Os03g0351500

From RiceWiki
Revision as of 19:35, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os03g0351500

Description

Superoxide dismutase [Cu-Zn] 1 (EC 1.15.1.1)

Version

NM_001056653.1 GI:115453034 GeneID:4332846

Length

3101 bp

Definition

Oryza sativa Japonica Group Os03g0351500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:13233403..13236503

Sequence Coding Region

13234578..13234653,13234746..13234847,13234972..13235067,13235322..13235353,13235502..13235577
,13236039..13236092,13236206..13236228

Expression

GEO Profiles:Os03g0351500

Genome Context

<gbrowseImage1> name=NC_008396:13233403..13236503 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:13233403..13236503 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggtgaaggctgttgttgtgcttggtagcagtgagattgttaagggcactatccactttgtccaagagggagatggtcccaccactgtgactggaagtgtctctggcctcaagcctggtctccatgggttccatattcatgcacttggtgacaccaccaatggttgcatgtcaactgggccacactacaatcctgccggaaaggagcatggagcaccagaagatgagacccgccatgctggtgatcttggaaatgtcaccgctggagaagatggtgttgctaatatccatgttgttgacagtcagattccacttactggaccaaattcaatcattggcagagccgtcgttgtgcatgccgatcctgatgatcttggaaagggtgggcacgagctgagcaagaccaccggaaacgctggtggccgtgttgcttgcgggatcatcggacttcaaggctga</cdnaseq>

Protein Sequence

<aaseq>MVKAVVVLGSSEIVKGTIHFVQEGDGPTTVTGSVSGLKPGLHGF HIHALGDTTNGCMSTGPHYNPAGKEHGAPEDETRHAGDLGNVTAGEDGVANIHVVDSQ IPLTGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGLQG</aaseq>

Gene Sequence

<dnaseqindica>1176..1251#1344..1445#1570..1665#1920..1951#2100..2175#2637..2690#2804..2826#agaagctccagattccaaaccagcaggagtcgcctcgcctcctccttcatcctcctcgtcgtcgccgcgggggtcgcctgaggtaggaatcccaacaaccccccccccccccccccacccaagcaagcttctagggttttcgaccgcgcctcgcttcctccggtttcgtgggaggcggtgggtctccctccctccctgcgtgtggatctcagatgggatcggtgtttccttgttggtcttgctgcttcgcggggatttggggcttcgggcgggctgggggtggggggggggattgttgtggatgttgattgatcgatcggtgttgttggttcggggcgattggttggttggtggggaggaacggctcgtctcgtgtgtttgaatccatatgcaagttcaagtgatgcgagagtgttttgatgcgtggacctgctgcttccttttttttttttccttttgagcgatgattcgtgctgctgcggagggatacggatttgttagttgccgattactagtaataatcattggaattgtgtactgggctctggctgctcatgatgcgatgggctttgtgatatgttcatgattagatttagacatgttttttctgcaagtgtggagttgattgcagagtgtccttccctgatatgtcgggggattgggtggatgtagagaattgtagatttgggagttattggactagccaacagacagtttcctcgtgaattcgatcccttcatgcagaaatgaatggagggataggatgaaatggggtgagaagaatggatagctaagattgaaacttaccctttagatgggtgggaaatcatatcccaaaccgattttctagggataattcctctatactagacgtgtgttttgtttgtatctagtatgtttgcagtgggcagtggcatttgttctatgatgcctttggtttacatgctttggaaaaaacaatagatcattgggccatattgttatctttttctgactagtagtaaatgatgcgtctgtgttgcttctgctttaacatcttttcaatcttcactaggataatttcatagttcaatatgttctttgggaacttggttgggttttaggacctctagaggctacttctgccacttgctaagtaactgttttgtggaatttgtttacagatcacattaacaatggtgaaggctgttgttgtgcttggtagcagtgagattgttaagggcactatccactttgtccaagagggagatggtatgccatcagtcatcaccattttcatgattgtcttgaattgaattttagtccttgaatcgttgagatttactggcatgtttgattcttaggtcccaccactgtgactggaagtgtctctggcctcaagcctggtctccatgggttccatattcatgcacttggtgacaccaccaatggttgcatgtcaactggtaattattattgttattacatatatattggcttctcgcctgcctagatgtaccatcaggattgatacaggctatcatcatctgttgaattgattacttatgatgcacttgtttcataatgtagggccacactacaatcctgccggaaaggagcatggagcaccagaagatgagacccgccatgctggtgatcttggaaatgtcaccgctggagaagatggtttgttctttttccctttattccgaatttttatttgttccatacctgttaatgatttaacataaccatattagttgtggtcttgtagtccttaactcattgtcaatttgtagtaatactttattccgaatttttatttgttccatacctgttaatgatttaacataaccatattagttgtggtcttgtagtccttaactcattgtcaatttgtagtaataattgttgctgagagtttatttctctgctgtcaggtgttgctaatatccatgttgttgacagtcaggtaagtaaacattcagaaaaagaacattctccgtcatttgatttatggaaccaataccacacatccccttattattctgctgttaccttgtcttttccttctttctttttcctgtgtgttaacatggataaccatttatctgtgtcagattccacttactggaccaaattcaatcattggcagagccgtcgttgtgcatgccgatcctgatgatcttggaaagggtaatattacagacaactgtttgtgctcatttattttgtctgtgtgcttgtgtgctccttttcttctcttttgctaaggaagatctcactactgttgggtctatgatgacaacaatcactttctattgaatggattgcataaacatgctgagttagtagtcagaaatgtgtagggtccttttgttttatcataccaagttgcacacgactgtgttgtaggcatttttacctttgggggtaaaggatatctgaactttacatggaaaatttgaataagttgttctgctatgccaggcactatttgacttgaatctcctatctgtgcacttcaccataaactatttgacttgaatctcctatctgtgcacttcaccataaacctatctgtgccaattctcattgcagtgagccagttatcagtgcagcttaaataacattcattggttttggtgctcttttaggtgggcacgagctgagcaagaccaccggaaacgctggtggccgtgttgcttgcggtaagttcagaggccgtacaatccagcccacctgaaaatcagcttcgtgtcacatattgatcgactcaccacttcatctccttttctctaattctttcccaattttacttcagggatcatcggacttcaaggctgaaacctggaggtgtgaactcaccttccatctcccagcaccagaagcctgaaactctacgagctcttagccgtttcgtctttacctgagtggctactctagattctacaataagcacctgatctctgcgcatggtttttggtgtaccattctgtcgcccgcatcgttggcgcccaatgaactatgtgttttgtgttaaaccttaagctgaagggtaccatttgtagactcgatgttgctctcttcctcggaatgtcgttacatctgttcgctcgttt</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0351500, RefSeq:Os03g0351500