Os02g0530600

From RiceWiki
Revision as of 19:16, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os02g0530600

Description

BRCT domain containing protein

Version

NM_001053556.1 GI:115446482 GeneID:4329546

Length

5097 bp

Definition

Oryza sativa Japonica Group Os02g0530600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:20367701..20372797

Sequence Coding Region

20368043..20368111,20368224..20368406,20368529..20368678,20368765..20368847,20368965..20369067
,20369177..20369386,20369491..20369651,20369743..20369819,20369951..20370078
,20370163..20370403,20370515..20370648,20370729..20370903,20371055..20371124
,20371214..20371271,20371355..20371462,20371556..20371751,20371849..20372195
,20372742..20372744

Expression

GEO Profiles:Os02g0530600

Genome Context

<gbrowseImage1> name=NC_008395:20367701..20372797 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:20367701..20372797 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggtacacgagacaagatcacgcacactagcggcttcccaagaagaagggaaggctgctccgaagaagcagaagacagaaagcaaagagcaggaaggtggccagcaagcgccctccaagaacaagaagacagccgacaatgaagagcacgacggggagcaggagccatcaaagaacaagaagctcaaagcggaggaatctgacctgaatgggaaggcaacagccgtgaaggagttctctgaattctgcaaggccataagggaacacctcacgatcgaggacatgcgcaagatcctccaaggcaatgaacaggatgcatctggatcagaagatgcagttgtcccaagatgtgaggatgtgatgttttatgggcctcttgacaagtgccccgtatgcggtggtcagctcgagtgtaagggattgaaatacaattgcactgggactcacagtgagtgggcatgttgtagcttcagtactaacaatccttcgaggagaggtggtcctataaaggtccctgatgatgtcaagaatgatttcgtgcgcaagtggctgaagcaacaagaagggaataagtaccctaaacgtaatttggatgacgagggtatcttctcgggcatgatgattgcattgtctggaaggatgtcacgctcacatggttatttcaaggagcagattatgaagcatggagggaaagtcaacaactccgtgattggtgtcacttgtgtagtggcttccccagctgagagacatcaaggtggctctggaggatttgccgaagcactggagcgtggaactcctgttgtgagtgagaattggataattgatagcgtccagaagaaggaaaagcaacctttggctgcttatgatattgcatctgatgttgttccagaaggccgagggctgccgctgggcaaccttgatccaactgaggaggctatcgagaccttggctgcagagcttaaacttgcaggcaaaagagcagtgcacaaagattctaaactggagaaagacggaggacatatctatgagaaggatggcatcatctacaattgtgccttttctgtgtgcgatttaggaggcgatattaaccagttatgcattatgcagctgatcatggtgcctgagaaccatttgcacctatactacaagaagggtcctattggacatgaccagatggcagaggaacgggttgaagattttggtagtcgtttcaatgatgctatcaaggaatttgtccgtctttttgaggaggttactggaaatgagtttgaaccatgggagagagagaagaaatttaagaagaagtgtatgaagatgtatcccttggacatggatgatggtgttgacgtgcgccatggtggtgtggctcttcgtcagttgggagctgctgcagcacactgcaagcttgacccttctgttacttttatcatgaaacaactatgcagccaagaaatatacaggtatgctttgacagagatgggccatgatgtgccagaccttcctatcgggatgcttacagatctccatctgaaaagaggggaggagacgctactagagtggaaacaagatgtcgagtctgctccagagtctgggcctgctgctgacgcattctggatggagatcagcaataagtggttcaccctattccccacaactcgtccatatacaatgaagggatatgaacagattgctgacaatgtggcttctggtttggagactgttcgtgatataaatgtcgcttctcgtcttattggtgatgtgtttggttcaactttagatgacccactgtctcaatgctacaagaaactaggctgttctatcaatcgtgttgttgaagactcggaggactataagatgatcctgaagtatctggagaaaacctacgagcctgtcaaggttggcgatgtggtttacagtgctactgtcgagcggatatatgctgttgaatcgagtgctcttccttcttatgatgaaataaagaaacttccgaacaaagttctcctctggtgtggaacaagaagttcaaatttgctcaggcacctgcgcgatggtttcgtgcctgctgtctgccatataccagtgccgggatacatgtttggcaaagccatagtttgctcagacgcagcagccgaagccgcgctctacggcttcacggcggtggatcgtccggagggttacctggtcctggcggtggcatctctggggaaagagatccaggagataacaggcacgccaggctcagaggacgtgaaacgcatggaggagaagaagatgggcgtgaagggagtcgggaggaagacgaccgacccgtcggagcacttcacctggagggacggcgtcacggtgccgtgcggcaagctggtgccgtccacgaacaaggacggcccgctcgagtacaacgagtacgccgtgtacgaccccaagcaggtgagcatcgcgttcctcgtgggcgtgaagtacgaggagcagaacatggaggtggtgccggacgagtga</cdnaseq>

