Os03g0386500

From RiceWiki
Revision as of 19:36, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os03g0386500

Description

Similar to Trehalose-6-phosphate phosphatase

Version

NM_001056790.1 GI:115453308 GeneID:4332996

Length

2477 bp

Definition

Oryza sativa Japonica Group Os03g0386500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:15932756..15935232

Sequence Coding Region

15932891..15932918,15933111..15933154,15933281..15933421,15933615..15933686,15934012..15934101
,15934232..15934789

Expression

GEO Profiles:Os03g0386500

Genome Context

<gbrowseImage1> name=NC_008396:15932756..15935232 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:15932756..15935232 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgacgaagcacggcgcggtggttgtcccggtcgccgccgccgccgccgacgcggagcacgacgagtggatggagaagcacccgtcggcattggggaagttcgaggcgctggcggcggcggcgaaggggaagcggatcgtcgtcttcctcgactacgacggcacgctgtcgccgatcgtcgaggaccccgaccgcgccgtcatgacggacgagatgagggacgccgtgcgcggcgtggcggcgcgattcccaacggcgatcgtcagcggccgctgcagagacaaggtgttgagcttcgtggggctggaggagctctactacgcgggtagccacgggatggacatccaagggcccaccaacgccgccgcctccaagggaggagaggaggaggaggagtcggtgctgtgccagccggcgagggagttcctgccgatgatcggggaggcgtacgcggcgctggtggagaaggtggagggggtgatcccgggggcgaaggtggagaacaacaagttctgcctctccgtccacttccgccgcgtcgacgagcgccggtggggcgccgtcgccgaccaggtcagggcggtgctccggggctacccgcgcctccgcctcacgcagggccgcaaggtgctcgaggtcaggcccgccatcaagtgggacaagggcgaggccctccgcttcctcctctccgccctcggcttctccgccgccggagacgtagaagacgacggcgacgacgacgacgcgttccccatctacatcggcgacgaccgcaccgacgaggacgcgttccgggtgctccgagcgagggggcacggcgccggcatcctggtgtcgaggttccccaaggacacctgcgcctccttctccctccgcgaccccggcgaggtcaaggacttcctccgcaagctcgtcacctgcgctgccgcatga</cdnaseq>

Protein Sequence

<aaseq>MTKHGAVVVPVAAAAADAEHDEWMEKHPSALGKFEALAAAAKGK RIVVFLDYDGTLSPIVEDPDRAVMTDEMRDAVRGVAARFPTAIVSGRCRDKVLSFVGL EELYYAGSHGMDIQGPTNAAASKGGEEEEESVLCQPAREFLPMIGEAYAALVEKVEGV IPGAKVENNKFCLSVHFRRVDERRWGAVADQVRAVLRGYPRLRLTQGRKVLEVRPAIK WDKGEALRFLLSALGFSAAGDVEDDGDDDDAFPIYIGDDRTDEDAFRVLRARGHGAGI LVSRFPKDTCASFSLRDPGEVKDFLRKLVTCAAA</aaseq>

Gene Sequence

<dnaseqindica>136..163#356..399#526..666#860..931#1257..1346#1477..2034#cacaaccaaatcaacaaccacgccattgccgttctctcctcctttccttccacaacccatctcttcctcatcctcctcctcctcttcctgctgctctctcgctctcgttggattcggtttggtttggtttgggccatgacgaagcacggcgcggtggttgtcccggaggatgccgtggtggcggcggcggccgtcgggcggcatttctcgttcccgccgccgaggacggggggcgtcggcggcgactcgtgcaagaagctggcggcgcagcagatcgacctcggcgccgcggtgatcgggtcgtggctcgactccatgaaggcgtcctcgccgcggcacaggctcgtggcgcccgcggtcgccgccgccgccgccgacgcggagcacgacgagtggatggtaactcacgcgccgcgaatttccctccctgtacatgtcggcgatgtcggtctaagccggccggcggcgcacgcgcgcggtggcgctggaactgagacacgtgtttgtgtgttttgttggtggcaggagaagcacccgtcggcattggggaagttcgaggcgctggcggcggcggcgaaggggaagcggatcgtcgtcttcctcgactacgacggcacgctgtcgccgatcgtcgaggaccccgaccgcgccgtcatgacggacgaggtcagccacccacctccctaattcaaactctcctctctttcttgaatcacccgacgacgaggaggaagaagaagaagcagcaaagcagagcactctctgctttgctctgcttctcctcctcctcctccggcgacctcgtcgacccactcgtgctgagttgctgaccggccggcggccatggctacgcgtgcagatgagggacgccgtgcgcggcgtggcggcgcgattcccaacggcgatcgtcagcggccgctgcagagacaaggtaaaaaaagaaaaaaaaaacacataatcttctttctagaactccaccgtttgctctgcaatttctgcgactttttgttggaaagtactctcacgatcacggccacacatgacatacccatcactaattaagagaaaaaaaggaaagaaaaataagtatatactcacgaggacaagcgacctagaagctcctctacttggcatgagcctcaaaaaagaaatttaaaattcttttgtcctcgcaagaaaaagaaaaatacaaaataaaaatggatttaattgttggcttgcggttgctgaaaatgacgcgttggtttgggttccaggtgttgagcttcgtggggctggaggagctctactacgcgggtagccacgggatggacatccaagggcccaccaacgccgccgcctccaaggtaatccgacgtggcacggaatagtcaacggccaccctcgcacgtgtcacttgtctggtcaaaccccctcctgagctttgagcttgagcttgagcggcaatggcggatgcttgtgtgtgtgtgtgtgcagggaggagaggaggaggaggagtcggtgctgtgccagccggcgagggagttcctgccgatgatcggggaggcgtacgcggcgctggtggagaaggtggagggggtgatcccgggggcgaaggtggagaacaacaagttctgcctctccgtccacttccgccgcgtcgacgagcgccggtggggcgccgtcgccgaccaggtcagggcggtgctccggggctacccgcgcctccgcctcacgcagggccgcaaggtgctcgaggtcaggcccgccatcaagtgggacaagggcgaggccctccgcttcctcctctccgccctcggcttctccgccgccggagacgtagaagacgacggcgacgacgacgacgcgttccccatctacatcggcgacgaccgcaccgacgaggacgcgttccgggtgctccgagcgagggggcacggcgccggcatcctggtgtcgaggttccccaaggacacctgcgcctccttctccctccgcgaccccggcgaggtcaaggacttcctccgcaagctcgtcacctgcgctgccgcatgacgtcaccttcacctgaccacagtgacactaattggcttcctcctcctccacgggaaagagaaagagagagagagaaataattaaggatcttgattagtcaattagcggttactaatccctgtattaattttagccggtcacttcatttcttcttcttctttttttatgtgtttctgttcttgctctgcggctgccatcttgattgatcgatcgatctcacaggccacagtgtgacagctcgatctgaaggtttctctattatccttaaccttcctccagctgatccaaggccttgtaattagtcgtcaatttttagcagtttgttgtctgtctgtctgtcactgaaacgggacgaattaatccgaattaatacgatccatttccacctaatttcagtttgtactgtaccgtttaatttccatctaaattcagctttgcactgt</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0386500, RefSeq:Os03g0386500