Os03g0336700
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Contents
Annotated Information
Function
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Expression
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Evolution
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References
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Structured Information
| Gene Name |
Os03g0336700 |
|---|---|
| Description |
PAP/25A core domain containing protein |
| Version |
NM_001056579.1 GI:115452886 GeneID:4332766 |
| Length |
7078 bp |
| Definition |
Oryza sativa Japonica Group Os03g0336700, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 3:12544932..12552009 |
| Sequence Coding Region |
12545049..12545273,12547269..12547454,12547704..12547796,12547987..12548169,12548281..12548383 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008396:12544932..12552009 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008396:12544932..12552009 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atgatggcgggcggtgggggtgggggagggggagggacgctggcggcggcgatggcgagggcggcgccgggggcggcggcgatcccggcgggggcggtggcgcgcgcggaggaggcggcgggcgaggtggtgcggcgggtgcggcccacggaggcatccgagcggcgccgcgcggcggtcgtcgggtacgcgcggaggctcgtcggcaccgcgctcggctgcgaggtctttgcatatggatcagttccattgaagacttaccttcctgatggggacgttgatctgactgtactcggcaatacatcttatggtagtactttaattgatgatatctaccacatccttcagtcagaagagcagaattgtgatgctgaatttgaagtaaaggacttgcaactgatcaatgctgaggtcagacttattaaatgcactattgaaaatattgtcgttgacatctcattcaaccaaactggtggaatctgcgcactttgcttccttgagctggttgaccgtaaagttggaaaaaatcatctagtcaagaatagcattatattaatcaaggcatggtgttattatgaaagtcgtctactaggagctcatcatggactgatatcaacttacgcactggaaactcttattctttacatattcaatctattccacaaatctctccatggccctctggaggttttatataggtttctggagtatttcagcaagtttgactgggacaactattgcataagtttaaatggccctgttgcattatcgtctttgccaaatcaaattgtcgaagcaacaaatacacctggcagtgatttgctgtttgacaaagagttcctcaataactcggtgcaaaaaacagattctaatgcatgcaatactgagttccgttcaaaatatctgaacataattgatccactaaaggaacacaacaatcttggcagaagtgtgaacaaagccagctttaatcgtattcggactgctttttcgtatggtgctcagaagcttggtcaagttctcttgttacaaccagaacttattcctgatgaaatttatggatttttcaagaatacattgaataggattggaagtggagtaaggccagacattggagatgaaagctataatgatgcatttcgttgtgagtccttccttggtcctggcaaggcattgtgggatgagatgtcgagcatgaaaatttcctgcaataatcaagatgagaacagaggtcctcaccatctttcaaagtgcttagttaacaatgactcatatgccaccttgaatgtgcctacacattttcatggagatcacatggtagcatcaagtactgatttgagtctaaaatcgtcctgtttcatccaagagacaccaaatcagtatcctttgttttacctagaagatggcaatggtagcagcgaacagtacttggaccatgaaatggtggaacaggcatcttgttgtacagctgaaacctgccatgcgaatgaagaaccatcaatgcatccacaagtttatccaaacaatacgttacatacattttactcaagtttggccaataatttggaatattccaaatctggtcagtcagacatgacaaattcgagtataaatgttgcccatgaggaaaaacaaaaattttctccctccccattgagcttggtggatctatcaggtgatctagatttgcaattgagatgcctccgccaagttcagtatcacctagaatacatgtttgatggttttttgcagtctgttcaagaagcatcttctgactgtaaggttgcaagggactcgtttgaaattccagctgttaacatcacatcgaattctgatgtggtgctgccaggtctgttatcaccttcatctactgaaactgatgagaggagattatctccagtttcctcttctcatagcaccgaagattcttcacagcagtcacatgatgagagcaactggggtgcgtcttgtcagcagaactttttattaataccctctcaaacaattgctccaaccaatggactgtcaccatgttcttcttatgctaattcagataattctgttcaattgtatgatagctcagatgatatctccaatatgcatgaaacagatcaacatattctccaaaagcacatggtatctttaggacagaacaagacactaatcaatcgacaagtgagagttaaaagcaatcaagcatcagttccaaaaggaaaattttccatttgtaaggagcaaataacacaagacactgcaaccaaggacataaagttaagccggcatttgagagtcaaggacagtgagcatgaatatataagcactgctaagaagatttcgagctataattgtgacacttgcttagaatgtgtcaaacctgaaagtgaagcaatgataccaaggcattacaagcatgcccgctcaagcaagaactcatttgagcatcggatttatgatattgacatggggtttgcccgatctggtagttcacggaatcaaatgccaaaatatcaatcactgaagaatcaggatatgtcaagcttaaatgtccaaaaagagcatgaaattaactggcccagaaaacaaatgccatccgagctgttgaagctccaaaacagtctacgtggcagggcttgctcaaacaagaaattagctgcaaaacaaattaacaataatcacaaagaacatctatcttttgtaagggatccagaacagatgccatataatcaggttaactcaaacaaagagtttgagactgttggcaaatccagccaattattgccacgggtacagctctctcttcataacgacagaagccttacagcatctacttgtcagtcctcattccctgtgacaaaaggatctactcaattcaacgacttggagatgccttcactagaaaatattgagtttggaactttggggtctttttcattgacacttgtgtcaccaaaatcgaataagaatcccaacacacactcaaccagtaagacatgtgccgatgctgctgcattggcattgcaaagccatccaacacaaagcaggtcaccaggattctacaaagttggagatgaagatcacttcccacctctccgtgctgggactcgctga</cdnaseq> |
| Protein Sequence |
<aaseq>MMAGGGGGGGGGTLAAAMARAAPGAAAIPAGAVARAEEAAGEVV RRVRPTEASERRRAAVVGYARRLVGTALGCEVFAYGSVPLKTYLPDGDVDLTVLGNTS YGSTLIDDIYHILQSEEQNCDAEFEVKDLQLINAEVRLIKCTIENIVVDISFNQTGGI CALCFLELVDRKVGKNHLVKNSIILIKAWCYYESRLLGAHHGLISTYALETLILYIFN LFHKSLHGPLEVLYRFLEYFSKFDWDNYCISLNGPVALSSLPNQIVEATNTPGSDLLF DKEFLNNSVQKTDSNACNTEFRSKYLNIIDPLKEHNNLGRSVNKASFNRIRTAFSYGA QKLGQVLLLQPELIPDEIYGFFKNTLNRIGSGVRPDIGDESYNDAFRCESFLGPGKAL WDEMSSMKISCNNQDENRGPHHLSKCLVNNDSYATLNVPTHFHGDHMVASSTDLSLKS SCFIQETPNQYPLFYLEDGNGSSEQYLDHEMVEQASCCTAETCHANEEPSMHPQVYPN NTLHTFYSSLANNLEYSKSGQSDMTNSSINVAHEEKQKFSPSPLSLVDLSGDLDLQLR CLRQVQYHLEYMFDGFLQSVQEASSDCKVARDSFEIPAVNITSNSDVVLPGLLSPSST ETDERRLSPVSSSHSTEDSSQQSHDESNWGASCQQNFLLIPSQTIAPTNGLSPCSSYA NSDNSVQLYDSSDDISNMHETDQHILQKHMVSLGQNKTLINRQVRVKSNQASVPKGKF SICKEQITQDTATKDIKLSRHLRVKDSEHEYISTAKKISSYNCDTCLECVKPESEAMI PRHYKHARSSKNSFEHRIYDIDMGFARSGSSRNQMPKYQSLKNQDMSSLNVQKEHEIN WPRKQMPSELLKLQNSLRGRACSNKKLAAKQINNNHKEHLSFVRDPEQMPYNQVNSNK EFETVGKSSQLLPRVQLSLHNDRSLTASTCQSSFPVTKGSTQFNDLEMPSLENIEFGT LGSFSLTLVSPKSNKNPNTHSTSKTCADAAALALQSHPTQSRSPGFYKVGDEDHFPPL RAGTR</aaseq> |
