Os03g0293500

From RiceWiki
Revision as of 19:33, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os03g0293500

Description

Similar to Pyruvate decarboxylase isozyme 3 (EC 4.1.1.1) (PDC) (Fragment)

Version

NM_001056346.1 GI:115452420 GeneID:4332519

Length

2929 bp

Definition

Oryza sativa Japonica Group Os03g0293500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:10268473..10271401

Sequence Coding Region

10268653..10268820,10268930..10269118,10269210..10269327,10269418..10270068,10270447..10270610
,10270714..10271241

Expression

GEO Profiles:Os03g0293500

Genome Context

<gbrowseImage1> name=NC_008396:10268473..10271401 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:10268473..10271401 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagacccatatcggatccgtggacggggcggcggcggcggcggacaacggcgcggtggggtgcccggcgtcggcggtggggtgcccgatgacctcggcgcgccccgcgcccgtgtcggccggcgaggcgtcgctgggacggcacctggcgaggcggctggtgcaggtgggcgtcagcgacgtgttcgccgtgcccggggacttcaacctcacgctgctcgaccacctgatcgccgagcccgggctgcgcctcgtcggctgctgtaacgagctcaacgccgggtacgcggccgacggctacgcccgcgcgcgcggcgtcggcgcctgcgccgtcacgttcaccgtcggcggactcagcgtgctcaacgccatcgccggcgcgtacagcgagaacctgccggtcatctgcatcgccggagggccgaactccaacgactacggcaccaaccgcatcctccaccacaccatcggcctcccggacttctcccaggagctccgctgcttccagaccgtcacttgccaccaggcggtggtgaccaatctggaggatgcgcacgagcagatcgacaccgccatcgcgacggcgctgcgggagagcaagcctgtgtacctcagcatcagctgcaatctcccagggctgcctcaccccacgtttagccgcgaccccgtccccttcttcctcgcccccaggttgagtaacaagatgggtctggaggctgcggtggaggccactgtcgagttcctgaacaaggcggtgaagccggtgctcgttggcggccccaagctgcgtgtggcaaaggcagggaaggccttcgtcgaccttgttgatgccagtggctacgcctacgcggtgatgccgtcggccaaggggctcgtgccagagacgcacccccacttcatcggcacctactggggtgccgtcagcacggccttctgtgccgagatcgtcgagtcggccgacgcctacctcttcgcagggccaatcttcaatgactacagctctgtcggctactccttcctcctcaagaaggacaaggccataattgtgcaaccggagcgtgtcatcgtcgggaatggcccggcgtttgggtgcgtcatgatgaaggagttcttatctgagctggctaagcgcgtcaacaagaacaccactgcttatgagaactacaagaggatcttcgtgcctgagggccagccgctggagagcgagccgaatgagccgctgcgcgttaatgtgctcttcaagcacgtccagaagatgctgaacagtgacagtgctgtgattgccgagactggtgactcctggttcaattgccagaagctgaagctccctgagggctgcgggtatgaattccaaatgcagtatggttccattggatggtcagtgggtgcattgctcggatatgctcagggcgctaaggacaagcgtgtgattgcctgtattggtgatgggagtttccaggtgacggcacaggatgtgtcaacaatgattcgctgtgcacagaacagcataatcttcctgatcaacaacggcgggtacaccattgaggtggagatccatgacggtccatacaacgtcatcaagaactggaactacactggccttgtggatgccatccacaatggagagggcaaatgctggacttctaaggtgaagtgcgaggaggagctgacggaggcgatcgggatggcgctgggggagaaggactgcctgtgcttcattgaggtgatcgcgcacaaggacgacaccagcaaagagctgctggaatggggatcgagggtttctgctgccaactccaggccaccaaatcctcagtag</cdnaseq>

Protein Sequence

<aaseq>METHIGSVDGAAAAADNGAVGCPASAVGCPMTSARPAPVSAGEA SLGRHLARRLVQVGVSDVFAVPGDFNLTLLDHLIAEPGLRLVGCCNELNAGYAADGYA RARGVGACAVTFTVGGLSVLNAIAGAYSENLPVICIAGGPNSNDYGTNRILHHTIGLP DFSQELRCFQTVTCHQAVVTNLEDAHEQIDTAIATALRESKPVYLSISCNLPGLPHPT FSRDPVPFFLAPRLSNKMGLEAAVEATVEFLNKAVKPVLVGGPKLRVAKAGKAFVDLV DASGYAYAVMPSAKGLVPETHPHFIGTYWGAVSTAFCAEIVESADAYLFAGPIFNDYS SVGYSFLLKKDKAIIVQPERVIVGNGPAFGCVMMKEFLSELAKRVNKNTTAYENYKRI FVPEGQPLESEPNEPLRVNVLFKHVQKMLNSDSAVIAETGDSWFNCQKLKLPEGCGYE FQMQYGSIGWSVGALLGYAQGAKDKRVIACIGDGSFQVTAQDVSTMIRCAQNSIIFLI NNGGYTIEVEIHDGPYNVIKNWNYTGLVDAIHNGEGKCWTSKVKCEEELTEAIGMALG EKDCLCFIEVIAHKDDTSKELLEWGSRVSAANSRPPNPQ</aaseq>

