Os03g0712300

From RiceWiki
Revision as of 19:41, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os03g0712300

Description

Similar to CROC-1-like protein (Fragment)

Version

NM_001057598.1 GI:115454924 GeneID:4333892

Length

4947 bp

Definition

Oryza sativa Japonica Group Os03g0712300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:29542081..29547027

Sequence Coding Region

29542173..29542206,29545866..29546005,29546098..29546223,29546309..29546435,29546758..29546816

Expression

GEO Profiles:Os03g0712300

Genome Context

<gbrowseImage1> name=NC_008396:29542081..29547027 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:29542081..29547027 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggggtccgagggatccgccggggtcgtcgtcgttcccagaaactttagactgcttgaagagcttgagcgaggtgagaagggcattggtgatgggacagtgagctatggaatggatgatgctgatgacatatatatgcgttcctggacaggaactatcattggccctcctaatactgttcatgagggacgaatctatcagttgaagttgttctgtgatacagactatccagacagaccacctactgttcgattccagactcgaatcaatatgtcatgtgtgaatcaagaaactggaatggttgaaccaagtctattccccatgcttggtaactggcaaagagaacatacaatgcaagacatcctgatcggcttaaaaaaggagatgtctgctcctcagaatcgtaggctccatcaaccccatgatggcaatgaagatcaaagagtagaacagaaagggctatcgcttaggtgtgtcatcatgtaa</cdnaseq>

Protein Sequence

<aaseq>MGSEGSAGVVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDI YMRSWTGTIIGPPNTVHEGRIYQLKLFCDTDYPDRPPTVRFQTRINMSCVNQETGMVE PSLFPMLGNWQREHTMQDILIGLKKEMSAPQNRRLHQPHDGNEDQRVEQKGLSLRCVI M</aaseq>

