Os03g0743500

From RiceWiki
Revision as of 19:42, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os03g0743500

Description

Similar to Calmodulin 1 (Fragment)

Version

NM_001057768.1 GI:115455264 GeneID:4334072

Length

2092 bp

Definition

Oryza sativa Japonica Group Os03g0743500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:31280729..31282820

Sequence Coding Region

31280813..31280885,31281947..31282104,31282221..31282301,31282388..31282540

Expression

GEO Profiles:Os03g0743500

Genome Context

<gbrowseImage1> name=NC_008396:31280729..31282820 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:31280729..31282820 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaagggctgacgagcgagcagatggtggcgttccaggaggcgttcttgctcttcgacaagaacggcgatggatgcatcaccttggaagagctggctgcggtgactcgttctcttggccttgagccgaccgatcaggagctcaacgacatgatgagggaagttgatacagatggcaatgggatcatagattttcaggagttcctgagcctcattgccaggaagatgaaggatggggatggcgacgaagagctgaaagaagctttcgaggtcctagacaaggatcagaatggttttatctccccaactgagctgaggacagtgatgaccaatcttggggagaagatgacagacgaggaggttgagcagatgataagggaggcggataccgatggcgacgggcaggtgaactacgatgaatttgtgataatgatgaaaaacgctgaacggaagatatctgggtga</cdnaseq>

Protein Sequence

<aaseq>MEGLTSEQMVAFQEAFLLFDKNGDGCITLEELAAVTRSLGLEPT DQELNDMMREVDTDGNGIIDFQEFLSLIARKMKDGDGDEELKEAFEVLDKDQNGFISP TELRTVMTNLGEKMTDEEVEQMIREADTDGDGQVNYDEFVIMMKNAERKISG</aaseq>

Gene Sequence

<dnaseqindica>85..157#1219..1376#1493..1573#1660..1812#gcttcttcacccaactaccaccacctctgtgttttcctgcactctccttgctagtggtgtgactgtgaaggtggcggagcctgcatggaagggctgacgagcgagcagatggtggcgttccaggaggcgttcttgctcttcgacaagaacggcgatggttagtttcaactctcctcttgccttccttccttttggtttcagcgtttgctgagattgttgttcgtttgcatttcttggttatagctgtgatgattttggaagcaatgttaggagtttcagagtaattggtcttggggaatcttgttttgttgtttatgtcaactgttgatgataggaggatagagcatggagggagaaaagtaaagggttcttgtctgaactgttcaacttgtcgcttagaactttctattgcatcctacttgctgagacatttttttcctcgaaaactcctcggtgtaaagaaggctgaccttatctgaatcgttacttttttcaataatgatctaaatcatttagatggttcaggaattttttatatatatgtattacatcttgttttaatttgtgtgctggagctgtagatggaattggaatttctgtgttcttaggaaacgtttccctgaagtttctacgctgcccaatgacagggatttgcttgctgcacgactagtttgagagcttcctttggtcaaagaatcattcagtttgtgacagaaaggtgcttgttattggctcactcgttttcttgactagtgagggccctttaatctttgcaatgtgtaacctacctaatttgtttagaaaaagttgttgagacatgcttatctagtggtcaagttccttaagtaatccgtaatatgtcctccaaaactgcttttctgatatttgtgctaccactacttgccattaactctatgatatacacatagttattattaaatagtagttaaaccattcattggcccttgacgtctctatcttggtcaatgattctgaccgtgttttgcacatggtgtggtcttggtcttcgttttggatatgcacaaaaacctactatgtgctagtaagcaaatagcaatagcattggaggcatgttttcacggctattatcttcagttacacaacaatgaaatcctgctaatatttacagccttcaggtctatgcgtctatgatatcctaattgacatttgatattggaacctttgtcatatatgtaggatgcatcaccttggaagagctggctgcggtgactcgttctcttggccttgagccgaccgatcaggagctcaacgacatgatgagggaagttgatacagatggcaatgggatcatagattttcaggagttcctgagcctcattgccaggaagatgaaggtgaagcttgaactttgatggatactttaatttgatgatctacagtatctgtttcccctttgccaaactagatttccaatatctgtctctgcaattgcattccatgcgtatcgcaggatggggatggcgacgaagagctgaaagaagctttcgaggtcctagacaaggatcagaatggttttatctccccaactgaggtggtttagtacctcaagcagttcagaccattaattttcaagctgttatccatcatttctgaccatgttcttgttcatgtgtgcagctgaggacagtgatgaccaatcttggggagaagatgacagacgaggaggttgagcagatgataagggaggcggataccgatggcgacgggcaggtgaactacgatgaatttgtgataatgatgaaaaacgctgaacggaagatatctgggtgaaaagatgccgttcatagatcataagtgtgaaccactgatccccaaatttgggagcatcttttccactgtaaattccattctctcaattactgtatttgaaccacaaaatttggacttcagctatgggtaattgcagcttgtaagattgtgatttaaaactatactaaggttgtggttttatttcaaaagttgttcgcttttgcgaactatgtattagaaattgacatatacttagaagggcgtctatccatgttttttattttttttgggaatttttttt</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0743500, RefSeq:Os03g0743500