| Gene Sequence |
<dnaseqindica>118..342#2338..2523#2773..2865#3056..3238#3350..3452#3539..3709#3930..5098#5329..6239#6722..6788#ggttttcccccaaacccccccccctctctctctctctctctctctctctctctctctttccatttgctgtgcccggatcccgcatggccaccggcggcggggtctaggaggaggaggatgatggcgggcggtgggggtgggggagggggagggacgctggcggcggcgatggcgagggcggcgccgggggcggcggcgatcccggcgggggcggtggcgcgcgcggaggaggcggcgggcgaggtggtgcggcgggtgcggcccacggaggcatccgagcggcgccgcgcggcggtcgtcgggtacgcgcggaggctcgtcggcaccgcgctcggctgcgaggtgagtgcccgggcggttcgcggcggggcgcgcccttctgcccccgtttccactccaatttcgggtttttgaggtttctcgggattctcatcctcgtttgattggggcgttttattcttcatttttttttgtttagtgtttactctgcttccgtcgctgtctgtgggatttgacgggaattctctccacgggaggattatcctttttaattaatcggcttaggttcgtacggatcaagactgattcctaaactatttgctcgcggcgcgtcgttgcaattctgccttgttttattttcgctgaccttcacgggggaacaaaatcgggatcatttttttatttcacattttttaattactaataataaactactattaactagccctcgtgaatccaaactgctgaattccgaactttagctgaggccaccgtgcgctcggatctatggccttttcgctttttggtttaataaagggttttctttttctgatggaacgtttcttgacgcgttcaagtatttattttctgttggcacaataatgttttatgttcgcttgcaagcatcacttccagttccaacgaaaaggcacgaattgctttataaaatccaactttctacatcctaaaagttcctttcaggcggaaacaactttcttctgctggtccagaagagagacaaaaagaaaaagaaaaaaaaactcctttttcttgttttggttctgtttctgctcgtgatgatcttgactgcctgccaggagaagcagtacccttcacggttcactctgtccatggtgactcatgcatccacgtggatttatccaatagtgtggcaactgatcaatgctgtagctgaatcttctgggcatgttgtgtctgaattgagtattttgacatagcatctgggcatgttatgtctgaattgagtgtttcgacagagcagggggtgacatttagcccatgtacacggacagctgcctgccaacatcctgcattcagttctactgcgtactttgaattattacgagctcacaaattcacagttgtttactgatcggaattcatcggtccactgtttttagtcgtacttgaactttgtccgtgcgctcctttacttatgtgtaatctcttcgctccgtacccacagatggtagatctggaaaagtggtccttatctgttgctattctgctgaacacttttaatgcgtactacgagatgtctatacagtctttgtatagctggaattgcttggaaacgtgtggcaggctatagttgataggcattagttttgcagtaggagtcatgttgtggtgtcacctagcaaatgatattcattgggcatcaaagcagtaatgttttcgcagtaatgttttcgcttaattattgtcacatgtgtgtatgtgtgccaatagtgcgcaacacagaatccctgcaagatgccaattgactttgacttttctccgccttatatgttgtttctagttcttgtttttttttttttaaaaaaatgtcgtatttgctgattggttgcttacctgcttgaaaaatatgattttgtgattcatgatagcagctcacttggtggcatattggtcgctattttctagtcatttcatcattcatacttaagacagttatattatgatttgtttccatggatgtatttagttgttttggcgcatgcaaaactgacatgactaagtatatatgtttcttagtggaataacatgatggtgacccaacaaaaagttcatcttttaattgttctcttggaaaaaccaatggtaacacactcacataccaggaatcttcgtggatatgtgatatatcttggttgtggttctctatcatattactacctgtatatgattgttgcaatgacttcttattctatctagcaatatctgttggaccttttgacgtgccaactttttgtgcaaaaatatttctttattatttcctagttctaaaatgtttcttctttattcgatatgtaggtctttgcatatggatcagttccattgaagacttaccttcctgatggggacgttgatctgactgtactcggcaatacatcttatggtagtactttaattgatgatatctaccacatccttcagtcagaagagcagaattgtgatgctgaatttgaagtaaaggacttgcaactgatcaatgctgaggtgcaatttcttgttggcatgtttatgcttgctaattgctacacattcctagccattcatgtgaactgtagtttgggaaaatccttttgtttctgctggtaacatgtgtaatcatttcacttcttttaataattgattgaaataaattataagttaagcttataaactatgtgcctcttgttatccctatatgttatatttctcacacataaaccacctcttaatttctgcaaatgtttatacattcaggtcagacttattaaatgcactattgaaaatattgtcgttgacatctcattcaaccaaactggtggaatctgcgcactttgcttccttgagctggtataataatacttttcttttcgaaaattttatgtacttctattccactttaatgtccttctggttaattaaacaaacagttattgaatgtgtatagcactcgatattggtttcgtgtgcttgtctaggtctgcttttattttgttactatgccaaaccttggaaaagtaaatagttgttcattcttcaggttgaccgtaaagttggaaaaaatcatctagtcaagaatagcattatattaatcaaggcatggtgttattatgaaagtcgtctactaggagctcatcatggactgatatcaacttacgcactggaaactcttattctttacatattcaatctattccacaaatctctccatggccctctggaggtaagtacaaataggaaggaactggcttcttcagtcatgtaaaaacatctttaaccaataatacggattataactcttgacctttttacttcatgtttgtcttgttaataggttttatataggtttctggagtatttcagcaagtttgactgggacaactattgcataagtttaaatggccctgttgcattatcgtctttgccaaatcaaattggtgcgctacactgtaatcttatccttgactgtaaccaactaatacatatattctgtttttaccctaaaactttgtatgtcttgcagtcgaagcaacaaatacacctggcagtgatttgctgtttgacaaagagttcctcaataactcggtgcaaaaaacagattctaatgcatgcaatactgagttccgttcaaaatatctgaacataattgatccactaaaggaacacaacaatcttggcagaagtgtgaacaaaggtctgaaactaaaggcacctgtctgttttcttcctctaaattatatttcaaaagaatttctacaaagatgtatgggcatgcatatcatagcatgtgctgagatgcttcctatgtgcatataaaccataatcagcatgcggttgaacttgcacatagtaggggttttctgtacattatttcacttctactaagtttatgtagacattttacttttgtgcagccagctttaatcgtattcggactgctttttcgtatggtgctcagaagcttggtcaagttctcttgttacaaccagaacttattcctgatgaaatttatggatttttcaagaatacattgaataggattggaagtggagtaaggccagacattggagatgaaagctataatgatgcatttcgttgtgagtccttccttggtcctggcaaggcattgtgggatgagatgtcgagcatgaaaatttcctgcaataatcaagatgagaacagaggtcctcaccatctttcaaagtgcttagttaacaatgactcatatgccaccttgaatgtgcctacacattttcatggagatcacatggtagcatcaagtactgatttgagtctaaaatcgtcctgtttcatccaagagacaccaaatcagtatcctttgttttacctagaagatggcaatggtagcagcgaacagtacttggaccatgaaatggtggaacaggcatcttgttgtacagctgaaacctgccatgcgaatgaagaaccatcaatgcatccacaagtttatccaaacaatacgttacatacattttactcaagtttggccaataatttggaatattccaaatctggtcagtcagacatgacaaattcgagtataaatgttgcccatgaggaaaaacaaaaattttctccctccccattgagcttggtggatctatcaggtgatctagatttgcaattgagatgcctccgccaagttcagtatcacctagaatacatgtttgatggttttttgcagtctgttcaagaagcatcttctgactgtaaggttgcaagggactcgtttgaaattccagctgttaacatcacatcgaattctgatgtggtgctgccaggtctgttatcaccttcatctactgaaactgatgagaggagattatctccagtttcctcttctcatagcaccgaagattcttcacagcagtcacatgatgagagcaactggggtgcgtcttgtcagcagaactttttattaataccctctcaaacaattgctccaaccaatggactgtcaccatgttcttcttatgctaattcagataattctgttcaattgtatgatagctcagatgatatctccaatatgcatgaaacagatcaacatattctccaaaaggtaggagctctctgttctcagttgtcatgagtttatatctcttacttttttttggcatacattttcattgtcctcttagggccaagaaaatctagatccgatatgaatacttgactattttatatcttcattatatatgctatacatcttgtcccttggatgtctgacactgacagcttcacttaaacctttagttgttctgctaatcagttaccttatttgtgttacagcacatggtatctttaggacagaacaagacactaatcaatcgacaagtgagagttaaaagcaatcaagcatcagttccaaaaggaaaattttccatttgtaaggagcaaataacacaagacactgcaaccaaggacataaagttaagccggcatttgagagtcaaggacagtgagcatgaatatataagcactgctaagaagatttcgagctataattgtgacacttgcttagaatgtgtcaaacctgaaagtgaagcaatgataccaaggcattacaagcatgcccgctcaagcaagaactcatttgagcatcggatttatgatattgacatggggtttgcccgatctggtagttcacggaatcaaatgccaaaatatcaatcactgaagaatcaggatatgtcaagcttaaatgtccaaaaagagcatgaaattaactggcccagaaaacaaatgccatccgagctgttgaagctccaaaacagtctacgtggcagggcttgctcaaacaagaaattagctgcaaaacaaattaacaataatcacaaagaacatctatcttttgtaagggatccagaacagatgccatataatcaggttaactcaaacaaagagtttgagactgttggcaaatccagccaattattgccacgggtacagctctctcttcataacgacagaagccttacagcatctacttgtcagtcctcattccctgtgacaaaaggatctactcaattcaacgacttggagatgccttcactagaaaatattgagtttggaactttggggtctttttcattgacacttgtgtcaccaaaatcgaataagaatcccaacacacactcaaccagtaagacatgtgccgatgctgctgcattggcattgcaaagccatccaacacaaagcaggtaaaatatttatactcgctctcacattataagatattttagcgcctccatccctcgtctaaattgactatatggtgttaagttacttgcatttctctttgataactgatacatcaaaacaattggtatttggtactcccagcccaccaccctaaatatcttattaacgaatctattcaaaacctaaaatatcttataatgtgaaacaaatgaagcatctactaaatcttcagcctgcaaatatatcaaagactacacagcgaagacatttcagaaaaagtaaaggatcatttaagctctagttagtttgttatttgcatctccagttcattcagtccatgagatagtttttgtgcttttatgctactactatgtataatatgcattctgataacgtaatagtcagtccatgagatagtttttgtgcttttattctacaattcataatgtgcgttctcataatgtaatcttcgctatgttaggtcaccaggattctacaaagttggagatgaagatcacttcccacctctccgtgctgggactcgctgagactttcggtacatacacagatgatacagttgatcataggtttagagaactaaaaggtaaagagaagagctaacaggttgagcttttttcataacctcaggagagcgcaaatgcgaggattctaatagcatatatattcgtccatgtaaagttctgtcgatctcttgtcctcctcaattgtctatagttaggccaagaaggctaatgggtagcaactaattataccattgtagttcttttaccttaagtttaacttgaaagaagaaaaaatcgggggaatatgttagctt</dnaseqindica> 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