Protein Sequence

<aaseq>MVHETRSRTLAASQEEGKAAPKKQKTESKEQEGGQQAPSKNKKT ADNEEHDGEQEPSKNKKLKAEESDLNGKATAVKEFSEFCKAIREHLTIEDMRKILQGN EQDASGSEDAVVPRCEDVMFYGPLDKCPVCGGQLECKGLKYNCTGTHSEWACCSFSTN NPSRRGGPIKVPDDVKNDFVRKWLKQQEGNKYPKRNLDDEGIFSGMMIALSGRMSRSH GYFKEQIMKHGGKVNNSVIGVTCVVASPAERHQGGSGGFAEALERGTPVVSENWIIDS VQKKEKQPLAAYDIASDVVPEGRGLPLGNLDPTEEAIETLAAELKLAGKRAVHKDSKL EKDGGHIYEKDGIIYNCAFSVCDLGGDINQLCIMQLIMVPENHLHLYYKKGPIGHDQM AEERVEDFGSRFNDAIKEFVRLFEEVTGNEFEPWEREKKFKKKCMKMYPLDMDDGVDV RHGGVALRQLGAAAAHCKLDPSVTFIMKQLCSQEIYRYALTEMGHDVPDLPIGMLTDL HLKRGEETLLEWKQDVESAPESGPAADAFWMEISNKWFTLFPTTRPYTMKGYEQIADN VASGLETVRDINVASRLIGDVFGSTLDDPLSQCYKKLGCSINRVVEDSEDYKMILKYL EKTYEPVKVGDVVYSATVERIYAVESSALPSYDEIKKLPNKVLLWCGTRSSNLLRHLR DGFVPAVCHIPVPGYMFGKAIVCSDAAAEAALYGFTAVDRPEGYLVLAVASLGKEIQE ITGTPGSEDVKRMEEKKMGVKGVGRKTTDPSEHFTWRDGVTVPCGKLVPSTNKDGPLE YNEYAVYDPKQVSIAFLVGVKYEEQNMEVVPDE</aaseq>

