Os10g0431900

From RiceWiki
Revision as of 21:09, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os10g0431900

Description

Protein kinase domain containing protein

Version

NM_001071201.1 GI:115482145 GeneID:4348697

Length

3199 bp

Definition

Oryza sativa Japonica Group Os10g0431900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:15859809..15863007

Sequence Coding Region

15860000..15860485,15861333..15861469,15861712..15861847,15861922..15862241,15862705..15862768

Expression

GEO Profiles:Os10g0431900

Genome Context

<gbrowseImage1> name=NC_008403:15859809..15863007 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:15859809..15863007 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggtaattgctggtttagagggagcttaattgttaacagagtctcttctaatgcgaagccagagactcccaagatccagagcccatcggagagggaccggagcgacgagagcaagctgccatcgaacgccaaggaggtggaggcgatgcggttggactcgtcggcgcgcaacccgctcgtcgccttctccttcgaggagctcagggcggtcaccagcaacttccgccaggactccctcatcggcggcggccgcttcggccgcgtctacaagggcgccgtcgccgcctccgccgccggcgacggcgacggcgccgagccccagcccgtcgccgtcaaggtccacgacggcgacaacagcttccagggccaccgcgagtggctggcggaggtgatcttcctgggccatctgtcgcaccccaacctggtgaggctcgtcggatactgctgcgagggcgaccaccggctgctcgtctacgagtacatgccacgcggcagcgtcgagtcccacctcttctcccgggtgatggcgccgctgtcgtgggcgacgcggatgaagatcgcgctgggcgcggcgagggggctcgcgttcctccacgaggccgagaagcctgtcatctaccgcgacttcaagacctccaacatcctcctcgacgaggagttcaacgcgaagctgtcggacttcgggctggcgaaggacgggccggtgggggacaagtcgcacgtgtcgacgcggatcatgggcacctacggctacgcggcgccggagtacgtcatgaccggccacctcacggccatgagcgacgtctacagctacggcgtcgtcctcctcgagctcctcaccggccgcaagtcgctcgacaagtcccgccccccgcgggagcagacgctcgccgactgggcgctccccctcctcacccacaagcgcaaggtcatgtccatcgtcgacccccgcctctccgccgccgccgccgccgccggcgcaggcggcgagctgccggcgagggcggtgcacaaggcggcgatgctggcgtaccactgcctgaaccggaaccccaaggcgaggccgctcatgcgggacatcgtcgcgtcgctcgagccgctgcaggccgacgacgaggcgcgcgacgccgccggcgcctga</cdnaseq>

Protein Sequence

<aaseq>MGNCWFRGSLIVNRVSSNAKPETPKIQSPSERDRSDESKLPSNA KEVEAMRLDSSARNPLVAFSFEELRAVTSNFRQDSLIGGGRFGRVYKGAVAASAAGDG DGAEPQPVAVKVHDGDNSFQGHREWLAEVIFLGHLSHPNLVRLVGYCCEGDHRLLVYE YMPRGSVESHLFSRVMAPLSWATRMKIALGAARGLAFLHEAEKPVIYRDFKTSNILLD EEFNAKLSDFGLAKDGPVGDKSHVSTRIMGTYGYAAPEYVMTGHLTAMSDVYSYGVVL LELLTGRKSLDKSRPPREQTLADWALPLLTHKRKVMSIVDPRLSAAAAAAGAGGELPA RAVHKAAMLAYHCLNRNPKARPLMRDIVASLEPLQADDEARDAAGA</aaseq>

