Os10g0330400

From RiceWiki
Revision as of 21:06, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os10g0330400

Description

Protein of unknown function DUF179 family protein

Version

NM_001070900.1 GI:115481543 GeneID:4348336

Length

1228 bp

Definition

Oryza sativa Japonica Group Os10g0330400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:9535286..9536513

Sequence Coding Region

9535315..9535453,9535556..9536307

Expression

GEO Profiles:Os10g0330400

Genome Context

<gbrowseImage1> name=NC_008403:9535286..9536513 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:9535286..9536513 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagacctcgtgcttccttacctccaatgcctcgccggtgaagagcatggtgatgccgtcgccggccggcgtcgtgaaggccaggccgcacgtgctcttcggcggccggcgagcggcgagctcgtcggtgaccacctgctgcagctacaacggcgagggcgcggcgccggcgatcgacccggactggcggtcgttcagggcgcagctctacttcaacgagcagtacgcgaagagcgtgaacccggcggtggcggcggtgagggcgacggcgacgacgccggagccggtgaagatcggcgacaagtgggcgcacccgctagtggagccggagaaggggtgcctgctgatcgcgacggagaagctggacgggtcgcacatcttcgagcgcacggtggtcctcctcctgtccgccggcgtgctgggccccgtgggcgtgatcctgaaccggccgtcgctgatgtcgatcaaggaggcgcaggcggtgttcgcggagacggacatcgcgggggcgttctcggggcggccgctcttcttcggtggcccgctggaggagtgcttcttcctgctggggccgcgggcggcggcggcgggggacgtggtggggaggacggggctgttcgacgaagtgatgcccggggtgcactacgggacgcgggagagcgtggggtgcgcggcggagctggtgaagcgcggcgtggtcggggtgagggacttccgcttcttcgacggcttctgcgggtgggagagggagcagctgcgcgacgaggtgcgcgcgggcttgtggcgcgtggcggcgtgcagccccgccgtgctgggcctcgccaccgtcgtcaagggcggactctgggaggaggtgcagggcctcgtcggagagaggagggtgtggtga</cdnaseq>

Protein Sequence

<aaseq>METSCFLTSNASPVKSMVMPSPAGVVKARPHVLFGGRRAASSSV TTCCSYNGEGAAPAIDPDWRSFRAQLYFNEQYAKSVNPAVAAVRATATTPEPVKIGDK WAHPLVEPEKGCLLIATEKLDGSHIFERTVVLLLSAGVLGPVGVILNRPSLMSIKEAQ AVFAETDIAGAFSGRPLFFGGPLEECFFLLGPRAAAAGDVVGRTGLFDEVMPGVHYGT RESVGCAAELVKRGVVGVRDFRFFDGFCGWEREQLRDEVRAGLWRVAACSPAVLGLAT VVKGGLWEEVQGLVGERRVW</aaseq>

Gene Sequence

<dnaseqindica>30..168#271..1022#actagtagcgtacactaccacagctagcaatggagacctcgtgcttccttacctccaatgcctcgccggtgaagagcatggtgatgccgtcgccggccggcgtcgtgaaggccaggccgcacgtgctcttcggcggccggcgagcggcgagctcgtcggtgaccacctgtgagtgatcgatcacatgtttggttggtgattctttgatggattcttgttttgttgggtttgattagatgtgtgtgtttatttggcaattggcatgtgcaggctgcagctacaacggcgagggcgcggcgccggcgatcgacccggactggcggtcgttcagggcgcagctctacttcaacgagcagtacgcgaagagcgtgaacccggcggtggcggcggtgagggcgacggcgacgacgccggagccggtgaagatcggcgacaagtgggcgcacccgctagtggagccggagaaggggtgcctgctgatcgcgacggagaagctggacgggtcgcacatcttcgagcgcacggtggtcctcctcctgtccgccggcgtgctgggccccgtgggcgtgatcctgaaccggccgtcgctgatgtcgatcaaggaggcgcaggcggtgttcgcggagacggacatcgcgggggcgttctcggggcggccgctcttcttcggtggcccgctggaggagtgcttcttcctgctggggccgcgggcggcggcggcgggggacgtggtggggaggacggggctgttcgacgaagtgatgcccggggtgcactacgggacgcgggagagcgtggggtgcgcggcggagctggtgaagcgcggcgtggtcggggtgagggacttccgcttcttcgacggcttctgcgggtgggagagggagcagctgcgcgacgaggtgcgcgcgggcttgtggcgcgtggcggcgtgcagccccgccgtgctgggcctcgccaccgtcgtcaagggcggactctgggaggaggtgcagggcctcgtcggagagaggagggtgtggtgactgattacttctcaagggtgaccattatgtaattaattaattaattaatctcttaattaactcgcaagtaaagtatttactcctttcagattaatgattttaggcttttagtcatcacggtaggtttaaagagggttgtatttgtatactctgtatcttgtactcttatcgttttgcccaccactacgcgaacacacctcgatgcc</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0330400, RefSeq:Os10g0330400