Os03g0787200

From RiceWiki
Revision as of 19:44, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os03g0787200

Description

IQ calmodulin-binding region domain containing protein

Version

NM_001058031.1 GI:115455790 GeneID:4334358

Length

3726 bp

Definition

Oryza sativa Japonica Group Os03g0787200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:33551344..33555069

Sequence Coding Region

33551701..33551819,33551969..33552434,33553233..33553346,33553484..33553711,33553882..33554118
,33554599..33554703

Expression

GEO Profiles:Os03g0787200

Genome Context

<gbrowseImage1> name=NC_008396:33551344..33555069 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:33551344..33555069 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggcatctcggcgaggtggctcaagtcgttggttgggatgaggaaggtggagaagcagcagcagcagagcaaggaggatggagatggtgggcgagtagcacagaaaagggacggtgctaaccattttcactgccaaaatcagcacggtcaagaccatgataaccttggagcaccagaagagtttcctgatgaaaatggtccatcagaaggtgatagcaatgcactttcgtgctcggaacccgcttttagttcacctaacgtgcctgtgcctcagactgaagaagaactcaaggagatctgggctgctacagttattcagactgtgtttagagccttcctggctaggagagcccgtcgggctttaaaaggactagttaggcttcaagcccttgtaaggggtcatatagtgagaaagcaagctgctataacactcaggtgtatgcaagctttggtgagggttcaagcccgtgttagagcaaggcgagtgcgcattgctttggaaagccagacggatcagcaagctattctacaagagaaaataaatgagacacatgtgcgggaaatcgaggatggttggtgtgatagcataggatctgtggaagatatccaagcaaaactattaaagaggcaggaggcagcagccaaacgcgaacgagccatggcctatgctctaactcaccagtggcaagcaaggcaacatgcagccattacagcatttcaacctgacaagaacagctggggctggaattggctagagagatggatggctgttcgtccatgggagagccgattcctgggctcttatgcagcagatggaattcctgttagtagtggagcaatgcaagacgaggaaaatgctgtctatactccacataagaaacatgttagaagacaaacttcaacacttcattcaaacatactgaaccagaagacctgcctaccaaactcagagggcggtggttcctcatcgaaccggtctggtggttcggcatcggctaagtcaaaactgaaactgtcatccagagaaggatgtgatgaaatttcgtctcgtccttcgggacttggaactaggtcgagtagtaatcctaaggagaggactgggcatttagatcctcaaggaaataagagattctccttacctgccagctgtgtcgaagcaggcaagcgcatgacgaataaatctgcggttaaccggtccctaaaggtcactaaacatcatcttgccagttcaattgagttgcctagaagagttgagctgcagacttga</cdnaseq>

Protein Sequence

<aaseq>MGISARWLKSLVGMRKVEKQQQQSKEDGDGGRVAQKRDGANHFH CQNQHGQDHDNLGAPEEFPDENGPSEGDSNALSCSEPAFSSPNVPVPQTEEELKEIWA ATVIQTVFRAFLARRARRALKGLVRLQALVRGHIVRKQAAITLRCMQALVRVQARVRA RRVRIALESQTDQQAILQEKINETHVREIEDGWCDSIGSVEDIQAKLLKRQEAAAKRE RAMAYALTHQWQARQHAAITAFQPDKNSWGWNWLERWMAVRPWESRFLGSYAADGIPV SSGAMQDEENAVYTPHKKHVRRQTSTLHSNILNQKTCLPNSEGGGSSSNRSGGSASAK SKLKLSSREGCDEISSRPSGLGTRSSSNPKERTGHLDPQGNKRFSLPASCVEAGKRMT NKSAVNRSLKVTKHHLASSIELPRRVELQT</aaseq>

