Os10g0410700

From RiceWiki
Revision as of 21:08, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os10g0410700

Description

Similar to SET domain protein 123

Version

NM_001071114.1 GI:115481971 GeneID:4348602

Length

2653 bp

Definition

Oryza sativa Japonica Group Os10g0410700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:14618620..14621272

Sequence Coding Region

14618915..14619033,14619168..14619239,14619632..14619811,14619960..14620029,14620142..14620268
,14620444..14620499,14620848..14620943,14621051..14621227

Expression

GEO Profiles:Os10g0410700

Genome Context

<gbrowseImage1> name=NC_008403:14618620..14621272 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:14618620..14621272 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgttccaccacctccgccgccgcctcctctgcaccgcggcggcgccgccgatccgcgtggcgctgacggagtcctccggccgaggggtcttcgccacccgccccatctccgccggcgaggtcctccactccgcgcagcccctcgtctcccacccttcccctcccctcatccacgaggtgtgctacagctgcctcaggaggaagtccgggagcggcggcggctcgagcgggagctgctacttctgcagcgacgcgtgcagggagcacgccaagggattccatggcgttgaaaagaaagcggattggtctttgtttgatgaccactgcagttcacgcggtctaaagtacccgtacatggcaaagcgactagcttgcatggttatctcaggagctgttagtgcagactgtcttgacatactccagccagcccgtttgcaccaggggacacttacagagatggaggaagagtttgcgttgttggattccacttttaggaaggcagggtttcaggaagaaatcacaacttttttgaccaaagagtggtacatcaatgtgctggcaaggatacgcataaatgcattccgcattgaactggttgcaagttcatatgagaaccttctatcctcagcagtagcctcagtatcttgtgatgcggcagttggcaatgctgtctatatgcttccctctttctataaccatgactgtgatccaaatactcacatagtttggttggccagcgcagacgcgagattaaaggccctccgcaacatcgaagaaggtgaagagctgcgcatctgctacattgacgcgagcatggacgtcgatgcccgtcagaggattctcgccgaaggatttggcttcgaatgccgctgccaacggtgcttgtctggagattaa</cdnaseq>

Protein Sequence

<aaseq>MFHHLRRRLLCTAAAPPIRVALTESSGRGVFATRPISAGEVLHS AQPLVSHPSPPLIHEVCYSCLRRKSGSGGGSSGSCYFCSDACREHAKGFHGVEKKADW SLFDDHCSSRGLKYPYMAKRLACMVISGAVSADCLDILQPARLHQGTLTEMEEEFALL DSTFRKAGFQEEITTFLTKEWYINVLARIRINAFRIELVASSYENLLSSAVASVSCDA AVGNAVYMLPSFYNHDCDPNTHIVWLASADARLKALRNIEEGEELRICYIDASMDVDA RQRILAEGFGFECRCQRCLSGD</aaseq>

Gene Sequence

<dnaseqindica>2240..2358#2034..2105#1462..1641#1244..1313#1005..1131#774..829#330..425#46..222#ctcaatcagaatcagcggctgagatctctgccagccgtccactccatgttccaccacctccgccgccgcctcctctgcaccgcggcggcgccgccgatccgcgtggcgctgacggagtcctccggccgaggggtcttcgccacccgccccatctccgccggcgaggtcctccactccgcgcagcccctcgtctcccacccttcccctcccctcatccacgaggtgagttgctccgctttactcgcctctttgccgccggccaccgcggctggaaactctaccttctccttttacggacggagcgaaatggttcggattgggctcctcaggtgtgctacagctgcctcaggaggaagtccgggagcggcggcggctcgagcgggagctgctacttctgcagcgacgcgtgcagggagcacgccaaggtgaggccttaacaccattgatttatgtactagtagtataatgacttgtgatgctacaaaattttcaagattcagtggatgttagtgtactgttcttttgtcatttgctcatttccaagttattacgatgctgtatcaagatccagtaggtgttttgcaacaaaatgtgaatggtagccttccatggtcagagcacatgaatggccaaaggcttgcaatctttcacaataatgttccttgaggaaattacatgtttatttgtcctcccttcgacaagaagatatatctgcagagggcaaccgaggatggtgttgtctaacaaggtgtgtgattttttggccaatttagggattccatggcgttgaaaagaaagcggattggtctttgtttgatgaccactgcaggtatgtctctgtccccttgtgtagatgtgtgcatcctgacctccgcattgcatctatgctcatgctcttgggttttatttttacttgttaatgccatggcgatgctattttgttaagcacgcaattgtcttggtggcttttgacttgaatttatactttgcttttcttcctgaagttcacgcggtctaaagtacccgtacatggcaaagcgactagcttgcatggttatctcaggagctgttagtgcagactgtcttgacatactccagccagcccgtttgcaccaggggacacttacagaggtagctgctttatttcagaactattgttaatttcagaacataatcttttcaactaattcatgtcctgtaatgttatttgtctggtgcttacttgaacaatgtaataatatagatggaggaagagtttgcgttgttggattccacttttaggaaggcagggtttcaggaagaaatcacaacttgtatccttcatttttctcacttgtgttatttatggccaagcagtgttgaacactaatactgataaagatacgtaatagaatggatcgaatgcatatttcaatctcgcccaacttatcttttcttatctatttttctttgacaaattagttttgaccaaagagtggtacatcaatgtgctggcaaggatacgcataaatgcattccgcattgaactggttgcaagttcatatgagaaccttctatcctcagcagtagcctcagtatcttgtgatgcggcagttggcaatgctgtctatatgcttccctctttctataaccatgactgtggtatgtcttttgaccttgcgctgttgaactaaagcaatatttaacttccttttgcctacggaatatttaaacagtgtgtcttgccatgagatacaagaatttgttattgcctttttgttgtgatgcagtaaatggtgactgttatttctaaattcttcattagcatatgtttatatctagtattgactgattggtttaccgaaattattctcgtcgacttaatatcatcgagttttgtggaaccttttggttattaatcactttagataattagaaaacaaaagtcgtttcattccgagtaatttttttttacttggatcaatattatcgcgcttatttttctttgaaatttgagacccaatcactcaccatctcccattattaactttcagatccaaatactcacatagtttggttggccagcgcagacgcgagattaaaggccctccgcaacatcgaagaaggtacgtaaatctgcggtgcgctggcccagttattctatcaccagccattgagcgcagttgaacagaaagacaaacacaccgatggctgccaaaattgttgatactgtggatgttgcatctgctatatactacaggtgaagagctgcgcatctgctacattgacgcgagcatggacgtcgatgcccgtcagaggattctcgccgaaggatttggcttcgaatgccgctgccaacggtgcttgtctggagattaaaacaccatccctttttcgttgtattttccatccttttggcatgcacattgaagccaaccgaggttaattaccattgtaaacttttcaaagatcagttgaagccaggagtcaccaatgtaactgccaggtgctcctgtttggaagatttgtaacgtgttggtgtgtgtgtgtcgacaagagtacgaatactgaatgttgttgattattaccccgatgtttaagcattagacttttggacattattagacatttgtttgacatgttactgccatgccaataacattggtgtttacag</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0410700, RefSeq:Os10g0410700