Gene Sequence

<dnaseqindica>4687..4755#4392..4574#4120..4269#3951..4033#3731..3833#3412..3621#3147..3307#2979..3055#2720..2847#2395..2635#2150..2283#1895..2069#1674..1743#1527..1584#1336..1443#1047..1242#603..949#54..56#gagatccctgatgctcgtcgccgctccctcctgttcctcgcccacgcgtcatcatggtctgcgctgttgtacttgtgcctcctctgctctttgcattgccgcctccatctttttctttaaacttttaatccattattcatagcagctttgatcttatagtttgcagttgtttgtgtggacggattgtttcttggttggcccttaacctttgtgagtgttcaatttgtagtagactagtagtagctctttgttttctctgagattattgagtattagtagtgtgctttgcttgcagcttgctaatcaggttcgccaattgatggtaaagattatctaagattcagtagttttgttgggtaactagtttattagttgctagttcaacgattctgaataagtagattcatatgtgttggaatcaacttcactaaagctttagccttcaggaattaggagttaagacatctgtttttccaatcatgagggagacccccaaccccaagtcgtctccagttttaacaattggaaagtggttattttcaaaataatcactttccaattgtttgtgcgaatctcattttgaactgttattatcttttcaggtacacgagacaagatcacgcacactagcggcttcccaagaagaagggaaggctgctccgaagaagcagaagacagaaagcaaagagcaggaaggtggccagcaagcgccctccaagaacaagaagacagccgacaatgaagagcacgacggggagcaggagccatcaaagaacaagaagctcaaagcggaggaatctgacctgaatgggaaggcaacagccgtgaaggagttctctgaattctgcaaggccataagggaacacctcacgatcgaggacatgcgcaagatcctccaaggcaatgaacaggatgcatctggatcagaagatgcagttgtcccaagatggtattgtctatttaaaaatatgaaactattcttttatcaaaatatcgaatttagtcttatggtggattcagtgtaacgatttgctccatcgctgcagtgaggatgtgatgttttatgggcctcttgacaagtgccccgtatgcggtggtcagctcgagtgtaagggattgaaatacaattgcactgggactcacagtgagtgggcatgttgtagcttcagtactaacaatccttcgaggagaggtggtcctataaaggtccctgatgatgtcaagaatgatttcgtgcgcaaggtaacgaagctgcattttgagtatttatttgctatctttgctgcatgtcttgggttactgtatataagctgcattttgtttcttcttctgcagtggctgaagcaacaagaagggaataagtaccctaaacgtaatttggatgacgagggtatcttctcgggcatgatgattgcattgtctggaaggatgtcacgctcacatgtaattcctctgaacattgcttccaattcactctatgttaatgggtttcaggaatctaattctgttggtactaaaatggacagggttatttcaaggagcagattatgaagcatggagggaaagtcaacaactccgtgattggtgtgtatcttatctatttaatctagtctgatctagttcatcataatgcaagataacacagttgggagtccattcctttgtgctcgcaggtgtcacttgtgtagtggcttccccagctgagagacatcaaggtggctctggaggatttgccgaagcactgtaagcccttgccttctgttctttgatatattccttcctctgaacagcgatagaatggattaagatggttgaataaaaatacttgcgacactggatgatggaacgtattactgaatattgatttcttcttacatctgggaccataccacagggagcgtggaactcctgttgtgagtgagaattggataattgatagcgtccagaagaaggaaaagcaacctttggctgcttatgatattgcatctgatgttgttccagaaggccgagggctgccgctgggcaaccttgatccaactgaggaggctatcgagaccttggctgcagaggttgttgcctggtcaagtgcatttcataaattgcacctttggttttagtatctctagtaatttgcttgttttttcttcagcttaaacttgcaggcaaaagagcagtgcacaaagattctaaactggagaaagacggaggacatatctatgagaaggatggcatcatctacaattgtgccttttctgtgtgcgatttaggaggcgatattaaccagtatgtttatattctcattacatattaagcattatgttctcattacatattaagggaatgggtggcagtcaagtgtatctggatttagcaacttaagacggctctttgcaggttatgcattatgcagctgatcatggtgcctgagaaccatttgcacctatactacaagaagggtcctattggacatgaccagatggcagaggaacgggttgaagattttggtagtcgtttcaatgatgctatcaaggaatttgtccgtctttttgaggaggttactggaaatgagtttgaaccatgggagagagagaagaaatttaagaagaagtgtatgaagatgtatcccttggacatggtacttcactcttctagcttatttctttttgatttcatacctgtattacccatgaatgttgttgtattttgttctccttgataggatgatggtgttgacgtgcgccatggtggtgtggctcttcgtcagttgggagctgctgcagcacactgcaagcttgacccttctgttacttttatcatgaaacaactatgcagccaagaaatatacaggtcttatataaatcactacttctgagttactcagttgagacaatgtggttcttttattattatttttccgcttggataatgaactatcatgtgtttcttatggagcttactcttagagcttcttgtcacaggtatgctttgacagagatgggccatgatgtgccagaccttcctatcgggatgcttacagatctccatctgaaaagaggttaggttatcttatttattgcatttagcagttacttcatcatcgtcgcgactcatggcgtgcagagttcatcaactgttccatttggcaggggaggagacgctactagagtggaaacaagatgtcgagtctgctccagagtctgggcctgctgctgacgcattctggatggagatcagcaataagtggttcaccctattccccacaactcgtccatatacaatgaagggatatgaacagattgctgacaatgtacgatgcacagtgcatctatactcacactgttatttttatggtctgtttaatctgctttgttgatctttctttctttctttcataattcgtatggcatgcaggtggcttctggtttggagactgttcgtgatataaatgtcgcttctcgtcttattggtgatgtgtttggttcaactttagatgacccactgtctcaatgctacaagaaactaggctgttctatcaatcgtgttgttgaagactcggaggactataagatgatcctgaagtatctggagaaaacctacgagcctgtcaaggttggcgatgtggtaagatgccagattgtgctacattggactcccattcattttggtttagaaaaaaagaatcttcgtttaaattcgtatttttcctttgaaatatgcctattttcatcaggtttacagtgctactgtcgagcggatatatgctgttgaatcgagtgctcttccttcttatgatgaaataaagaaacttccgaacaaagttctcctctggtgtggtaagtgtttataactttctactcaaccccctcgcagatattaaatttatgtcactttttgggtactctaggcaatggtttaccaattatcacatgagcttcttctcttttccacaggaacaagaagttcaaatttgctcaggcacctgcgcgatggtttcgtgcctgctgtctgccatataccagtgccgggatacatggtaataattcgtcggccatgcaaatcatttctcatcctagcattgtgctgaaagattctaaaagactattcgatccatggacgcagtttggcaaagccatagtttgctcagacgcagcagccgaagccgcgctctacggcttcacggcggtggatcgtccggagggttacctggtcctggcggtggcatctctggggaaagagatccaggagataacaggcacgccaggctcagaggtactctctgatctttgatctttggatctttgacatgtttactagaatgttgccattatctaaaaaactagaatgttgccatggttgggtcctgacgctgctgccgtgtggtgttttgctaggacgtgaaacgcatggaggagaagaagatgggcgtgaagggagtcgggaggaagacgaccgacccgtcggagcacttcacctggagggacggcgtcacggtgccgtgcggcaagctggtgccgtccacgaacaaggacggcccgctcgagtacaacgagtacgccgtgtacgaccccaagcaggtaacaactacatattggtttggtgtggtgatcaaatctcagcagaagtcaagagtcttatctcgctttttcggcttcggctgacgacgatttcctttgctaatctgtgcaggtgagcatcgcgttcctcgtgggcgtgaagtacgaggagcagaacatggaggtggtgccggacgagtgatcgatcgccggccggtcacccgaccgaggccggtggcggccatctgccgttctgcagctttttagcttagagtaatggtagcgaatgcattttgggcccgtgtcccattttgggctgtgtacttgctggagcccggcagcgacggtggtggctggtgtgttcgacggtggcagcccgtgtcccgttttgggctttgccttgttctcttctcttcgtcgtttgccgtgcgggtgtgcagcgcagccacgctctgtaggctgaaagaacccgttgtcgcagtgtcaaaagtttgtacatatttgttatgtgaatcgtaatgggatgtcggggttatcagttatc</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0530600, RefSeq:Os02g0530600