Os09g0258700

From RiceWiki
Revision as of 20:56, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os09g0258700

Description

MtN3 and saliva related transmembrane protein family protein

Version

NM_001069237.1 GI:115478213 GeneID:4346541

Length

6400 bp

Definition

Oryza sativa Japonica Group Os09g0258700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:4966924..4973323

Sequence Coding Region

4966924..4967436,4969519..4969600,4970399..4970647,4971494..4971546,4972964..4973059
,4973189..4973323

Expression

GEO Profiles:Os09g0258700

Genome Context

<gbrowseImage1> name=NC_008402:4966924..4973323 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:4966924..4973323 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggtgtccccagacttgatccgcaacatggtgggcatagtcggtaacatcatctcctttggcctcttcctctcgccggtgcccaccttctaccggatcatcaagaataaggacgtgcaggacttcaaggcggacccgtacctggccacgctgctcaactgcatgctctgggttttctatggtctccctatcgtccaccccaacagcattcttgtcgtcaccatcaacggcattggccttgtcatcgaggctgtctaccttaccatcttcttcctcttctccgacaagaagaacaaaaagaagatgggagtggtgctcgctacagaggctctcttcatggcggcggtggtgctcggcgtgcttttgggcgcgcacacccatcagagacgctccttgatcgtcggcatcctctgcgtcatctttggcaccatcatgtactcctcaccactcaccatcatgagtcaggttgtgaagactaagagcgtggagtacatgccattgctgttgtcggtggaggcggagtcctacgagcggaaggtgccggagattcttccaagacaggcagtggaggggaaggggaggggggcggcgagagtcctgctcaactgtgacatactcctgctcaactgtgacatactaagccacttttgcttccattccatcagtgatcaatctgagataagcctccctgaaaatgaactccaggctctgctcctatcaattatgtttaatctttttgagattaccagtagatcactgagagaggagagtaatcacaattcgcaaaagcatcggtctgtgtcattagcaactcagcaaatgacagtggcaaacgcaaacgaggtacaaagtctaacatcaacaacaccagcactagcaaaggagcaccccctacaggtgcagcccaccaagaattttgaaagcaactctacagagtttgttattgatatagaggggccatatgatgctgaagacataacaggtcacacaacggataagacgaagttcattcttgtgaattattcaaactcttcagaagaacataagagccaagatcctacacaagatgaatcagacaacattccaaacaagagcacaaatgtatcaaacatatatcatgcattttaa</cdnaseq>

Protein Sequence

<aaseq>MVSPDLIRNMVGIVGNIISFGLFLSPVPTFYRIIKNKDVQDFKA DPYLATLLNCMLWVFYGLPIVHPNSILVVTINGIGLVIEAVYLTIFFLFSDKKNKKKM GVVLATEALFMAAVVLGVLLGAHTHQRRSLIVGILCVIFGTIMYSSPLTIMSQVVKTK SVEYMPLLLSVEAESYERKVPEILPRQAVEGKGRGAARVLLNCDILLLNCDILSHFCF HSISDQSEISLPENELQALLLSIMFNLFEITSRSLREESNHNSQKHRSVSLATQQMTV ANANEVQSLTSTTPALAKEHPLQVQPTKNFESNSTEFVIDIEGPYDAEDITGHTTDKT KFILVNYSNSSEEHKSQDPTQDESDNIPNKSTNVSNIYHAF</aaseq>

