Os01g0102950

From RiceWiki
Revision as of 18:42, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os01g0102950

Description

Snf7 family protein

Version

NM_001185188.1 GI:297719510 GeneID:9266052

Length

2347 bp

Definition

Oryza sativa Japonica Group Os01g0102950, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:169798..172144

Sequence Coding Region

170045..170095,170406..170554,170764..170875,171398..171469,171578..171671
,171770..171921,172004..172072

Expression

GEO Profiles:Os01g0102950

Genome Context

<gbrowseImage1> name=NC_008394:169798..172144 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:169798..172144 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaagaagatctttggagccaagaagagcaaggacccgcccccatccatccaggacgctaccgaacgaatcaacaagaggggggagagcgtggacgacaagatcaagaagctggacgaagagctcggccgttacaaggagcagatcaggaagacacgccctggaccctcccaggacgccattaaggcccgcgccatcaggcttctcaagcacaagcgcatgtacgaagaacagcgcaacatgctctacaaccagacctataatctcgaccaagtcgctttcgctgccgatggcctcaaagacgctcagcagaccatgaatgccatgaaggccgccaataaagagctcaagggaatgatgaagacagtcaagattgaggacatcgataatatgcaagatgaaatgactgacctgatggatgtgagcaacgaaatacaagaatcccttggtagaagctacaacatccctgacgatgttgatgaggaagaactaatgggagaactggatgctttggaggctgatatggagtttgagtcaagtgcagtcccatcgtatcttcaaccagacaaggaatccgatttcgatgcagagcttaatttgccagctgcacctaccgctcctgcagcagtcccagtaagcaggcagcaggtggatgagctaggattgccagcagtccctcgagcatcaatccgcagttag</cdnaseq>

Protein Sequence

<aaseq>MKKIFGAKKSKDPPPSIQDATERINKRGESVDDKIKKLDEELGR YKEQIRKTRPGPSQDAIKARAIRLLKHKRMYEEQRNMLYNQTYNLDQVAFAADGLKDA QQTMNAMKAANKELKGMMKTVKIEDIDNMQDEMTDLMDVSNEIQESLGRSYNIPDDVD EEELMGELDALEADMEFESSAVPSYLQPDKESDFDAELNLPAAPTAPAAVPVSRQQVD ELGLPAVPRASIRS</aaseq>

Gene Sequence

<dnaseqindica>2050..2100#1591..1739#1270..1381#676..747#474..567#224..375#73..141#actcccaacactctctctcctcgctgccgctgccgccgccgccgccgccgccgccgcacacacgcgccggaaatgaagaagatctttggagccaagaagagcaaggacccgcccccatccatccaggacgctaccgaacgagtattctcctcgtctaggccatttgctcgcacgccatctctcttagtttgaacatttcctctctatgtgtatgtgattgaagatcaacaagaggggggagagcgtggacgacaagatcaagaagctggacgaagagctcggccgttacaaggagcagatcaggaagacacgccctggaccctcccaggacgccattaaggcccgcgccatcaggcttctcaagcacaagcgcatgtactctactctactcttactcactattctactactagtagagtatttgctactactccactatgcaactctgatgaatgtacgttgcctgtttcaaggtacgaagaacagcgcaacatgctctacaaccagacctataatctcgaccaagtcgctttcgctgccgatggcctcaaagacgctcagcagaccgtacgtactactccacatatatagcccgccttgtttgttcctactgtctccatgtctatgaattattgccgaaccattcttttgtttgttaatttatcgattcctcagatgaatgccatgaaggccgccaataaagagctcaagggaatgatgaagacagtcaagattgaggacatcgatgtatgcttctctttctctttagttgctacttactacagctaccttaccaagatattccttcctcatgtgcatttctttatcaggtgctaccatttgagctgtccccatcctgtgttttgtatcatgcccattccttgaaaaaaacttgctgtcaaatcttttcttttttatatattgaaagggaaaaacctgcttatagatttttcataaccatgcaaacagaccaattgttctctcaaggacaattgctccagtgcagatattttattgggcattgcattcctagtttcagacgctatccttcattacatttcaagctaatctgcaggatttgcctattgtttagatcatcaacacattttacaccagtatatccattgatttacaagaaaaccatacaaaaaccacaattgtcaatcttttttaagtgcggttatcaaccgcccttgaaattgcttgttggactatcttgagtattatcatcttttttcgcgtaaaacgaatgccctgatccacctgtagaatatgcaagatgaaatgactgacctgatggatgtgagcaacgaaatacaagaatcccttggtagaagctacaacatccctgacgatgttgatgaggaagaactaatgggaggtatggacgctgtaccatcagttggccaattggaaaatgatggttggcaatttacttggcattattgtcattcataggcatctggaagtaataacatagattcatgccataaattgcctagcttgttgccatgccttcattcttcctgggaccattgcagggctggagataataatctatctactgtcgttgtttcttgaacattgcagaactggatgctttggaggctgatatggagtttgagtcaagtgcagtcccatcgtatcttcaaccagacaaggaatccgatttcgatgcagagcttaatttgccagctgcacctaccgctcctgcagcagtcccagtaagcaggcagcaggttagtttatattattgttatttttattcagatgcttgctttgtcatgatgattcgagaactatctagtcccatgtatgtactagaggaatgaatgatgaattttcctttccttttttcttaagaagttgttattcatgagttagcagtgtctgttgttcactatcccaagttcaaatattcttgcatagactaggtgcattgttgatcaacagctaaaacaaccatgttttgtatgaaccaattagattggtccgtagtttacctgttttaagcttgtactgaatgttgcctggtgctatctggtgcaggtggatgagctaggattgccagcagtccctcgagcatcaatccgcagttagaacagtaattcatgtacctttgcttgtgattggcattgacgtgagaacccattgctatgcaattgcagttgaacaattaatctgtgtatgtgtttctcttcatgagtcgccttgatttgttaaaccgagcttgcagtcttatatcttccactctgccttttagaaaaggggatttcgagttgtgatgggttgaggttgattagatgcatcatatgatgctttgtcggtggtggtggttctttcaatt</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0102950, RefSeq:Os01g0102950