Os02g0127700

From RiceWiki
Revision as of 19:08, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os02g0127700

Description

Ribose-phosphate pyrophosphokinase 1 (EC 2.7.6.1) (Phosphoribosyl pyrophosphate synthetase 1)

Version

NM_001052298.1 GI:115443966 GeneID:4328168

Length

3685 bp

Definition

Oryza sativa Japonica Group Os02g0127700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:1437441..1441125

Sequence Coding Region

1437685..1437723,1437932..1438091,1438385..1438466,1438627..1438695,1439000..1439168
,1439264..1439407,1439771..1440019,1440386..1440559,1441008..1441112

Expression

GEO Profiles:Os02g0127700

Genome Context

<gbrowseImage1> name=NC_008395:1437441..1441125 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:1437441..1441125 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgccgctctcctactcagccgccgccgccgccgcgccgtcccctctcgccgcgcgcagccgcggcctcctccgccgaccgccgcgctcttcccccgtcgtcgtgaggtgcaagaagattgatcaactgagggcagtcaatggaataccaccatacgctccagtgtctaacagatcgttgttaagtcctgtgacgctgccgattatccgggatgcgaatattaagaatgatacaaggttgcgtatcttctcagggactgccaacccttctctttcccaggaaatagcaagttacttgggcttagaacttgggaagattaacataaaaaggtttgctgatggcgaaatatatgttcagttacaagaaagcgtaaggggatgcgatgttttccttgtgcaaccaacgtgccctcctgcaaatgagaatcttatggaacttctgatcatgattgatgcctgtaggagagcatctgctaagaatattactgcagtcatcccttattttggttatgccagagctgacaggaagtctcaaggccgtgaatctatagctgcaaaacttgtagctaatatgattacagaagctggtgcgaaccgtgtccttgtatgtgatcttcattccagtcaagccatgggatactttgacatcccagtagatcatgtttatggtcagcctgtgattcttgattacctcgccagcaagacaatatgttcagatgacctggtggtggtgtctccggatgttggaggtgttgccagggcacgtgcttttgccaaaaagctatcagatgcacctctagcaattgttgataaaagaaggcatggacacaatgttgccgaggtaatgaatcttattggagatgttagaggaaaagtggctgttatgatggatgatatgattgatacagctggaactattgccaaaggagctgagctgctgcatcaagaaggagcaagagaagtctatgcatgctgtacacatgctgtttttagcccgcccgccattgaaaggttatcaagtggtttgtttcaagaagtaatcatcacaaacactatacctctcaaggaggacaagagtttcccgcagctgactatcctttcagttgctaaccttttaggcgagacaatctggcgtgttcatgatgattgctcagttggtcatgagccatactctagcttggacattgactga</cdnaseq>

Protein Sequence

<aaseq>MPLSYSAAAAAAPSPLAARSRGLLRRPPRSSPVVVRCKKIDQLR AVNGIPPYAPVSNRSLLSPVTLPIIRDANIKNDTRLRIFSGTANPSLSQEIASYLGLE LGKINIKRFADGEIYVQLQESVRGCDVFLVQPTCPPANENLMELLIMIDACRRASAKN ITAVIPYFGYARADRKSQGRESIAAKLVANMITEAGANRVLVCDLHSSQAMGYFDIPV DHVYGQPVILDYLASKTICSDDLVVVSPDVGGVARARAFAKKLSDAPLAIVDKRRHGH NVAEVMNLIGDVRGKVAVMMDDMIDTAGTIAKGAELLHQEGAREVYACCTHAVFSPPA IERLSSGLFQEVIITNTIPLKEDKSFPQLTILSVANLLGETIWRVHDDCSVGHEPYSS LDID</aaseq>

