Os03g0273800

From RiceWiki
Revision as of 19:32, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os03g0273800

Description

Pyrimidine 5-nucleotidase family protein

Version

NM_001056235.1 GI:115452198 GeneID:4332401

Length

2176 bp

Definition

Oryza sativa Japonica Group Os03g0273800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:9253205..9255380

Sequence Coding Region

9253560..9253620,9253747..9253812,9253906..9254003,9254112..9254149,9254236..9254323
,9254411..9254686,9254789..9255013

Expression

GEO Profiles:Os03g0273800

Genome Context

<gbrowseImage1> name=NC_008396:9253205..9255380 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:9253205..9255380 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagttcgaagaccgctgccacaaggtccaggagcccaaattcgactgcctgctgtttgacctcgatgacactctgtacccactgagctcggggatcgcgtcccatgtcaagaagaacattggagattacatggttgagaagctgggtattgaggagagcaagattgagaaccttggcaatctgctgtacaagaactacggcacgacgatggccggactcagggcaataggctacagcttcgattacgatgagtaccacagttttgtccatggaagactgccctacgagaacatcaagccggaccctgtcctgaagcacattctcaagaacctgcgcatccgcaaactcatattcaccaacggcgacaaggaccacgccgtgagagccctcaagaggctggggctggaggactgcttcgaggggatcatctgcttcgagaccctcaacccgccgtgcccgtcgccgccgtgcgacggggaggccagcatcttcgacatcgccggacacttctccatgcccggcgccgccgccgacgagcttcccaggacacccgtcctctgcaagcccaacgtcgacgccatggaggaggccctcaggatcgccaacgtgaaccctcacaaggcgattttcttcgacgacagcgtgaggaacatccaggcggggaagaggatcgggctccacacggtgctggtgggcacgccgcagcgggtgaagggcgcggaccacgcgctggagagcatccacaacatcagggaggcgctgccggagctgtgggaggaggccgagaaggcggaggacgtgctcatctactccgaccgcgtcgccatcgagacatcggtgaccgcgtag</cdnaseq>

Protein Sequence

<aaseq>MEFEDRCHKVQEPKFDCLLFDLDDTLYPLSSGIASHVKKNIGDY MVEKLGIEESKIENLGNLLYKNYGTTMAGLRAIGYSFDYDEYHSFVHGRLPYENIKPD PVLKHILKNLRIRKLIFTNGDKDHAVRALKRLGLEDCFEGIICFETLNPPCPSPPCDG EASIFDIAGHFSMPGAAADELPRTPVLCKPNVDAMEEALRIANVNPHKAIFFDDSVRN IQAGKRIGLHTVLVGTPQRVKGADHALESIHNIREALPELWEEAEKAEDVLIYSDRVA IETSVTA</aaseq>

Gene Sequence

<dnaseqindica>356..416#543..608#702..799#908..945#1032..1119#1207..1482#1585..1809#cccccctccgcctcgcactctctctcgctatagcctatagcgtctctcccgaaggctcgagacaccacacctctcttctctttggctcctctcctcgctgcattgcgatcccaagagctgtgagctttaggaggtacgctcgtgttcttggctgtggattaattcatggcaaatgtggctcggtttaagagcttttgatgaacgtcgtgtgaggaatgagaggggaaatgatgccgtttataatacattaaaaatgatgataaaattgatatgaaactgcacggagaagtaatcgaaggacctgctgattttttcttgattctttctgcagcttgttcatcacgacctgaaaatcatggagttcgaagaccgctgccacaaggtccaggagcccaaattcgactgcctgctgtttggtaagctacccagttcttgcagaatgtcactctctgttgatttgtacattcgctttctttccctgttttttctttcactgaatgcgaaaaggtcttgatcctgttcttccctggggaactctgcagacctcgatgacactctgtacccactgagctcggggatcgcgtcccatgtcaagaagaacattggaggtacgattaactgaaacgcagactgatttattattagtttagttagtgagatttgtagctgaatgcgtgattcttgtccgccattccgttcagattacatggttgagaagctgggtattgaggagagcaagattgagaaccttggcaatctgctgtacaagaactacggcacgacgatggccggactcagggtaaattaatcagctcccctgatcccttacactgttctgttttttattctataattactcggttactgaaatttttttcttcttttttcctttgctttgatcgatcaggcaataggctacagcttcgattacgatgagtaccacaggtacagacacgaacgcattaagcccattcatctcatggcaatcctctgtaatgatctgcttaacatcttctgttcatttctgacagttttgtccatggaagactgccctacgagaacatcaagccggaccctgtcctgaagcacattctcaagaacctgcgcatccgcaaactcgtgagttcctccagaccagaatcgaaaccaatctcacatgtctcatgtaatcgtgttttggttctgaactggcacgcgtcgttgcagatattcaccaacggcgacaaggaccacgccgtgagagccctcaagaggctggggctggaggactgcttcgaggggatcatctgcttcgagaccctcaacccgccgtgcccgtcgccgccgtgcgacggggaggccagcatcttcgacatcgccggacacttctccatgcccggcgccgccgccgacgagcttcccaggacacccgtcctctgcaagcccaacgtcgacgccatggaggaggccctcaggatcgccaacgtgaaccctcacaaggcggtgcgtcactcacgtcactcctgacgccaaaaggatcgttcttttttattcctcccttcgctcgatcgattgaccttcgtttttttttctcaatttcttcagattttcttcgacgacagcgtgaggaacatccaggcggggaagaggatcgggctccacacggtgctggtgggcacgccgcagcgggtgaagggcgcggaccacgcgctggagagcatccacaacatcagggaggcgctgccggagctgtgggaggaggccgagaaggcggaggacgtgctcatctactccgaccgcgtcgccatcgagacatcggtgaccgcgtaggccacacctactgtctctcccgactccggcgaatcgctcagaacgagcaaccatccatccatccatgtccatccctggccgggcaggtgatcatcaggtgggaattcagaattggccgggacaacaatacgttccaagaaaaaaagaggagggtgttccgtggaagttcaggattcagaatgtaacagcaatgttggaacgggtcctgtagtatatatatgtatcggtcagatctttgcatgtaaattagtactcctagaagcaataataataataattaataaagagaatgggggttatttatcacttcttgattgtgtatttatctctcgtgtttaactgaagctctgaaggatttttattagcc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0273800, RefSeq:Os03g0273800