Os02g0177400

From RiceWiki
Revision as of 19:09, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os02g0177400

Description

Conserved hypothetical protein

Version

NM_001052602.1 GI:115444574 GeneID:4328483

Length

4432 bp

Definition

Oryza sativa Japonica Group Os02g0177400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:4264386..4268817

Sequence Coding Region

4264756..4265002,4265365..4265437,4265534..4265630,4265736..4266007,4266114..4266240
,4266902..4267139,4267508..4267620,4267722..4267762,4268569..4268788

Expression

GEO Profiles:Os02g0177400

Genome Context

<gbrowseImage1> name=NC_008395:4264386..4268817 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:4264386..4268817 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcaaccgccgccgcaggcgatgatccaccgtcaccgccgccgccagcggagcggcccggagggtggttctccggcctggtatgcggcgccggccgcctcctcgccgccgtgctcggcccggactcccccgactccggcaccggcggctccgcttcctcctcgcaggagtcgtcgtcccagtctccgccgcctccgcgcggccaccgcggcagtggcgataatactgcgcactttgcttctaacaatcagttcaaccagagcggaaaggagattactctaaaagacagtggtgtgggatccttagcacttgtctcagagatagatcccaaggatgctatactgcagatgcttttgcaagaaacgtactcaagatcggaatgtgatatactgataaagataattcacgagcgggttgtggactcagaccctgatgtggttgaaccttctattgttcttccaattgcttggcaaactagccaacagcaagatcatgttccatactcttcatttcgtccaaacacttgctctgcgagttcaaatgttcatgattgtagccaacagcttgacaacaacattgttgagaacggatggcttgaagagagtcagcatgctctgaaaagaagtaattcttgcactggacataacctcgatgagtctcactcccgaagtgtcagaccaaagctaaatgatttgaacatttcaaataggcaggatggtattcttaagagtcattcagatatagcttcatttgaagaggcaaccaccaagtaccctaatgcattcagggggataccagaagatacaaagaagctgttcaaagatatcccccttctcgggacggacaacctaatattttccaacattgtttcatatgatgacactgataatgacatatcagctctccgtggtaagcgtcctgctgtaactgcacggacctttgcttcagccactagtgaagccaaccgggataaccgttgtcctaccatgctctatccatactctgatcgggacctgacaaatacctttcctattaaggtggaacctttggatgatattgttccttttgatcctgaaatagtagtcctttcacgcaaaaaccgtaacacaggcaccatctgcaatgacccttgttctgtttcaaaacttatgtttcaagaggacaaggaggctgcgcccagttcatcaacaggcgtgccgcttgaaaacagtcctaggaattgcacaggagctagcctgcaaaggagcactcaaactaggagaagttcacctgctaatgtatatcgtcgccaatacattgacagcagaacccgatcaaggagtggtccatcacatcaaggcgaaccgatagcggttggccaggagccagacttggctccaacccaggcgaagaaaccggttgggaggccaaggaagtcaagaaggtga</cdnaseq>

Protein Sequence

<aaseq>MATAAAGDDPPSPPPPAERPGGWFSGLVCGAGRLLAAVLGPDSP DSGTGGSASSSQESSSQSPPPPRGHRGSGDNTAHFASNNQFNQSGKEITLKDSGVGSL ALVSEIDPKDAILQMLLQETYSRSECDILIKIIHERVVDSDPDVVEPSIVLPIAWQTS QQQDHVPYSSFRPNTCSASSNVHDCSQQLDNNIVENGWLEESQHALKRSNSCTGHNLD ESHSRSVRPKLNDLNISNRQDGILKSHSDIASFEEATTKYPNAFRGIPEDTKKLFKDI PLLGTDNLIFSNIVSYDDTDNDISALRGKRPAVTARTFASATSEANRDNRCPTMLYPY SDRDLTNTFPIKVEPLDDIVPFDPEIVVLSRKNRNTGTICNDPCSVSKLMFQEDKEAA PSSSTGVPLENSPRNCTGASLQRSTQTRRSSPANVYRRQYIDSRTRSRSGPSHQGEPI AVGQEPDLAPTQAKKPVGRPRKSRR</aaseq>