Gene Sequence

<dnaseqindica>3403..3441#3035..3194#2660..2741#2431..2499#1958..2126#1719..1862#1107..1355#567..740#14..118#cccgcgtcccccgatgccgctctcctactcagccgccgccgccgccgcgccgtcccctctcgccgcgcgcagccgcggcctcctccgccgaccgccgcgctcttcccccgtcgtcgtggtgagctcccgccaccctccttgccccgctctgtttttttttttttgaaaaaaaaaattatcccctaatgcagcagtggtatgatgatcagtatgcagttatcgatagggttgtagatgttgcgatggtttgtgatggggcaaggagcttaggaggtgtatttgcgtcgaattttaagttggttttggacttttggttaggttgtgttggctgatttacgggagggttgtgtttattgcacaaggaatttcgattcttgttcattgtttggagctgtgcgtgctttggttttttgtgttaaatttgttcgcctcaaacaaaagtggggttcattcttttgctataaggtggcaaagcaagtgtgggtgtagtcatgttgaatttagtgtactggattggattaatgcactcctgcacacttaagctgaaaggatctttggtcgtgcagaggtgcaagaagattgatcaactgagggcagtcaatggaataccaccatacgctccagtgtctaacagatcgttgttaagtcctgtgacgctgccgattatccgggatgcgaatattaagaatgatacaaggttgcgtatcttctcagggactgccaacccttctctttcccaggtcagctgaatctctcattactttttcatgctttgcattctcttgtttcaaatttgacagatgcaacgaattgggctatgtggtttactgtggttgtaacatcaagatattgaatattattcagttcatccataacttccggaaaacagactgttagtagtggtagatgcaaaaatgtacattgagcataattaggcttaaagaggcatatagccatgaactatgaaaagtggacagctggtcctcaaaagaagtctagcagtagtatttaagtgtgacttgttacaagtagcacttgtttgactgaatggttaatctcacagtgccaaactaagatggaagtttttcttgttgtcttatctgcaggaaatagcaagttacttgggcttagaacttgggaagattaacataaaaaggtttgctgatggcgaaatatatgttcagttacaagaaagcgtaaggggatgcgatgttttccttgtgcaaccaacgtgccctcctgcaaatgagaatcttatggaacttctgatcatgattgatgcctgtaggagagcatctgctaagaatattactgcagtcatcccttattttggttatgccagagctgacaggaaggtaatgttgtcaacttgtcatacaattttttgcctccaaattatcttagtggttttgggatcattttattttttgagtggcatttgtcacatgcttgtaacactacactttattattgtttccacaaagagagcaatgacggacaaactttattattgtataaagtttagtctatgtgtccatttgtggaatcctcacagtcaggaatcagtagcattacatattgtcttaacatctgaggaacatcttatttttttgaaacaagaatatattgtcgaagttctcaatttgttgaagacttgtgttatggcacagcactctggctagcatgtcaaaactaacaaaagcatttcctgctttcagtctcaaggccgtgaatctatagctgcaaaacttgtagctaatatgattacagaagctggtgcgaaccgtgtccttgtatgtgatcttcattccagtcaagccatgggatactttgacatcccagtagatcatgtttatggtcaggtatgcactgatgcatgttgactgataactgcttgcatgtgatttcatttatgattataactttgtctttctttttgattctttgatctgtcaagcctgtgattcttgattacctcgccagcaagacaatatgttcagatgacctggtggtggtgtctccggatgttggaggtgttgccagggcacgtgcttttgccaaaaagctatcagatgcacctctagcaattgttgataaaagaaggcatggacacaatgttgccgaggcaagtagagcattctttgctttctggtttatacaggataaacatttatgaatgcaagtaggaaaaataacttagttcgttctaagttcttctgatcttctccatattgtgtgtattaactgcagtctacgatgatgcatagaaggaaatattctctggcaccttttcctagattcaatctgcatgttatagtacttaatgcattttcagacgagtctatatcactacatgttgcatacttgtttaaattttcatgctttgtgagattaaaccactacagtttatcatgttcatttttttacaggtaatgaatcttattggagatgttagaggaaaagtggctgttatgatggatgatatgattgatacagctggtaagttctcatctgaactgttctcattcatgattcatccaaggcagttgagaatttaattttagcattaaattgcacacacaactaaaattactctttgcctttctttgagatatttcgcttccaaatatcaatattctaatgaaaccaattaaattaggaactattgccaaaggagctgagctgctgcatcaagaaggagcaagagaagtctatgcatgctgtacacatgctgtttttaggtatgctatatttgtaccaactatggtatttccagtagatattgatgtagtaagctagctgaacttgatttaccatggagaagctcagaatcctttgttatgttatagacatactttattcatgcttttggtggaactcagttttgtacaagttctcctaaacaatacagaggttacaattatttaccacacttgactatgcagcaaagataacgttcctgacattaaatttgactcatgctttgttatttttctgtggaaaatttataatatttgtacattgcctttttcagcccgcccgccattgaaaggttatcaagtggtttgtttcaagaagtaatcatcacaaacactatacctctcaaggaggacaagagtttcccgcagctgactatcctttcagttgctaaccttttaggcgagacaatctggcgtgttcatgatgattgctcagtgagtactaagtagcaacaacttgccagttatcacgcaaactctgctcttttatgtgctagatttggtgcttccaattaattacacacctcatgtcttaatgctcatgttactatatataagaattcagttgcaattttcttttcctgtgcgcaactctttcaatatgcatagactgatgatgccctaaattattaaaccaatgcaggttggtcatgagccatactctagcttggacattgactgaagctcaaggtgtatcacgcccaatccccaatttttggcttttctccacctttggtttcgtggaataagctgtgtaatctgatgctcctactagtgcaagaacttttgagtatttcaatgaaccatagtacataagatcgaaatttaggtagtttggtttgctagcatgctcagtgtaatgtacatattgtttccacgtgatccatttatttctttgcaaagatcaatgctgaatggttcaattt</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0127700, RefSeq:Os02g0127700