Os02g0814100

From RiceWiki
Revision as of 19:25, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os02g0814100

Description

Lecithin:cholesterol acyltransferase family protein

Version

NM_001055024.1 GI:115449532 GeneID:4331116

Length

5596 bp

Definition

Oryza sativa Japonica Group Os02g0814100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:35769688..35775283

Sequence Coding Region

35769688..35769710,35770305..35770409,35770682..35770850,35771013..35771084,35771156..35771239
,35771587..35771685,35771784..35771883,35772072..35772246,35772353..35772566
,35773095..35773171,35773247..35773416,35773961..35773997,35774356..35774491
,35775026..35775283

Expression

GEO Profiles:Os02g0814100

Genome Context

<gbrowseImage1> name=NC_008395:35769688..35775283 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:35769688..35775283 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcctcggcggcggctccggcgcggggacctcgcctgttcggtggcggtggcggtggcggtggcggcggtggcggtggcggccgtgggggcggtgggcggaggcgatggcggcgcggatttcgactaccggaagctctcggggataataatccccgggttcgcgtcgacgcagctgcgcgcgtggtctgtgctggattgcccctactcgcccttcgacttcaaccccctcgactccgtctggctcgacaccgccaagctcttatctgctgtcaattgctggctcaaatgcatgctgctcgacccttacaaccagacggatcatccagagtgcaagtcaaggcctgacagtggtctttctgcaattacagagttagaccctggttatataactggtcctctttcttcagtgtggaaagaatgggtcaaatggttaacttttgaaactgcattgaaacttcgaggagggccttctttagtgtttgctcattccatgggtaataatgtgtttcgctactttctggaatggttgaaactagaaatcgctcccaagcattacatccgatggcttgacgaacatatacatgcatactttgcagttggtgcacctcttcttggttctactgaagcagttaaagctgctctttctggagcaacatttggtcttccagtcagcgagggaacagcacgattgatgtttaatgcatttggttcatctttatggctcatgcccttctcagaatattgcaaagctgataatatatactggaagcatttctttgagggaaagggaggttgccaccacagacagcaatgtgatgaaatggaatataagtctgaatactcaggatggcccacaaaccttgtcagcatcgaggttcctacagttcgagatacggaagcatacccatccattatggatacaactgagaacataacatccagcatggagtgtggaaagccaactcttttgtcattttctgctagggaggtttcagatggtactctgtttaaaaccataaaggattgggaccctcagagcatagggcttatccatcagcttgagaagtactaccagggtgatccagttcttaatcccctcacaccctgggagagacccccaataaagaatgtgttctgcatatatgggcttgattcaaagactgaggtaggctattattttgcaccgagtggaaaaccatatccagataactggataataactgatattatttatgaatttgaagggtctctactatcaaggcagaataaaatagtaacacaatttattctttccagatcaggtaattctgttactggaaagcccaacaattccagcggagacggaacggtatcctacaattctctctcatggtgcaagaactggcttgggccaaaagtgaacataactagggctccgcaggcagaacatgatggatctgatttacaaacaaagatgaatgtcgaccaccatgtaggccagggcatactcccaaacatgacgaggactccacatgtgaagtacataacctactttgaagatgctgagagcattccgggatggagaacagccgtctgggagcttgataaagcaaatcacaggaacattgttaggatgccagtactgatgcgtgagttgtggcttgaaatgtggcatgacatgcaccctgatgcgaaatcaaaatttgtgacgaaagataagctgatggatactgattga</cdnaseq>

Protein Sequence

<aaseq>MPRRRLRRGDLACSVAVAVAVAAVAVAAVGAVGGGDGGADFDYR KLSGIIIPGFASTQLRAWSVLDCPYSPFDFNPLDSVWLDTAKLLSAVNCWLKCMLLDP YNQTDHPECKSRPDSGLSAITELDPGYITGPLSSVWKEWVKWLTFETALKLRGGPSLV FAHSMGNNVFRYFLEWLKLEIAPKHYIRWLDEHIHAYFAVGAPLLGSTEAVKAALSGA TFGLPVSEGTARLMFNAFGSSLWLMPFSEYCKADNIYWKHFFEGKGGCHHRQQCDEME YKSEYSGWPTNLVSIEVPTVRDTEAYPSIMDTTENITSSMECGKPTLLSFSAREVSDG TLFKTIKDWDPQSIGLIHQLEKYYQGDPVLNPLTPWERPPIKNVFCIYGLDSKTEVGY YFAPSGKPYPDNWIITDIIYEFEGSLLSRQNKIVTQFILSRSGNSVTGKPNNSSGDGT VSYNSLSWCKNWLGPKVNITRAPQAEHDGSDLQTKMNVDHHVGQGILPNMTRTPHVKY ITYFEDAESIPGWRTAVWELDKANHRNIVRMPVLMRELWLEMWHDMHPDAKSKFVTKD KLMDTD</aaseq>

