Os02g0712700

From RiceWiki
Revision as of 19:21, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os02g0712700

Description

Concanavalin A-like lectin/glucanase domain containing protein

Version

NM_001054444.1 GI:115448258 GeneID:4330503

Length

3723 bp

Definition

Oryza sativa Japonica Group Os02g0712700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:30406394..30410116

Sequence Coding Region

30406777..30407651,30408674..30410042

Expression

GEO Profiles:Os02g0712700

Genome Context

<gbrowseImage1> name=NC_008395:30406394..30410116 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:30406394..30410116 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggccttcccggccgtcgccaccgcggcgccatggccggccgcgccctcgtcgtgctgctgtggtgcgtgtccgcctccgtgttcctcccctccgcccgcgcgcagaccaccaccttcaccagcgccatcgacggcaagaaggcgaccaccttctccttccccacgttcgacaagtccctgatgcagctcggcgccaacctgaccttctccagcaacgccaccgtcagccagagcgcgctgcaagtcaccccggacagcagcaacaatcctctggactacctcgtcaaccaggccggccgcgtcttcttccccaccccgttcgtcctgtggtcctccaactcgtccaactccaccgccgatggcaagtacgtcgcctccttctccacggtgttcagggccaacctctaccgatcaaacacgaccatgaaaggagaggggctggcgtttgtcatcgcgtccaccaacgccatcaacccgccgccgggcagctacggcgagtatcttggtctcaccaacgcctccaccgacggcaacgccaccaacgggttcgcggccgtggagctggacagcgtgaagcagccctacgacatcgacgacaaccacgtcggcctcgacatcaacggcgtccgctccaacgcctccgcctccctcacccccttcggcatccagctcgcgcccagcaacaccaccactgacgacggcaactacttcgtctgggtcgactacaatggcacgtcgcggcacgtgtgggtgtacatggccaagaacgacaccagaaagccctcgaccccggtgctcgacgcgccgctggacctctccaccgtcctccgcggcaacaagggctacttcggcttctcggcgtccaccggcgagacgtacgagctcaactgcgtgctcatgtggaacatgaccgtcgagatgctccccgacgagggcgccaccaagaagaaggcggccctgcccggatggaagctcggggtggtcgtcggcgtgtcatcctgcgccgtcgccgtggtgctcgggctgttcgccgcgctgtacatccggaagaggaggaagaggatcggggacgacccgagctccgtgttcaacaccaccattgatttcaggagcatcccgggtgtgccaagggagttcgattacagggagctaaggagagggaccaacaacttcgacgagaagatgaagctcgggcagggcggctacggcgtggtctaccgcgccaccgtcgttggggagaacggccagaacatggaggtcgccgtgaagcagttctccggtgccaacaccaaggggcaggaggatttcctcgccgagctcagcatcatcaaccgcctccggcaccgtaatctcgtcaagctcgtcggttggtgccaccaaaatggcgtcttgttgctggtgtacgactacatgccgaacggtagcctggacacgcacctcttcggcgggccggagtcggaggtgctgaactggcagcagcgctacaacgtcgtcaccggcgtcgcgtcggcgctgaactacctccaccacgagtacgaccagatggtgatccaccgcgacatcaagccgtccaacgtcatgctcgactccgccttcaacgcgcggctcggcgacttcggcctcgcccgcgcgctcgagtccgacaagacgtcgtacaccgacatcatcggcgtcccggggacgctggggtacatcgcgccggagtgcttccacaccggccgcgcgacgcgggagtcggacgtgttcggcttcggcgccgtcatcctggagatcgtctgcggccgccgcatctcctgcagcaaccccgccgggtgcagccagctgctggaggccgtgtggaagctccacggcgcggcgggcggcggcggcggcggcggccgcatcctcgaggccgtcgaccagaggctcgccggcgagttcgacgaggccgaggccgagcggctcctgctgctgggcctcgcgtgcagccacccgaaccccggggagcggccgaggacgcagaccatcctgcagatcctgacgggcgccgccccgccgccgcacgttccgccgtcgaagccggcgttcatgtggcccgcgatgcccgtcgcgctcgatggcgacgacgacgacgagacgtcgcgcagcagcacggtgatgaactcgtcgtcgtcgtactacgtgtcctcgtcgggttggacccagaactaccaggtcagcaaggagcacgaggtggcggacagggacgtggcgacggtgtga</cdnaseq>

