Os03g0287800

From RiceWiki
Revision as of 19:33, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os03g0287800

Description

Glycosyl transferase, family 43 protein

Version

NM_001056315.2 GI:297600754 GeneID:4332485

Length

4224 bp

Definition

Oryza sativa Japonica Group Os03g0287800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:9997241..10001464

Sequence Coding Region

9997241..9997893,9999776..10000049,10001059..10001142,10001456..10001464

Expression

GEO Profiles:Os03g0287800

Genome Context

<gbrowseImage1> name=NC_008396:9997241..10001464 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:9997241..10001464 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggttcgtccacggaccacggcggcgccggcgggaggggcaagaaggggtcggggtcgcagctgtggaagaaggcgctgctgcattccagcctgtgcttcgtcatgggcttcttcacggggttcgcgccgtcgtccgtgtcggactggacgtccgcggccgtgtcggcgggcggggtggggagcagccacgtggtgaggtcgctgcacgccacgggcggggcggccgtcaaccggagccttctggcgcaggccgccgccggcgcggtggacgccgggccgcagccgctgctggtggtggtcacgacgacggagtcgacgccctcggcggccgggcagcgcgcggcggcgctgacgaggatggcgcacacgctgcggctggtgccgccgccgttgctgtgggtggtggtggaggccaacccggacgtggcggccaccgcgcggctgctccgcaccacggggctcatgtaccgccacctgacgtacaaggacaacttcaccgtcgccgacgccgccgcgggcaaggagcgccaccaccagcgcaacgtcgcgctcggacacatcgagcaccaccgcctcgccggcgtcgtcctcttcgccggcctcggtgacacgttcgacctccgcttcttcgaccagctccggcagatcaggacattcggcgcgtggccggtggcaacgatgtcgcagaacgagaggaaggtggtcgtccagggcccagcgtgcagctcctccagcgtcgctggctggttctccatggacctcagcaacgccacctcccccgtcgccgtcggcggcgccggctacggcgccgccgcggcgaggccacgcgagctggacgtccacggcttcgcgttcaacagctcggtgctctgggaccccgagcggtggggccggtacccgacctccgagcccgacaagtcccaggactcggtgaagttcgtacagcaagtggtccttgaagattatagcaaagtgagaggaattccttcagactgttcagaggttatgagggtttag</cdnaseq>

Protein Sequence

<aaseq>MGSSTDHGGAGGRGKKGSGSQLWKKALLHSSLCFVMGFFTGFAP SSVSDWTSAAVSAGGVGSSHVVRSLHATGGAAVNRSLLAQAAAGAVDAGPQPLLVVVT TTESTPSAAGQRAAALTRMAHTLRLVPPPLLWVVVEANPDVAATARLLRTTGLMYRHL TYKDNFTVADAAAGKERHHQRNVALGHIEHHRLAGVVLFAGLGDTFDLRFFDQLRQIR TFGAWPVATMSQNERKVVVQGPACSSSSVAGWFSMDLSNATSPVAVGGAGYGAAAARP RELDVHGFAFNSSVLWDPERWGRYPTSEPDKSQDSVKFVQQVVLEDYSKVRGIPSDCS EVMRV</aaseq>