Gene Sequence

<dnaseqindica>3816..4062#3381..3453#3188..3284#2811..3082#2578..2704#1679..1916#1198..1310#1056..1096#30..249#cttccctccaattctccacttccccatccatggcaaccgccgccgcaggcgatgatccaccgtcaccgccgccgccagcggagcggcccggagggtggttctccggcctggtatgcggcgccggccgcctcctcgccgccgtgctcggcccggactcccccgactccggcaccggcggctccgcttcctcctcgcaggagtcgtcgtcccagtctccgccgcctccgcgcggccaccgcggcagtggcggtacgcgatccttccctcgagcggagttctagaatccgagtgcgctgcgttgttttgcgccgtggttgatgctgtttgccctcgcgggtgttcggcgtgagccgttgccgtccgtcgctggagatggtggcgcgtccgtgtggttggttagcctgcgaaatattcgagtgaatttggcgctacctaatcctgtagttaatttttgcacaaaccgagtgcagcatcacacgaacacggagttagaggtataataatatgatcggattctctaggttttagtagtggtttcatttgccaatttggagagaacttggagaaatattttttcctcacggatattgtactgaacctgttaattttaaaactagagaagtgtaggtggccttgtgttttctgtatgattgccagtgatctggtcattggtttgaacagtagggggaaaatggtgtggggtgttgggctgaatcccattgtacaatgcttgaaaattgagactggaatttgaccttgtcgatgctcctctctctgccacctgaagtttcagttaatctctggtaggacaaagcattgaaacatacttagtttttctttttcctgtagcttttctaaaagcacatgcattctactcctacattatctaagaacgccatacatgcaactattgaatccttttgatgcgatactttgtagcaacagatgattagattaaccccattactctgttttgtgcttcacatttctcgatgatgaaaacacatcaaagtttgctccctttttgcctgatctatatcttcttaaatgaacagataatactgcgcactttgcttctaacaatcagttcaaccaggtatttccatctttgtacatctctgtagttcaagtggactgtaaatcttagtttaggagtgatgaagagattgatcaagaatgtccttttcatgatcatagagcggaaaggagattactctaaaagacagtggtgtgggatccttagcacttgtctcagagatagatcccaaggatgctatactgcagatgcttttgcaagaaacgtactcaaggtatcataccttatatctttgttttcttctgctgtagttttttagttgtacaaccaatcttttcactattggatctgtattagcttaatcatatgagtttattttcattgaatttcagtacttccttccggtgaaaaattttagtactttcataagctaaatgtatctgtggccggcaattactaatatatctatcagaccaaatttcaagagcgtggcctttctgttattatctccttgagatgatatagaaaaaaagacataagtttgatagggaaattcgttcttattatgactatttatcacagaggcaatttctgaacatattgactgctaagtttgacttcaattcttcaattacgtgccagatcggaatgtgatatactgataaagataattcacgagcgggttgtggactcagaccctgatgtggttgaaccttctattgttcttccaattgcttggcaaactagccaacagcaagatcatgttccatactcttcatttcgtccaaacacttgctctgcgagttcaaatgttcatgattgtagccaacagcttgacaacaacattgttgagaacggatggcttgaagagagtcagcatgtgagtccccaactctctgaaccttgtggaaatatactttacactaaatatgttggtactcaagatcacagaatttcatgacatgtatttacattgcaccttatattcgccttttcaataccattagactgtgctcagttttttatgactacttctgatgatgtaaactgccaaagtacaccatattttctgaggttttattcatgttattaatttcttctgatttttctcccatcactacaaaattcttcatagtataggccatgggtttgataattctgagctactaaccttcttgggtcattttaataccattcattttctagaccaagtgatgtttctttattggctaacagcatgcctaaaagtttttcgtgggcaatacttagtctatctcagagcaggtatctcattttatttgttcaaatcttgcatttttttgtttgaccctggaatgatgcaaacgttctaacttttcttcttgaagtggaatatcatctgctattgaatcattatagtaggagcaaacaaaactataaataatgaagatcaaaactgcagaactgcaagcctgaataaatcaaccaaagagaatgcctaaccaggttcacacagttcaatttataggagcctaacttgcagttttgttgaacaactgcaggctctgaaaagaagtaattcttgcactggacataacctcgatgagtctcactcccgaagtgtcagaccaaagctaaatgatttgaacatttcaaataggcaggatggtattcttaagagtcattcaggtaaaatatgttgtaattgttgcaattacatttcaaaaccgtaaagcctattctagtgggatatatgttggtcatcaactatttctgtgcctttattttgtgatagatatagcttcatttgaagaggcaaccaccaagtaccctaatgcattcagggggataccagaagatacaaagaagctgttcaaagatatcccccttctcgggacggacaacctaatattttccaacattgtttcatatgatgacactgataatgacatatcagctctccgtggtaagcgtcctgctgtaactgcacggacctttgcttcagccactagtgaagccaaccgggataaccgttgtcctaccatgctctatccatactctgatcgggtacttggactatacaacactagtttactgggtgtcgctctttggaatttgtcaaattcggctgtggtgccctgttactgaaagtaactccaaattttgtcacaggacctgacaaatacctttcctattaaggtggaacctttggatgatattgttccttttgatcctgaaatagtagtcctttcacgcaaaaaccgtaacagtacgtttctgcatttagtttaaagtttctgattctgtgagtataaaccttaggtttctactattaactcgtctgatactcttagtttttctgcagcaggcaccatctgcaatgacccttgttctgtttcaaaacttatgtttcaagaggacaaggaggctgcgcccaggtaatgtccatggcagccatgtatcttcaaatgggccaatgttgttttcctgttataaactcatgatatctggtatttatggttcattttgtttgttttatgactttaatacaacattgcaataatatggcatgaattgtttttcttaatatctaaattctgcaatgtgtatacatgctccataaccaatggtcagcctataatgccttactagttatgaacaatctgaaatgcatttcttctatcaagcaatgtaaactgtccacaatgaacagatgatatactactatatacattttatattttcatgataaaagaatttattgcaatacgtaagtaattgtgtccttccatctattcagttcatcaacaggcgtgccgcttgaaaacagtcctaggaattgcacaggagctagcctgcaaaggagcactcaaactaggagaagttcacctgctaatgtatatcgtcgccaatacattgacagcagaacccgatcaaggagtggtccatcacatcaaggcgaaccgatagcggttggccaggagccagacttggctccaacccaggcgaagaaaccggttgggaggccaaggaagtcaagaaggtgaggtaattctcggcttcttgattctccgttccatcctttagtttaaaaatcaagataaagctagggccataattaagcttgatgtacattcttacttactgcaggtactggaaggccagcagaagatgaagaatgcgcaagatcagaactgtaaaaggctcactccaggttcgagctaacaccagtaatttctaattaccagtattcagggagaaactgcttaatgcctttgatcgttgctatcttcagtagactaactaagcaatgctactactattctgaatttaccttcagtttcttagcacttcggaattctaaaacttttgatgagttcctttgatgtatatatatggcaagcctagcgcggcacc</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0177400, RefSeq:Os02g0177400