagataatagtaactccagttaagaagttcagagaagtagatgatagtagccttcaataccaatgtaaaaggggcagtgaatcagcatccaaagttgcatgctctgcttgtggtgagcaaggtgaagcagcctcctataaagccaagtgtatgtcaaagacacgaaaggcttcatcgaaaacgaaaaatgtcgtatgtttcagctgcaatgagatgggccattttgctaatcgatgtccacttagacatcagacacctgctcaagacaaaaccattccaaaagctattctgaccaagagaacaacaccaacaacaggtggtgaaggtaaaaaacgacgcaaattatag</cdnaseq>

Protein Sequence

<aaseq>MMKQQMIDNSAKIVSPDTVTTSTRYCHKFAEFMKTRPPTFAGSA TSWYTDQWLGTIENKLDMVQCDEKNKVFYAAHQLQGAALECWKGYCATDKDPQAISWA EFSSILHYMDVSPGFIKTKDHTKDGVCTLCSQGYRYELMWCPRNKPRNCACARCGEIG HSASEHEISCSSCEQSHLLGECPMSKLTCYLCEGDDHVPIKCPLSSILTTVTQHQREA YQEVIQQVIGETNKIIVTPVKKFREVDDSSLQYQCKRGSESASKVACSACGEQGEAAS YKAKCMSKTRKASSKTKNVVCFSCNEMGHFANRCPLRHQTPAQDKTIPKAILTKRTTP TTGGEGKKRRKL</aaseq>