Gene Sequence

<dnaseqindica>1..653#2536..2809#3819..3902#4216..4224#atgggttcgtccacggaccacggcggcgccggcgggaggggcaagaaggggtcggggtcgcagctgtggaagaaggcgctgctgcattccagcctgtgcttcgtcatgggcttcttcacggggttcgcgccgtcgtccgtgtcggactggacgtccgcggccgtgtcggcgggcggggtggggagcagccacgtggtgaggtcgctgcacgccacgggcggggcggccgtcaaccggagccttctggcgcaggccgccgccggcgcggtggacgccgggccgcagccgctgctggtggtggtcacgacgacggagtcgacgccctcggcggccgggcagcgcgcggcggcgctgacgaggatggcgcacacgctgcggctggtgccgccgccgttgctgtgggtggtggtggaggccaacccggacgtggcggccaccgcgcggctgctccgcaccacggggctcatgtaccgccacctgacgtacaaggacaacttcaccgtcgccgacgccgccgcgggcaaggagcgccaccaccagcgcaacgtcgcgctcggacacatcgagcaccaccgcctcgccggcgtcgtcctcttcgccggcctcggtgacacgttcgacctccgcttcttcgaccagctccggcagatcaggtaaccatccaaaccacccccaaagtaaaaaaacaattctctctctcgcaatctttcgccgagttaaacaatgcaaagttctcttctttaaccatctctcctgatgcaagcaagtagcgcgcacacactaaacgctagccagtaaacaacgttagcgcccaaagcacacaagcgaggctacttgcaagcaactttgtcaggttgccttggcagctacagctcatgcaccacctggtggtcgctgcgccgcgctagtttaaccggcgaggagaatccaagccatgtgacgcgaggaggtcgcgctccccccgcatccgccattccatggtccttttttttttccttcttttatcctccctgccgcgcctgccagatcttagggacgaaaggcaaagcaggcagcctggaccgctgaagcagcagcagttctctgctttggtttcttgcagccgctcattttttccttttggggccatgtttttactgatactagtactagtacaagtttagaactgactgctgctgctgctactatcatgtgtactcagccaatagcattaagttggtgtggcgccgccgtggcggtgtttagcgtagcagatgtccaaatgtgtcggcagaaatgattggcacccctcaactaacggaagaggggaggccgtcgcggctgtcctttctccaggaccccgaggcgatagcacaatgcgtggtcggtcgctggctgatgctgcataagccgtccctgcagattgggctcgcgtgttcgtactactgtcaacttgaatcacgagttcagcagcagcagcagcgagcgtgcgtgcgtcgatctctgcaagttgcgggccgttgcatgagccgcagggcgaatctgcgtatggttttctttgttcggtttgctgggagggaaaagggaaggcggtctcagtacgtgcacggggctcttgctgctgcatcctgcagggatgtgtggctggctggcgcataatacatcgccagtgattttcagcggatcgtgttaggttcgttttggtacgtgatagggcagtttcatcaaccaatgcggcgctctggattgtgttaggttcatttggctcgtgacagggtagtctcatcaaccacttcggtgttcttgaagattgttcagttagtggtacccttttcaagatgaggtttaggtaattaggtaaaaaaaatctgaatcttaatcagaaaagaacaaacccttaaatttcagcattcctaacgctacagaaattctgaattgagcgtatttaacttagctttggcccctccgtttatgttttttccttttcctatccgtgccacatagtactacttaattaggtgctatcatgctaaccagttagtgcccttcgccgtttcttcaaaatgcagctcgatcgaaaactaactcatgacagttgaacaatcgagtaatcgatttcgcgacattctagtccgcaggggcctgcgttatcgtaacggcaacgtgacatcgacagttgaggacgctcgagtttacgacattttagctgcatgctgcatggcccgcatccataagagcaaggataataatagagccgacttcatgctattagccaatcttaaagccaacacatataatagattagttataaggttggctacaattttcttctcctctctctatctctcacttatacattaattgtatttgtctaggagcttatgttaagctagctcttgcatgagagccaacacccttaactttttgtcacatctctcctccatataagtttatagtaggcttatagctcactattatacttgctctaatgttattctactgtagtactaggagtaataccgtttcctaaccccgagaattatgttttttccacaggacattcggcgcgtggccggtggcaacgatgtcgcagaacgagaggaaggtggtcgtccagggcccagcgtgcagctcctccagcgtcgctggctggttctccatggacctcagcaacgccacctcccccgtcgccgtcggcggcgccggctacggcgccgccgcggcgaggccacgcgagctggacgtccacggcttcgcgttcaacagctcggtgctctgggaccccgagcggtggggccggtacccgacctccgagcccgacaagtcccaggtcagttccaccccgtcacctttcacgcgtaccaaacttattagagagccccaaatcacgcaagttttacgtgttactaccgctcgggtgatcgatcgatcggtcggcgtcgcccacgaccagaagcggcaagaattcacctcgcctttcgcgcggccagaggcaggaaagaaatgctgttcgctagcgatgtcgcggtgttttttttttttttggggggggggggggttcaagattgaatgaggcatttccgccacgaaagtggcgtttcgccgtgtcggtttgcgcgttcggcgtcgcgcgtctctgctcgggcatgtggtacaggtaggggacgggaaattggccgtgtcttttggcccatctgtccctaactaacttttttttctccccggtcaaatccttgtcacctgtcaagtctcaacctgatttttctgcattaaaaagatcacactctagctaaatggctgaatggcaatggcgctaggtgatcatttctccaacagagagagagagagagagagagagagagagattgtttattctgcagcaatcgacaaaaaaacggatcgaatcttgagcggcatttttgcaaatgcgtaatcgtgggtttagtctgatctggtgctaatttggtgggagagggtaaggaagaggggggggggggtcccgtggctgagtaggatagtgtacggctttgatgaagtccagtgcaaggcaagccccagcgggtggttagcagtagtagagcagtacagtggcccttgtttttaatgagaaaacacaccttcttttaggtgtacaatcgattgttcatcttattacttgaacctaaccactaaagcaagcacctctttcgttatgagatcaatcatgcaaggttgttagagcttctttctctgcattgctcattgcttcctctgatgccaaaatgtctacccatttttcttgattgtgctgcatgatgaaccgttgccctaacatgtttttggtgccattgttttatcaggactcggtgaagttcgtacagcaagtggtccttgaagattatagcaaagtgagaggaattccttcagactgttcagaggttatggtatggcatgtcaacacgacgccgctaccttcttcgcaaccgtctcctcagaacaagaggtgatagaacgatgagctgtagaagagactggacgagccggaggagaggagggtgtacattgtacatgcatggttacaacttgaagctgctgatttcctactagctgcaaagaaggaaaaaattttggttttctttccaagggattgattaatctcccatgggcgatatcatcataatgtacattttttttactattctttgaaaattgtgatatatgtataatctcttctctgttttttttttttgcttcaagagggtttag</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0287800, RefSeq:Os03g0287800