Gene Sequence

<dnaseqindica>5574..5596#4875..4979#4434..4602#4200..4271#4045..4128#3599..3697#3401..3500#3038..3212#2718..2931#2113..2189#1868..2037#1287..1323#793..928#1..258#atgcctcggcggcggctccggcgcggggacctcgcctgttcggtggcggtggcggtggcggtggcggcggtggcggtggcggccgtgggggcggtgggcggaggcgatggcggcgcggatttcgactaccggaagctctcggggataataatccccgggttcgcgtcgacgcagctgcgcgcgtggtctgtgctggattgcccctactcgcccttcgacttcaaccccctcgactccgtctggctcgacaccgccaaggtcagaaccacccctcgttccgtactgtcctcctgatattcagaaagctacttttgctagtaactgttgttgttctggataatatatgtgcttttgttcttttattaggattcgttggtctgttcttgtgaggcattgatggattaaagtaattttgcaatggcccatcaggcagatgcgtgtgtgcgactgcacatctgcttgatttgagtgaccatctagttataggttttggaagtgtttttaggactaaatcggttgtgtgtactacgtaaccatgctaaaactagtgacacgttcagttagaagaggtttgtcattacttcactggaaaagggatatttgttaattgtgtgatggttgggactgtttcctgtaaggcgtcatacggcttaattgggtgaggttgttacagaagcattcaatctgtgcaatgaacaggctgtaacgattatatttgttacatgtagggggtcatatttaagtattatctttcattttcatacttgcgacttaatcgggttcatggtgcagctcttatctgctgtcaattgctggctcaaatgcatgctgctcgacccttacaaccagacggatcatccagagtgcaagtcaaggcctgacagtggtctttctgcaattacagagttagaccctggttatataactggtaaattatatgcctcgcttaattctccttggtattgattggattattgaattttgagtacaaatatgctgcacgattcatcagcaatgtgatagattgtgatttatgcttcaactcccatgcaatggaaaaaaaaaaccatcgatggcaagtgagagtgataaaatttgacatcaagcttttgtgagttaataatggatattgccatgagaataatagcattagctaggttacattgcaaattcatgttcatcggtaagctgtagaattccccatctcgttcctcaaagaataaaaaaatgattagccataaaaaaaatctttcttactaatttggttttattggccaagttttcaggtcctctttcttcagtgtggaaagaatgggtcaaatggtgtgtagaatttggtattgaagctaatgccattatcgcggttccatacgattggaggctgcccccttcgatgcttgaggagagggatctgtacttccataaattaaagtttgtaacacttcacttcatatcacatagcaatcaatttactcactgcccattggctttcgatagtatttgatgttattactaataattggtgtaaaaacacttctaaattgtatcaaccagaatatactcactttgtttaccttccataccctcaaaaaatcacgcataactaagtagtactagtatcagaaatacaaaggtttggttgcctttggtgtgcatgcaagctgaaattgataattttttttgcgggggaaattgataagcttttacttgcttcttttcatttttttatgacatccttttcacttgaattaaaagttgttttcttcaagtttatacaatacttgataatgacacggcgatatgtcggaaattcattgttgcatgcggaaagatagtattttggtgctcatagtccttttaactgcaggttaacttttgaaactgcattgaaacttcgaggagggccttctttagtgtttgctcattccatgggtaataatgtgtttcgctactttctggaatggttgaaactagaaatcgctcccaagcattacatccgatggcttgacgaacatatacatgcatactttgcagttggtatgtaaaccagaaggaatttaattcatcaccatcgttatttgttagtgtcatgccatttttccttgctttcaggtgcacctcttcttggttctactgaagcagttaaagctgctctttctggagcaacatttggtcttccagtcagcgaggtcagcctttatgaattatatatttttcaataatgtgtcctctgccctcaggaggctatatttctgatatttatacatttttcctccaacattgttagtgttgaatttaagtatgttgttggttgtccaatactgaatagtttttatttcctttttggattcactaggttttgtggtgattcttttgccccttgttctttgtccctgccctttctgagagtactgttctggtaacctctcagcccttctacacgtgcaagggaaccttttagtactgttggagtcttggagacaacaatgccttacttctcatagccgattcgcacggccaggttgtgtgccacaaccatgctagttttagagtcagttagggaggttgttttggtgcatgtataaattctctaccttcgagtgatacacatgtgttgaatctgtacttagctatatattgccaaaattgttacattatatgccatcttataattatattgtctcttatgcatctaaaattgcttttattgttttcagggaacagcacgattgatgtttaatgcatttggttcatctttatggctcatgcccttctcagaatattgcaaagctgataatatatactggaagcatttctttgagggaaagggaggttgccaccacagacagcaatgtgatgaaatggaatataagtctgaatactcaggatggcccacaaaccttgtcagcatcgaggttcctacagttcgaggttctttgttgaaatttcttcccagctttaatctatgattaagattttgcttccactgagcaggtctaccttttcttttctttcattttctgttttcctctggcagatacggaagcatacccatccattatggatacaactgagaacataacatccagcatggagtgtggaaagccaactcttttgtcattttctgctagggaggtttcagatggtactctgtttaaaaccataaaggattgggaccctcagagcatagggcttatccatcagcttgagaagtgagtttgcaattttgtatgcgccagtgctgctactttgtaaattgtaattctcagtttcacatacatatttatcttcaaagtaaaccaccaacttacatgtttttatatgcttatggaagtaaatatgtgtgattttgattaaattgtatctaatacccccacattttgatctttgttgatctcaggtactaccagggtgatccagttcttaatcccctcacaccctgggagagacccccaataaagaatgtgttctgcatatatgggcttgattcaaagactgaggtatgattgggatttttctttgattgttaaagtttctactttagcctgctttgaaccacattaccattcaccgatttatggccttttttgttaagcaggtaggctattattttgcaccgagtggaaaaccatatccagataactggataataactgatattatttatgaatttgaagggtctctactatcaaggcaggtatcatgcatcttgtgttggaaagtctcgtgtccaattctttcaaattatccattatctgtctttatgtatgtctgcttctagtgtagtttcctggaacagtatttttttttgctttaatatgaaaagatatttgtagttcgcagactcatttttcatggctaatttgattgaatgaagatcctagtaagttgcactggtttctaatggtaattaccacagataatagcttttcgtgcatttgttttctcgaaaaatactgacctttgaacctttggcttttgatgagttcaattctggtttggacaactgtttatctggccacatttttatgtcttttgttttagaataaaatagtaacacaatttattctttccagatcaggtaattctgttactggaaagcccaacaattccagcggagacggaacggtatgttctactgtagtatctttataggtcaattcaatgtcttgagttgaacaaacaagactttgtggcaggtatcctacaattctctctcatggtgcaagaactggcttgggccaaaagtgaacataactagggctccgcaggtattttaccatgtgcctagtgatatgatcctcagcagaggagtttgaggcctgtttattaatttgttttgttgtggctaatagaattattgactgtttccttgtagcatatcacaatgttaatgtgcctttcctgctttgtacatcctactgtttttgcaggcagaacatgatggatctgatttacaaacaaagatgaatgtcgaccaccatgtaggccagggcatactcccaaacatgacgaggactccacatgtgaagtacataacctactttgaagatgctgagagcattccgggatggagaacagccgtctgggagcttgataaaggtgggtgcaaatcttttagttgttttttctccatttttttcatatttatgtcgtaatgtttgtccttatgccagctttatgcatttctttgctacaagggaataagaaatccatgtagaagtttatgcttagaatatacatatatttacagtgattcaggcggagtacttgtgcgtgtgcccacatactccagatttaacatgcaaccccctctaaagtttaatcattcctttgctatacaacactcattttgaaaattattattttaacagcaaatcacaggaacattgttaggatgccagtactgatgcgtgagttgtggcttgaaatgtggcatgacatgcaccctgatgcgaaatcaaaatttgtgacgaaaggtgtgctcagtttcaactcctattaccagatatatgaatccccctgcatctgatttgactttcaaagccactaacagaggtgcatgaacagctttccgaggtccattgagaaatgacgattgtcactgggactatgcaaaagctcgatgtggctttccagaacactgtgaatacaggtctgcaactcatctttcattccctttttcttgctattatcctttttcattaacattgaattttatggtgaccatatgccaggtacacttttggtgatgtccatctaggaatgagttgcaagctgaaaaattcgtcgactaacctcctgcaacaatatctctgaagtatgtgcccttcaatttaatgacgtttggtgttttacggtattctaaggctctaacttgtactgctgtattgtggtgcagaattcttttggatcatttttatggttatgatattattcagttggactgaaccaaggacaaaaaaagggtccagtcagaaacaggtgagcatgtattgttgctcttatagtcatcatgattatcatcttggctagtagttgatatattctgttttctttttctctttttgaagataagctgatggatactgattga</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0814100, RefSeq:Os02g0814100