Protein Sequence

<aaseq>MGLPGRRHRGAMAGRALVVLLWCVSASVFLPSARAQTTTFTSAI DGKKATTFSFPTFDKSLMQLGANLTFSSNATVSQSALQVTPDSSNNPLDYLVNQAGRV FFPTPFVLWSSNSSNSTADGKYVASFSTVFRANLYRSNTTMKGEGLAFVIASTNAINP PPGSYGEYLGLTNASTDGNATNGFAAVELDSVKQPYDIDDNHVGLDINGVRSNASASL TPFGIQLAPSNTTTDDGNYFVWVDYNGTSRHVWVYMAKNDTRKPSTPVLDAPLDLSTV LRGNKGYFGFSASTGETYELNCVLMWNMTVEMLPDEGATKKKAALPGWKLGVVVGVSS CAVAVVLGLFAALYIRKRRKRIGDDPSSVFNTTIDFRSIPGVPREFDYRELRRGTNNF DEKMKLGQGGYGVVYRATVVGENGQNMEVAVKQFSGANTKGQEDFLAELSIINRLRHR NLVKLVGWCHQNGVLLLVYDYMPNGSLDTHLFGGPESEVLNWQQRYNVVTGVASALNY LHHEYDQMVIHRDIKPSNVMLDSAFNARLGDFGLARALESDKTSYTDIIGVPGTLGYI APECFHTGRATRESDVFGFGAVILEIVCGRRISCSNPAGCSQLLEAVWKLHGAAGGGG GGGRILEAVDQRLAGEFDEAEAERLLLLGLACSHPNPGERPRTQTILQILTGAAPPPH VPPSKPAFMWPAMPVALDGDDDDETSRSSTVMNSSSSYYVSSSGWTQNYQVSKEHEVA DRDVATV</aaseq>

