Os03g0607700

From RiceWiki
Revision as of 19:39, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os03g0607700

Description

Zinc finger, C2H2-type domain containing protein

Version

NM_001057176.1 GI:115454080 GeneID:4333423

Length

1167 bp

Definition

Oryza sativa Japonica Group Os03g0607700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:23611126..23612292

Sequence Coding Region

23611308..23612045

Expression

GEO Profiles:Os03g0607700

Genome Context

<gbrowseImage1> name=NC_008396:23611126..23612292 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:23611126..23612292 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcgagtcgatagggagatggagagaggggacgaggcgtcggtgaacagggggtggcttgagctcaggctaggcgtgaacggcggcggcggcgttgagacggtgccggtcacggcggcggactcctccgcgtcctcggaggccggcgaggcggacacggtgacgccgtcgcagcagcagcagcagcagcagcagggttctccttcttctccggcggcgtcgtcggcgccgaacaaggtgttctcgtgcaacttctgcatgcgcaagttcttcagctcgcaggcgctgggcgggcaccagaacgcgcacaagcgggagcgcagcgccgccaagcggacgccgtcgtcgtcgccgtaccacctccaccaccacaggatgatgatggccggcgccggcctgccgctcgaggcgcacgccgcgttcatgcgcgccgccctccgcgtcaacccggcgggctcggcgatccacaagcagcagcagcagcaccagccgccgccgccgatcacccaggacgccacggcgccgaggttccacgacggcgcagccgtggcggcggcggcggcggtcacgccgtgggcgcccgtcgccccactcgcctacgacgaggtgctcagctcgtcggcgtcgtcgtggcccgggagcttcaggttcagaacgcagcctgagcctcctcccagctcggagcaggagccgccatcagagcagagtaagaagatagacttgagcctcaggctgtga</cdnaseq>

Protein Sequence

<aaseq>MRVDREMERGDEASVNRGWLELRLGVNGGGGVETVPVTAADSSA SSEAGEADTVTPSQQQQQQQQGSPSSPAASSAPNKVFSCNFCMRKFFSSQALGGHQNA HKRERSAAKRTPSSSPYHLHHHRMMMAGAGLPLEAHAAFMRAALRVNPAGSAIHKQQQ QHQPPPPITQDATAPRFHDGAAVAAAAAVTPWAPVAPLAYDEVLSSSASSWPGSFRFR TQPEPPPSSEQEPPSEQSKKIDLSLRL</aaseq>

Gene Sequence

<dnaseqindica>248..985#aagcctccattagaattattccctcctccctacgttaccctgccggatgattgccctaccctcatctcatcatctcctccacctataaagctacccagctgatgcttccgatacgatcgagccgaagattatctgtctagtagctgatgctaagctcatcgtcgagcttgcatgatagctagtgcatcatcagctgcaagaagaacagccaagaacaagaagctgctgagctcaacaagctgtgtgcatgcgagtcgatagggagatggagagaggggacgaggcgtcggtgaacagggggtggcttgagctcaggctaggcgtgaacggcggcggcggcgttgagacggtgccggtcacggcggcggactcctccgcgtcctcggaggccggcgaggcggacacggtgacgccgtcgcagcagcagcagcagcagcagcagggttctccttcttctccggcggcgtcgtcggcgccgaacaaggtgttctcgtgcaacttctgcatgcgcaagttcttcagctcgcaggcgctgggcgggcaccagaacgcgcacaagcgggagcgcagcgccgccaagcggacgccgtcgtcgtcgccgtaccacctccaccaccacaggatgatgatggccggcgccggcctgccgctcgaggcgcacgccgcgttcatgcgcgccgccctccgcgtcaacccggcgggctcggcgatccacaagcagcagcagcagcaccagccgccgccgccgatcacccaggacgccacggcgccgaggttccacgacggcgcagccgtggcggcggcggcggcggtcacgccgtgggcgcccgtcgccccactcgcctacgacgaggtgctcagctcgtcggcgtcgtcgtggcccgggagcttcaggttcagaacgcagcctgagcctcctcccagctcggagcaggagccgccatcagagcagagtaagaagatagacttgagcctcaggctgtgatgtgagagattatactagtagattatgataggtgatcaattgatcatcatcatgatataaatccatgcatgtcctaggtgtagagctagctcttgtactaattaatttgaccagtatataatcatcatgtgtttgattcttcagtttgatatataatgattccaggaagagattagtctgcc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0607700, RefSeq:Os03g0607700