Gene Sequence

<dnaseqindica>3251..3369#2636..3101#1724..1837#1359..1586#952..1188#367..471#ggccgggttcccgggtgttggtggtggtggccactactagtagagtagagtagtagcgaggtggcgtgatgatccgggaccgggaggagtagagtagaccacccttgatctgcaaggcgcgccgctcattgggtggccagcgtcgaccaccgttttcttggccccgtctcgccgcgatctggtggtgtgcgggcacggctcttcttgccaagaagaacacgcacctagaagttcttggtgcgtgttctttgggtgattttgttttgcttcttttttgtggagagatttttgaggtttggattggttggttgctgatgagaaagattgcggctttaggtttttgtctcggttgaggggcgcggcgccatgggcatctcggcgaggtggctcaagtcgttggttgggatgaggaaggtggagaagcagcagcagcagagcaaggaggatggagatggtgggcgagtagcacaggttctctcatccattgttctgctccttgtccttctatttttcttggcatttttggttgattttgatgggggtagccgggaattcgactagttagttcgtgttaaaattcgacaacaatttgctgaaaagaaatggggaagtgaatcttgatcatgtcatggggaattctttgttgtagtgatcaacctggggtattcgttctccgctaaattaagactacagttggtacttcttgcattgcttgtttgccttgtgtaaatttatgaagttactgcagatctggatgataatatctgcatcatttttttttggcttctatgccactgacaaaaatgttgaaagatggaaaccactatgtcttttttttttttaaagaaatggaaaccatcgtgttaacaatttagcattgcattgttcgtatataataacttttttttatttggctgggtttgtaataacttgtgaactgtgaaattgcagaaaagggacggtgctaaccattttcactgccaaaatcagcacggtcaagaccatgataaccttggagcaccagaagagtttcctgatgaaaatggtccatcagaaggtgatagcaatgcactttcgtgctcggaacccgcttttagttcacctaacgtgcctgtgcctcagactgaagaagaactcaaggagatctgggctgctacagttattcagactgtgtttagagccttcctggtattgatgctctctctctttctctctctgccaatttagtaactagtccaagtccaatgcaaagtatatgcaaacatagaattgctgaaatggaattatggattttcccatgattcccaaatgtttggttcttcaggctttactacaagtttaacttgaattctcttcaggctaggagagcccgtcgggctttaaaaggactagttaggcttcaagcccttgtaaggggtcatatagtgagaaagcaagctgctataacactcaggtgtatgcaagctttggtgagggttcaagcccgtgttagagcaaggcgagtgcgcattgctttggaaagccagacggatcagcaagctattctacaagagaaaataaatgagacacatgtgcgggaaatcgaggtgagtcgcactttcagtagttttccaggtaggcttgcatgcatgctcttctcaattttcacaaggaaataactggcatgaaagtgcagtgatttggcttgagttgtttacttatgctatttaccttaaaaatgcaggatggttggtgtgatagcataggatctgtggaagatatccaagcaaaactattaaagaggcaggaggcagcagccaaacgcgaacgagccatggcctatgctctaactcaccaggtaactttatcaaacattttacaccaggacaatactcagctatgattatccaattaatcatatgaaccatggattatagcgtatactgtagtgcaccaatcaaattggtctgcatccaagtatagcttcttgatatcatgaaagtaatcgactcactgtcatctccagcatgtaacaacaagcatgcttgctaagttgctattgctggattccaaacgttgctttcatggataacagatgatgttgtctctccctccaagttagcctaataattaggctgcttgttgtttccgactttctgtactgttctgcttctgttggttagcgtttaattgtaatttcagtatgtagctaagatgagacctatttgcatgctccttctggagaaaaagaatccaatcatgataaatgaaattatttagacagttcaccgtatgttggagaagtaagaaaagggagcctttttccagtatgtggttgaggtcaaataattttttcatgcagtaaccccttccagaaataagatgaattcatatctctaaaagttttcattggttcaggtagtagattaagaatttttctagtccttcccatcattgatgtcagatacactgtcccaatgactctgtaagaactgatctctcatcagttgtggccacatctcaagtcactttgtgttggtctttggtgtgcttccatactttttgagggcttaattccatttctgataataaaataagacttaaagggaggtcattaaaaaacttgacacctgaacctattttcctcctttcgcagtggcaagcaaggcaacatgcagccattacagcatttcaacctgacaagaacagctggggctggaattggctagagagatggatggctgttcgtccatgggagagccgattcctgggctcttatgcagcagatggaattcctgttagtagtggagcaatgcaagacgaggaaaatgctgtctatactccacataagaaacatgttagaagacaaacttcaacacttcattcaaacatactgaaccagaagacctgcctaccaaactcagagggcggtggttcctcatcgaaccggtctggtggttcggcatcggctaagtcaaaactgaaactgtcatccagagaaggatgtgatgaaatttcgtctcgtccttcgggacttggaactaggtcgagtagtaatcctaaggagaggactgggcatttagatcctcaaggaaataagagattctccttacctgccagctgtgagtaaaaatctcgcatcatctgcatgtgttcatgttaagccttttctcctccttgtgacataactgaccttatctagtatacaatgtttcttaaggctcaaactcatacacttgcaattttctaaccaaatttccctaactctcaggtgtcgaagcaggcaagcgcatgacgaataaatctgcggttaaccggtccctaaaggtcactaaacatcatcttgccagttcaattgagttgcctagaagagttgagctgcagacttgacagccaatccaattatccaaagagcatccatagtcattggcaacattttcacctgagatatcgttcatggatatattggcagccttggactgtgatgatctatccaatatttcaagaaatttgctttgcattcatcgcagcttttcttggccatatagatatgcaggctcaactgaccatctcatgagagatgagaccagttggtagaagtacaaatatgtgtctgagaggagggaaccgtacatatagagttttactatttgtttagtgttgtagtacttgtaaggtgtaactaagactatgtaatagtaacaactttgtgtttttgattggtgtacctatgaatcgtgttggtcc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0787200, RefSeq:Os03g0787200