Gene Sequence

<dnaseqindica>3731..4771#tcgagttgcaatcgattgctcgacccgctcccctcgtcttacacggcctcgtcgagccgcgccctaaccccccgccgccgccactgccggatccctcctcccccgagttcctcgccgagaatctaaggtactcatccaatccgaccacccctccccttctccccgtcctcaaccgcgttgccgtcgccgaccaccgctctgcccgccgctctccactgcttgtgttgcagggggggagatatcgcgctgccctcattttttttttctttcgaccgatgcatggaggcacggggcttgtctgcaatggattccatcgagatgaccttcggggaatacatcttctagacgaattcgaaacaatatcccccctaccctaaaccgatttcattatttctaaactttcttaagagcttgctgttgcttgaggcaggagaaaggacaggaagctgtaagcctggaatagaagctggaacaatacaagctaaaggtgagacgaccatgatgagctataaggcaagtaatgccattgatcatgtttgatcccattagttatgtgggattattcggatttggtaattctattttttgatgagatgacagatagttatgagctcaagttatcattaattataatcttcttgatactgaaaatgatattctttgattgacctaggtctaagaagtatagtattcatggattgatgatattctttgttagtagagaacactatgcacaatgatacacactcacacttaaatgtttatatgacaaatcatcactcataaatttgctatgctcaaactcctattgctgaaggtgaggtggttgtgaatggtggtcttatggtttgtggattgttgcctcacctgaagcattcgagaagaaaattgctatgctgaaacttctacagctgaaaatgaggtggttgtgaatgctggtcttatggtttttggattgttgcctcatctgaagcacttgagaacaaaatacccttgaatcatacaagtgataggattaaagtctatctttgaccaaaatacatctgatctcttcatgtcaaatagaagcgattccagctttcaaaaacacgcacatataggggcaccacttcccaaaacgaccagggtgcaacaagatctctcctgtctgacagttttctttaatattaacatggtaacctgaacaactaacggaacactcacacaccttaattagatcctcccaaattcaagatcaatcaaccaacttcagctctagcagcagtgcacagagtctctcttagcagcacacaccttaggttcactttgccacctcgaccatcttgatgattggtcttgctttgtctccggccttgccaggatttgccagtgttgcaaaaaggagaaataagtgcaaattgtagacgtaggacaactccctaccaattgctgccggaagaccatgttacttctactttttcagaagctcgaacagatgactccaaaaagactaatcaggaaaccctttttctttgatccagctcttcctacaatatccacaaataactcttctgtggacctggaccagtccgccctgtagaatctctctataaacgctccacacatcctgttctaaaagtaaaacacagcctcagctctaaaactgggtaaaactcgcccccaactcccaaaactaggtagacctttgttttctaatggttttggagttctacctagtgatatcagaggttgaggaacgagttttacccagttttggattatttgaatcaagagcttgttcaactagaagatcaatatgtcaacctgtctatactgctctcttggagaagtcctacaggatggggacttatcgtcatgctcttgtgtgaattgtaactctgaatggctcaccttggtttgtctctcacaatgataagttattattgcaatttattcgttcatcactcacttcgtgtctgtctttaagccatgctctaacatgtccttgctgctttgatgagtttctctagacaccatccatgtcagtttgtattccactatcatgagaatcatagttatcaaccaaatttgttttttcacataactaccgataggaaccaaagccacctttgccattagcctcattatagggagtattatacttggagtgcatatcaccatttcctagaacagtgtttctctattatctctgtcactaatgtatcatcatcatgccaattcattttgtgatgtcactaatctgtccactgcaagatgtgtgaatcgcccaaacctagttacagggatgtccttgtcctattgtcggtactctggcatagaactatgttgtcatcaccgcttcccattgtcagccatttctaactccactttgcctgaataatttagtcttttagaccgtcttgtctctgttccatgatcacaagggtgactgattttccaccgtcacaccactgtttgctggcagactgctgtcattttccttgctgtaatctgtgaacccattgtgttaggacatccttgagatttgaaaagctgtgtatcgggaggttgtactatcatgtcctggactgctgaacaagaaaaaaagaagataaaacgcaaattttctaaacttttagtcaagacaatgtcatatgtaggtcttgaccttcatataattgtcaattttacaaagcatttttaaaaagtttaaacttaattgttctgataccatgatccttttgtcatctttccagttcttcttttacattggattgaattattatcttattagtcaaccattagtgtgatatattattatttggaccatgtctaccctgtaacttctgtagatggtcaaaggagttatgttcccttagtttgactttagtagagtgtaaggcaatgaagagaccttatgtattagagaaaggatagctataagcaagctatgcttttgtggaagagagagaaagaaaaagtgggaagtggtggctctcatgcaagagctagctatatacatgcttcaagaaatatgcattaaattcataataaaagaaagagagaggaggaaaaaaatacagctaatatagctaacctattatacatgttgactctacaatgagggtgtgtttggataatgggaaatgaggggtgggattgggattgggaaatgaatgaagggttaggattaaatggatgagggagaatgaagggttaggatttaaagaggggtgtgaaatcatttcccttagacatttgccaaacactgcctgaacttatagctagttgtgagctctactattgaacttgctcttaccagcatccactttcagtgattagtaaatgcatttttgagtggtcataaggataagcttgtttagctgcattggaaccttaaatcattagaacataatattgtattttaatatatttttccttattttcttttgttctgaatcaggcaagtcttcctgattctgtttggtttattttgttttaaagtttaaatagcgatagaattatctcactcttatccatactttgtttctcaactacagaaccttggatgatcaacagatggtgaagagttgcattggcagccgcatcagtgaggttgaggtatcccatggcagtcaattatattaccaactccaacctgaatgttaacggtgattagcaaccatctttctgtccttgcagtgagccagtgacagttcaacaatctgatcaatttctccctagaaaaattatgatgaagcaacagatgattgacaatagtgccaaaatcgtatccccagatactgtgaccacatcaacacgctattgtcacaagtttgcagagttcatgaaaacaaggccacccacttttgcaggatcagccacatcttggtatactgaccaatggcttggcaccattgaaaacaaattagatatggtgcaatgcgatgagaagaacaaagtattctatgctgctcatcagttacaaggagctgcattggaatgttggaaaggttattgtgcaaccgataaagacccacaagccatcagttgggctgagttttcttctattttgcactatatggatgtttctccagggtttattaaaacaaaggaccacacaaaggatggtgtttgcacactctgcagccaaggctatcgctatgagctgatgtggtgcccacggaacaagccaagaaactgtgcatgtgctcgttgtggggagattggacacagcgccagcgagcacgaaatcagctgctctagctgtgaacaaagccatctactcggagagtgccccatgagcaagctcacttgttacctttgtgaaggtgatgatcatgtcccaattaaatgccccttgagttcaatactcactactgtgactcaacatcaacgagaagcttaccaagaagttatacaacaggtaataggagaaacaaataagataatagtaactccagttaagaagttcagagaagtagatgatagtagccttcaataccaatgtaaaaggggcagtgaatcagcatccaaagttgcatgctctgcttgtggtgagcaaggtgaagcagcctcctataaagccaagtgtatgtcaaagacacgaaaggcttcatcgaaaacgaaaaatgtcgtatgtttcagctgcaatgagatgggccattttgctaatcgatgtccacttagacatcagacacctgctcaagacaaaaccattccaaaagctattctgaccaagagaacaacaccaacaacaggtggtgaaggtaaaaaacgacgcaaattatagtcaaagggatgacgtttgcaagccaatatttatcatgaatatcactaacactagtaaaaatataaaactctagccatttgaaaatatatgcagttactttgttcctatttttaatataagcactcccgtgccaagagaataggttgcaaattgtgatc</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0257766, RefSeq:Os09g0257766