Gene Sequence

<dnaseqindica>1..513#2596..2677#3476..3724#4571..4623#6041..6136#6266..6400#atggtgtccccagacttgatccgcaacatggtgggcatagtcggtaacatcatctcctttggcctcttcctctcgccggtgcccaccttctaccggatcatcaagaataaggacgtgcaggacttcaaggcggacccgtacctggccacgctgctcaactgcatgctctgggttttctatggtctccctatcgtccaccccaacagcattcttgtcgtcaccatcaacggcattggccttgtcatcgaggctgtctaccttaccatcttcttcctcttctccgacaagaagaacaaaaagaagatgggagtggtgctcgctacagaggctctcttcatggcggcggtggtgctcggcgtgcttttgggcgcgcacacccatcagagacgctccttgatcgtcggcatcctctgcgtcatctttggcaccatcatgtactcctcaccactcaccatcatgagtcaggttgtgaagactaagagcgtggagtacatgccattgctgttgtcggtggtgagcttcctcaacggcctctgctggaccatcatacgcgctcatccgcttagacatcttcatcaccatacccaatggtcttggcgtgctctttgctctcatgcaactcatcctctatgccatctactaccgaaccatacccaagaagcaggataagaacctcgagctaccaaccgtcgcccctgtcgctaaggacaccagcatcgtcacccctgtcagcaaggacgacgacgtcgatggcggcaatgccagccatgtcaccatcaatatcacaattgagctataagctagcttagtgatcgaacataactgagtgtctaacactctaagctagttaggtgttaccaacttctacattcaagtaatagtactgtttagtaaccaatgtaatttctgtttcttttatctcattgtgaagttgcaattatatacatcactagaaaaaatacccgtgcgttacaacgggtaatgttattttaatcttattattgttatacagtttagctaggataaaattcattgcgggagtttacttgtatatatttttttagaaaatcatgagctgcaattaggagcccgacttccatctcaagttagcatgcaagtttttttaaagaaatttcttgtacgacttcttctgtattttcaaaagcagatgaacttaaaatccaactcatacacggatctgtatttccaaaagcgaacaaacttaaaaaccgactcaagtacagatgacgtgccaaaatactggcaaaaatatattcaattttttataataatagatatttcaattgggtgtagtgtaacaattgacggcataatatgggatgacacgagatgatcagagttggatagcagacgaaaatttcacctgacgtcttatgaattttttaattagatatagatagatggatacttaatgtaaatttgatacatgaaatttagctccgaggaagtggaaaatatagatttgggagtaatgaccgaaatatttcttctttaatttaatttgggatgtgtgactcatttgcataagagcaagtttaatagtatagctcactactatctccaattttatttatagccaatgtaatagctaattcatacaatagttgcttactatactattaatatatggtcccacctgtcatacacacacggtgttttggagtccgcgctgcagctggctacagatctgtagcctgctgctcttctgtctcatcttttattttattaaaatatatttatagctggctaatagtctgctattgtacctgctctaactctagttccatactaatggctataactttaatgcatgctgcatgcatgcatacatgaaactcccatctgacaaatcaattcttggcagtcagcagcaatgcggcatgatcagagacgcaatgctattccatcgcatgcaagagggggttttaactatttgtcacttttagatttggcaaataactatttgccacccctatctcaatgacatgtgggtccacatgtatctatgacatatgggtccagtggcaaaaagttaattgccacatctaaatgtggcaaatggttaaatattctcatgcaggacgatgcaaacattatcgatcggtaatcatctggaaaggcgcggtccgcggagccatgcgacacacgaggcgtggacagaacagagcgtactaaaaaacgtgagacatatgagacgcagaatccgccttcgatctccatggcgcgtccggattctacgtggcacggacaagtcaagcccaagccgaaaagaaatcgaagacaaattttgacgacgtacgaaaattcttgacaaaagcatcttaaatttttataacgcatttgctattttgtagtcgcctgcaaaattttaatcgattagtcaacttttgtgcacgctatcgggctagtggaaaggctcttttttatatgggtcgtgcttttccatcaccttttccttgctaataaacccagagcccgcagcccacagcctacaaatagctctggaaaaatccaccacacccgtgactctctagagagctcttctgcttctcgacatttctgtttctcgagcaggaggcggagtcctacgagcggaaggtgccggagattcttccaagacaggcagtggaggggaaggggaggggggcggcgagaggtgggctgcgcactgcgagcggccgcggacggcgccgaagaagagaggcgggggagaggagttgatgcactgcaggtttttcatttctcttttttgttcaaatcctcacgccgtggcggcctgatttcctttggtccagatttctatcctgtggattgtgagctattagggctggattagctaccatttcaggggggggggatcccgtggagtttgtttcattgcttgagttttgagttgattttgcccaatgtcgagtaaagcatcctggatctgaaaccacatggtgtgtgtgctttgatgttttgttcgatgtagtttgggaaatttttttaggggtttgctgcacatcgtgtatgatatagtcggcgggaggtgggccgtgcctctgcctggttctaaaccttggcactaattattttctctctaacttcatttgttagggagtttttcagtttcactagttggaactgatatatcatggaatgaacgcacatggttttgctctagatttagtcgttaatcctgtaggccagtgatgacctctgtgctgtggcattttagaaaggggtttagggatttggtagcaattcgagctcaagaactaaccaatatttcattaaatcccagcaaatgctcttacatttgtccctcagtattgtcagattatacagggagttaatcagaggttactatatacagggacagtgtcactgtatacagggaggagttgtgttttctgcttgtagacaaaagctatcttttgttttgtgtgctgtgtattttttttaacggtagtcctgctcaactgtgacatactcctgctcaactgtgacatactaagccacttttgcttccattccatcagtgatcaatctgagataagcctccctgaaaatgaactccaggctctgctcctatcaattatgtttaatctttttgagattaccagtagatcactgagagaggagagtaatcacaattcgcaaaagcatcggtctgtgtcattagcaactcagcaaatgacagtggcaaacgcaaacgagggtgagattaatggaaacagtaggattaatctgaaactaaaatacagagaataaatggacaatataatttgcgatagtactgtataaatggacagtataaagcatatctcttcatatgctacgtacagttatgttgtatcaatgattcacttatttactgctttaaatatggcctcaaactaaaacctatgctttcgatcagcacatgcccttaaattttcattatttctttttctgaaaattatgtatctacgctagttgcactctctgactattgtagtagccattttgaattttcgtgcaagtcgtgtaataattttgtgcaactaatgtttttttaaccaaatttccatttactttgataaatagcgtttgttgtttgggaaaacatgcatacaagtgaggacttttggtagacaacttgttttcttagtaatttcattgccttttctttttctttttattatgatgggaaggagattcaatttttgttttgcgggactcgggatcaacaccacaacaaatcggtggttcttttggatgttaggcgagctcaggtttttctggtgaaaaacctgatctggtgaaaaacctgagcaaactgcggatgctaatacagtagtagtataatcaacagtgactctctttgcaattttttggctgtaacttggggagtagtctaaggatggattggatatagaaggattggcagtggtttgacagtgggatggtagagcttgtggctggaagttagttcccttgttattagttacctttttcttcatttttcataaatccctttggcagtactgatttctttttttataatttgcacaccctttggcagtacaaagtctaacatcaacaacaccagcactagcaaaggagcaccccctacaggtatatgttattattctgttagtttgtaaattttcgttttagacaaatagcacacaaacacaacagatcaaataattgtgccaatgctaagcaaaatttccctaccaccaacaccaatctatccagtccaaaaaaaatgttcattctggactatagcattttttttacttggcatgtatactttctttaaaatctggaacaggactaagcatagcctagttctgcgtcagtactcaatgttaccagaaccataagttactaggcccaaatatctgttttgtatttcacaaatatagaagatatattaggatgttcatacagagccctattagtctattgctcaattaaatttttcaaagcgaacaactatctgttgttcattcaattttttcacataaatcttgttttttttgtcccagtaggctacccatggatcacactgattagttttattttttatcactaattttttaagctataatatgctccaagatttagctatgccacagtccatagctttgcaagctgaaattttttcaatctgaaaatataatctcgctgcacaccatctactccatttttttaatgttgtctcactggtagctgtttctttgatatctgttttgacagcaatacttttttttttgaaataaactttttttcagagaatgttacatgttcccaactatataccataccaccatcaaaaccaactgaacaagaaaactcaaagtcaaacagcaacaaggacaacgcttgcaaagaaacgcagcatgcaggtttttttgttcaatttgtactatagcattatcttgttttgttcatttttttatgtaacaaaagtgtcatgctcccataaacatttatttcgtttgtttagtatgcttaagcaatgtcttgtttagcataatttcactctaaaacaatccttttctagataaaaaagcatccagtaaggactttgtttgtagtcagcaatcaaacaactctgtggcatccaggactagagctaagagattacattcagcatcccctttgtcggttgtatcaattagcccatcgaaaaaaattcttctgaccaaaagattcgcaaagcagtaaggaaacaggtaaaaacactattactttttttatgtcatatcattatatacaatacattattcatggattaaaaaattacaaaaaagtttgcataatataagttcatttttttcagtccttgaaagcaacataacttatcagtactcaaccagacagggaagaatcaaacaaggatggtcttttcgtggaacctatatgtactatactagccaaaaaggaggaggtaaagttcaaaattaggcaagagtcaaaatttcaaaccattatatttttccccctggcttttcactacatgtcatttttttttgtaaaaaaggtgcagcccaccaagaattttgaaagcaactctacagagtttgttattgatatagaggggccatatgatgctgaagacataacaggtcacacaacggtaatagaaaaagattttttttgactacataatgtacttttttaaaaaaataattttttgttccatttttgtttcaatgattttaatcgatctatatctttttttattatgcttttttaatatttttaggataagacgaagttcattcttgtgaattattcaaactcttcagaagaacataagagccaagatcctacacaagatgaatcagacaacattccaaacaagagcacaaatgtatcaaacatatatcatgcattttaa</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0258700, RefSeq:Os09g0258700