Gene Sequence

<dnaseqindica>2466..3340#75..1443#ccccttgctacatcaccaacccccacccttttctccatttcgtggccaactcctccgcagacctgcccttccgtatgggccttcccggccgtcgccaccgcggcgccatggccggccgcgccctcgtcgtgctgctgtggtgcgtgtccgcctccgtgttcctcccctccgcccgcgcgcagaccaccaccttcaccagcgccatcgacggcaagaaggcgaccaccttctccttccccacgttcgacaagtccctgatgcagctcggcgccaacctgaccttctccagcaacgccaccgtcagccagagcgcgctgcaagtcaccccggacagcagcaacaatcctctggactacctcgtcaaccaggccggccgcgtcttcttccccaccccgttcgtcctgtggtcctccaactcgtccaactccaccgccgatggcaagtacgtcgcctccttctccacggtgttcagggccaacctctaccgatcaaacacgaccatgaaaggagaggggctggcgtttgtcatcgcgtccaccaacgccatcaacccgccgccgggcagctacggcgagtatcttggtctcaccaacgcctccaccgacggcaacgccaccaacgggttcgcggccgtggagctggacagcgtgaagcagccctacgacatcgacgacaaccacgtcggcctcgacatcaacggcgtccgctccaacgcctccgcctccctcacccccttcggcatccagctcgcgcccagcaacaccaccactgacgacggcaactacttcgtctgggtcgactacaatggcacgtcgcggcacgtgtgggtgtacatggccaagaacgacaccagaaagccctcgaccccggtgctcgacgcgccgctggacctctccaccgtcctccgcggcaacaagggctacttcggcttctcggcgtccaccggcgagacgtacgagctcaactgcgtgctcatgtggaacatgaccgtcgagatgctccccgacgagggcgccaccaagaagaaggcggccctgcccggatggaagctcggggtggtcgtcggcgtgtcatcctgcgccgtcgccgtggtgctcgggctgttcgccgcgctgtacatccggaagaggaggaagaggatcggggacgacccgagctccgtgttcaacaccaccattgatttcaggagcatcccgggtgtgccaagggagttcgattacagggagctaaggagagggaccaacaacttcgacgagaagatgaagctcgggcagggcggctacggcgtggtctaccgcgccaccgtcgttggggagaacggccagaacatggaggtcgccgtgaagcagttctccggtgccaacaccaaggggcaggaggatttcctcgccgagctcagcatcatcaaccgcctccggcaccgtaatctcgtcaagctcgtcggtaagctctactacttttctgaacattcaaatcttagctcgatattgtttatgtttttgttcgatgcatgatagtatctttttgtgatttagtgattaagaatagctgagtaggacattgatgccgccctgatgaactgctaatttcgtgatgaaatatttcctcaagaacatcaccttaataaatgccaacccaaatcgccagattatcttttgatttgatttgatttgaaatattttcgcttttattgaaatggatgctccgataagtttagactttgtactttgtacttgttattagaccgcgtagatgttgtctactcgtgccaatttttaactgttacattctcagcaacaatttccttcgtacggttgcgtgaaaatgaaagcttccgagttccgagccgtcggaaatttcagtagccgtctgagaatagacaaaagtaagcaatttttcatacccacaatcacatgaaaacgatacaccacgacaacgattactgcctttatctcaagaaaagtagcagataaaattctaagataattacacacaacagatgtactagtagatatttttagcagctcagcacgccacatggcaacttggcacctaagttcaaaattaaacactgaccagttcccaccgattaccgagcggattggatcatggccaatacaggttggatcaaggcaaaggtttgacatcgttttgtcgcttgcattgttgttcggagaaaaatatttggtacggagtagttgtagaacggtctgtataccttgcaacactaattaagccttttttttaaggaaatcctattaatttttttaatcttgagaataaccacttgtctctgacttgaataattgggtcattgacaaaaccaacatgattcattctacgtttttcacgtttcaaaaataatacacaattctatctcttgggataagcattcaatattgataataagctagtggtgtaccaaaatacacaatcctaaaatattttggacgacctgtctgcaggttggtgccaccaaaatggcgtcttgttgctggtgtacgactacatgccgaacggtagcctggacacgcacctcttcggcgggccggagtcggaggtgctgaactggcagcagcgctacaacgtcgtcaccggcgtcgcgtcggcgctgaactacctccaccacgagtacgaccagatggtgatccaccgcgacatcaagccgtccaacgtcatgctcgactccgccttcaacgcgcggctcggcgacttcggcctcgcccgcgcgctcgagtccgacaagacgtcgtacaccgacatcatcggcgtcccggggacgctggggtacatcgcgccggagtgcttccacaccggccgcgcgacgcgggagtcggacgtgttcggcttcggcgccgtcatcctggagatcgtctgcggccgccgcatctcctgcagcaaccccgccgggtgcagccagctgctggaggccgtgtggaagctccacggcgcggcgggcggcggcggcggcggcggccgcatcctcgaggccgtcgaccagaggctcgccggcgagttcgacgaggccgaggccgagcggctcctgctgctgggcctcgcgtgcagccacccgaaccccggggagcggccgaggacgcagaccatcctgcagatcctgacgggcgccgccccgccgccgcacgttccgccgtcgaagccggcgttcatgtggcccgcgatgcccgtcgcgctcgatggcgacgacgacgacgagacgtcgcgcagcagcacggtgatgaactcgtcgtcgtcgtactacgtgtcctcgtcgggttggacccagaactaccaggtcagcaaggagcacgaggtggcggacagggacgtggcgacggtgtgaccgtagacgagtccacggcccacacgtgcggccgggacccgacccatcgcatcggatttggcacgttaccgtggagttggtgacaacgttgagaacaaagatgggacggatgaaaggtgtaaataatgtccatgaatatgctatcgagctttccatttgttttttttgctctgggagcttctttagtacagtggagtacaagactactggtgtttagatttgtttcattttcttcatactttgatgtcaagctgtaatgttctcaattggtgtaacaatggtggcttgatcacttccaaatagcggaatgtgtaagcattagtcatgataggcgattgctccttatactcgcgtgcaacatgttcctctttgcgttcgatcct</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0712700, RefSeq:Os02g0712700