Gene Sequence

<dnaseqindica>2523..3008#1539..1675#1161..1296#767..1086#240..303#atcccatattattcgtctccttgcttgcttctctgaatatcatcagagcttgttcagactgtgtccctgttcttgctcagcttctaatccagggatacacagagatatcgcccttttttggcagtgattatctctctctctagcttggttgagagagaagaacagcagctcttgcttgcctccttactttcttcttggtgttcttggagagagagggagaggattagaggttgtgatagatgggtaattgctggtttagagggagcttaattgttaacagagtctcttctaatgcgaagccaggtaagtctacagttcttccagccttatcatttagacagatggattatctcttatccctgaaagtcttaaaatctgatgccaagtttgttcaaatccgaattgcaacaaagagaacatccaacactgtaaatttagtccatatttgacccctccgaaagcaataaccatgttctgaaattgatttgctataaaaaaatgtttattcaccttaacatgttctgaaattatttttcccgaatttcatggaaaatatttttttactcaccctcatcatgtctgaaactaatttgccgaatttcgtaacaacctttgttaaatcacttcatcatgctctgaaactaattttcccaatttcatgaaaaccccaaatttgccaaattctgtcaaaaaaaaaggaacagtttatccacctgatcatgttcttgatataccaaagtctctgctgattcctctgagctcgcagagactcccaagatccagagcccatcggagagggaccggagcgacgagagcaagctgccatcgaacgccaaggaggtggaggcgatgcggttggactcgtcggcgcgcaacccgctcgtcgccttctccttcgaggagctcagggcggtcaccagcaacttccgccaggactccctcatcggcggcggccgcttcggccgcgtctacaagggcgccgtcgccgcctccgccgccggcgacggcgacggcgccgagccccagcccgtcgccgtcaaggtccacgacggcgacaacagcttccagggccaccgcgagtggctggtcagtagtactcaatcaagaatcaatctcgttgttcgcgctgtggtgatcggaatccgccattgttggtgcaggcggaggtgatcttcctgggccatctgtcgcaccccaacctggtgaggctcgtcggatactgctgcgagggcgaccaccggctgctcgtctacgagtacatgccacgcggcagcgtcgagtcccacctcttctcccgtaagtccgtcgccgccgccgcaccagaaaattagtttgttggtatcataacgtgtttatcgatgtcaaagtatgttaattatactttgatgatgatattataatatatggataaaaagtttcactgtacgttttaccaaaagtcatcggtgtcgcctgacatcggctattacactattgatcaccggcgtagtacgcgtcgagggtgtgatgactgacgaggttcgctggtgggtgtgcaggggtgatggcgccgctgtcgtgggcgacgcggatgaagatcgcgctgggcgcggcgagggggctcgcgttcctccacgaggccgagaagcctgtcatctaccgcgacttcaagacctccaacatcctcctcgacgaggtgcgggatatctctcgtccaaattccttttttttttcatacttttggtcaagattcactcgaggattcaaaatttggtcggatttcgtctaaattttcgaattcaacgatcctgaaaatttttcagtgtcctttgatgaaacattgctcgagagttcgatttttcggtccaatctcgttgcgaatttcaagataccttttttggggggggtcgaaattcactcgaggattcataatttgattgaatttcgtctaaagttttgaattcaaacaaagcgtgaggatatctcatcgaaaatttttcaaacttttggtcaagattcactcgaggattcaaaaatcggtcgaattccgtccaataattcgaattcaacaaagggcgtttcaaacttttggtcaagattcactcgaggattcaaaaatcggtcgaattccgtccaataattcgaattcaacaaagggcgcgtcgcatcctcaaattgtcaatgctcttgataaaaacattactcgagtctttggtcgaatttcgtttcaagcttctatttttatttattttttttggggggggggtttactccagaattcaaaaaccggttgaatttcgtctaaaatctcgatttcaaacatagtgcgcgtcgcactctcaaattttcaatatcttgataacgcattactcgagaattcaatttccggtcgaatttcgttgcaaacttcaaaaaaaaatcatctctttcttgggtcaaaatttactcgagatttcaaatttcggtcgaatctcgtcaatctaaaccgattttttctgaaaccatttggcgcgaatcgaatgtatggattcatcatcattcaggagttcaacgcgaagctgtcggacttcgggctggcgaaggacgggccggtgggggacaagtcgcacgtgtcgacgcggatcatgggcacctacggctacgcggcgccggagtacgtcatgaccggccacctcacggccatgagcgacgtctacagctacggcgtcgtcctcctcgagctcctcaccggccgcaagtcgctcgacaagtcccgccccccgcgggagcagacgctcgccgactgggcgctccccctcctcacccacaagcgcaaggtcatgtccatcgtcgacccccgcctctccgccgccgccgccgccgccggcgcaggcggcgagctgccggcgagggcggtgcacaaggcggcgatgctggcgtaccactgcctgaaccggaaccccaaggcgaggccgctcatgcgggacatcgtcgcgtcgctcgagccgctgcaggccgacgacgaggcgcgcgacgccgccggcgcctgagaagaagggagagggacgcagatgttgttgggattaattaattaaagctgtatcataatgaaaatcaaaagatttggtagtgcagcaagggggtaggtgtagtgattagcggttgagttgagctgagtgtacgaacgttgttaatgtgcagggaagatgattaattaattaattaattacttaattttctg</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0431900, RefSeq:Os10g0431900