Gene Sequence

<dnaseqindica>93..126#3786..3925#4018..4143#4229..4355#4678..4736#gctaccactacacgagctcgggaggaaggaaggaaggaaggaaggaatcgcaaggcgaagagtcggagctggcggaggaggaggtgctcgcgatggggtccgagggatccgccggggtcgtcgtcggtgagtagccagggaacccttgccgaattttggttttgtggtggtggatttgggtggggtggggggatcttcgcggccggtcaagaacgcgagagttggttgagttcttgatgggatttttaggggctgattctcgtgtggtagggcgtaatttctctggacgtgcgcgtaggcaagattcaagaaactctgagagcaaatgtagattcgtgaggaattaggatttgttagattcgtgaggagttaggattgcttcgggattagattgttctgtaaaggggaatgctgagggggtagtctcagctctcggttcccaattcgccgaactcttagcactgtgaattcttgttcaattgtttgttcttttgtggctaagctaagaattggagcaattttatatggatggaaacgatggatttaggggtactagctggatttgttggttgctcacgtttatcttcaatcgcgaattattgcatatcaataagtttgtcttatcattagttcctgagtttgatcctaatatcagtatttttggcatttctaccatttcttggtttgggtattttttgcataacaagatgaacaatactgctacttcatagggggggggagagagagagagagagagagagagagagagagagagagagagagagagaggggatccctatatttggtcattgcaaaataaaaaatccgcaattaagtcactcaagtctgatcatgtgtttgaatttggtttactaatactttacagccacagctgtggcttgtcagctaccccacttgttcatagacatgttttttttttaacccaaattgtagattggcacatttttttttccaatatgcaactaaggccgagtttagttctaaattttttcttcaaacttccaactttttcatcacatcaaaactttcctacacacacaaacttccaactttccgtcacatcattccaatttcaaccaaacttccaattttggcgtgaactaaacacaccctaatgataatttttccttgaatacgcaagatgcgctcattgcattagtagaagaagtaaggcatccaaacacgccaaagaacagcaaaaagtacaggaacttgcaccaccacaaaacaacccactgcaagggcggtgacaaaaccaaaaagtactaaaatagaagtccctagccggggtccatgagggccccttagcccccgccaaactccataggcgggcttactcacttgctaacatcaagacctaggcgggcttactcacttgctaacatcaagaccctatactaatgatattaaaatacaaccagggtgatgcattttacttttgtgatccactgtgttgtgactagcatgccacaaaataaccaaaaataaaggaagtcattcatactcttaagaaaagagacttctaagcgaatacaaagtgaatattacttccaactaataagaattgttccagcgtattctttccactaaaagatgattcgtcctcctaagacatccaactcaatttattggcattcttttctcttcttacaaatggttccaattctgaaaaaaaaaacgtaaatcttttgctttatccgaggccttgtaattattttatcttaccatttatcgtgttcttttctaaattttgcttgaaagtactccctctagtcattaatatatgacgttttttaacactaaaatatgtattaaaaacgtcatatattaatagccggagggagtactttacagaaatggaataaggttagagtggaacataataatctcaataaatggatattgaatctaccctatccatgcactgtagttttttggatgactataaactgatacattcctttatcctaaaatgatactggaactactttaggatttaatgaggaccaaaaagactgtcctagtagcatatgcattttgttaagggagactcaacttttatgattcttattaggtctatgcaccaggttaatatattgttatatctagagcggaaaccagagtttactttcggagtcaataatttgctctttcgttaattcataatggcaggaaagacccttcatttattcacacaagatggccttcttatttcccaatagtgcagctttgcttcccaattggtacttctcgagttaaaaaagaaatattaagcatggaattctcaacaatgcaatgactggctaaggcccactgtgcttatctttttaattgttgcagaaatgtaaacttagaaccattgcattttctttacaaatcaaattaaggttagacaaaacatggtatccaactgttatgtatttcacaatcgttctatcttttctgaatgcaataatattgccgtttgcatcttaaattaaaagaaaaacatttagccaaacacccgaacatctaaaagcagttgaaccaaatgagaatatgataatccacctcaatcgaacaggagtctaagtcagctttgcatgccctaaacatgcatttttatcgtagccatcctatagatggaccatggcaaaacagaactacagaacacattcccttgttcttgaccccatacataattgatagtaactgaaatcaattcactatatacagatcctgtgagttctgaccttagaaactttctttcttgtcactccatgcataactctctatctcatcaatgaacaatgtaagacatgaaactggtgctgaacaggtttctgcataataggcccctctgttcatctcttggctacaagttatttaatttggatgctttagtcctgccaataagtcctatcatatctctatctgaacttggaagccttttttctgaaaaaataaacattgaaggcattttttctacttggtccatcccattttagtgggcaaaatggcatcaagggcggagctaccattgaaacaaggtggtgcactaccatcgaaaacctagaaaatttcgatggaactgtgcattctagcgtttataagtgagaaatcttggatttagggcgggtcgggggcgggggtgggtgggtggttgggttcctgtgcaccacccaagcttaatgtggctccgccactgaatgccatgtgggtttgaacagcatgaaccatgtgctacatattaataagctgacacaaacattttaaatattactaaatatgctattggaattatctttaataaggaatgctttgcaactccattttttttctttgtgcttatgcagttgctacattatgttagttagccttctagtaataataggtaaatcttgtgatttgtggcataacattttctctattgttttctgtacattagttatgacttgcctttgttcccctcaaacaacacggttcttctgttatttattacatggatagatgagcatgccaatggcctggtgctacagctcatgaggaaactttcgaaatataatttaaatacgtgaatggagtgtgctcattctggaaagctgttttgacttgtgttgatgcaaaacattgtcggatcggttactacactccaattttatgttctctaaacagattaaatattattcttttttgggatttcaagcctcatgagtagctgcatacagaacaaatctagtaattcatttattgaattctttactgtgctgagtacatctctgcagttcccagaaactttagactgcttgaagagcttgagcgaggtgagaagggcattggtgatgggacagtgagctatggaatggatgatgctgatgacatatatatgcgttcctggacaggaactatcattggccctcctaatgtatgttgtataacacccattagtagatattaactgcatttgcttctgtatgctcaaactgaatgatcttttacattcaatttgtcttgcagactgttcatgagggacgaatctatcagttgaagttgttctgtgatacagactatccagacagaccacctactgttcgattccagactcgaatcaatatgtcatgtgtgaatcaagaaactggaatggtacatgtccacttgctttcctttaagctaaagtagttggtgaatcattttattggcgtagtacttacaaggagctactttctaggttgaaccaagtctattccccatgcttggtaactggcaaagagaacatacaatgcaagacatcctgatcggcttaaaaaaggagatgtctgctcctcagaatcgtaggctccatcaaccccatgatggtaatttccatatctctgcttcagtgaatttgatctacagcctcgtcgttttcccttaagcttataaaccgcaaccaaaatttgagttttaaaacttaatttcggagttaattttagtgcttttttttatcgtagtttatttctagcatttgtttttaaatcgctgaggacacgtatataaaagtttcgctcacaaattattttttgggcactgataagcagttacagtttataatcagcataagcgaaacaatgaggttgctacttgctagactgaagttgcatgttgggttctgaacctagttgctgtttctttctgcaggcaatgaagatcaaagagtagaacagaaagggctatcgcttaggtgtgtcatcatgtaagagatgcgaattgcaatgtacagtattattaaattgagtagcatcaggcgcaaaaaagagaacccatgatctcctgtaatttggcagtaactacattggatccaaaccgtgctgtcgcctcaataaaatgtcggcaacttcgttaatttgcacattgtgtaaaccgttcatcccctcgttcagtaagattgcaacttgcaagttgcaaccc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0712300, RefSeq:Os03g0712300