Gene Sequence

<dnaseqindica>2582..2749#2284..2472#2075..2192#1334..1984#792..955#161..688#atccaccgaaccatacccaacaagcgtcaaatcgcgtcaaagccaaaaacctcatacaagtccaggaatctgtaatatattccgagacttttacacgcattccagtcatcactagtgtagcggttgctgcttcttccccggggaggtttatcggatcttgatggagacccatatcggatccgtggacggggcggcggcggcggcggacaacggcgcggtggggtgcccggcgtcggcggtggggtgcccgatgacctcggcgcgccccgcgcccgtgtcggccggcgaggcgtcgctgggacggcacctggcgaggcggctggtgcaggtgggcgtcagcgacgtgttcgccgtgcccggggacttcaacctcacgctgctcgaccacctgatcgccgagcccgggctgcgcctcgtcggctgctgtaacgagctcaacgccgggtacgcggccgacggctacgcccgcgcgcgcggcgtcggcgcctgcgccgtcacgttcaccgtcggcggactcagcgtgctcaacgccatcgccggcgcgtacagcgagaacctgccggtcatctgcatcgccggagggccgaactccaacgactacggcaccaaccgcatcctccaccacaccatcggcctcccggacttctcccaggagctccgctgcttccagaccgtcacttgccaccaggtacgtgtcccccccctctgctcctcctcggatttccccctaatttcttgggttgcagatttggttggatcgatcgatggtttgctaatgtttgtggattcaggcggtggtgaccaatctggaggatgcgcacgagcagatcgacaccgccatcgcgacggcgctgcgggagagcaagcctgtgtacctcagcatcagctgcaatctcccagggctgcctcaccccacgtttagccgcgaccccgtccccttcttcctcgcccccaggtacccctctccgttttatcatgaagcttatccctataatctaccaattttgtcatgccatgtctcgattcaagagcgtaggattttatttaccccaaaaaggacgcctggttgaattataagtattgagatcgtgcatatttgatacagtaccggaagttgtctgatgatttcaatatgttgtaatatttcacttcagttcgatgctataagattggttgtaccaatgcatttcagatttttgattcgatgctatgaaattggttgtaccattgcatttcagattttcagtttgtctgatgaaattgtggctatgagtttggttgtaccattgcatttcagattttcagttcgtctgatgaaattgtggcattgcaggttgagtaacaagatgggtctggaggctgcggtggaggccactgtcgagttcctgaacaaggcggtgaagccggtgctcgttggcggccccaagctgcgtgtggcaaaggcagggaaggccttcgtcgaccttgttgatgccagtggctacgcctacgcggtgatgccgtcggccaaggggctcgtgccagagacgcacccccacttcatcggcacctactggggtgccgtcagcacggccttctgtgccgagatcgtcgagtcggccgacgcctacctcttcgcagggccaatcttcaatgactacagctctgtcggctactccttcctcctcaagaaggacaaggccataattgtgcaaccggagcgtgtcatcgtcgggaatggcccggcgtttgggtgcgtcatgatgaaggagttcttatctgagctggctaagcgcgtcaacaagaacaccactgcttatgagaactacaagaggatcttcgtgcctgagggccagccgctggagagcgagccgaatgagccgctgcgcgttaatgtgctcttcaagcacgtccagaagatgctgaacagtgacagtgctgtgattgccgagactggtgactcctggttcaattgccagaagctgaagctccctgagggctgcgggtgagcattctgaaacttgctacaaccctgttgtgaatggttttacaatgttcttggtgaatatactgagtggtttattgcatgctgcaggtatgaattccaaatgcagtatggttccattggatggtcagtgggtgcattgctcggatatgctcagggcgctaaggacaagcgtgtgattgcctgtattggtgatgggagtttccaggtgaagcaccgtgatcacttgatcttttgatcagatatgttgctaatatgatggcatgttactgatgtgtgatcgtggtaatttcctgcaggtgacggcacaggatgtgtcaacaatgattcgctgtgcacagaacagcataatcttcctgatcaacaacggcgggtacaccattgaggtggagatccatgacggtccatacaacgtcatcaagaactggaactacactggccttgtggatgccatccacaatggagagggcaaatgctggacttctaaggtatgctaactcttcgatcacctgacattcaccacacgaggcttagaccgcagatgctcctatatctgaggaactgttgctgatggttgccatgatgtacattgcgcaggtgaagtgcgaggaggagctgacggaggcgatcgggatggcgctgggggagaaggactgcctgtgcttcattgaggtgatcgcgcacaaggacgacaccagcaaagagctgctggaatggggatcgagggtttctgctgccaactccaggccaccaaatcctcagtagaaacttttagtacttgttgcaagctgggctcaatcataataatgtaaacactttgcccttcagttatgttccttgtgtccattccctcgggtttctgttcttccagtttcggtagctctgtatctacttgtgaacatctgtttctccaatcaaatgctacgagggttatgagaggttttc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0293500, RefSeq:Os03g0293500