Os01g0109700
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Contents
Annotated Information
Function
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Expression
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Evolution
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References
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Structured Information
| Gene Name |
Os01g0109700 |
|---|---|
| Description |
Similar to Paired amphipathic helix protein SIN3 |
| Version |
NM_001048330.1 GI:115434073 GeneID:4326133 |
| Length |
8559 bp |
| Definition |
Oryza sativa Japonica Group Os01g0109700, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 1:512890..521448 |
| Sequence Coding Region |
513578..513730,513809..513920,514000..514163,514369..514521,514598..514736 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008394:512890..521448 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008394:512890..521448 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>gtcatgcgcgatttcaagagtgagaggattgataccaacggagtcattattcgtgtcaagacactcttcaacgggtaccctgagctcatccttggcttcaataccttcttgcccaagggttatgcaatcaagctgcaggaggagaagaagcctgttgatttcgtggaagccatcaatttcgtaaacaagattaagaatcggttccagcatgatgagcatgtctataaggcattcttagacatcctcaacatgtaccgcaaggacaataaatccatccaagatgtttaccatgaggttgctgtgttgtttgcagaccacaaagatttactcgaagagttccaacacttcttgcctgatacctccgtgcctccacaagctgtggccccttcaaggcctggtattaggcgggatgacaggacctctctggtgcctcctgctagtaggaatgaaaagagggataaggctcatccacatgctgaccgtgagagtgttgatcgtcctgatctggaccatgttatccagcgaagacgccctaaggataggcatgattatgatagaggcgataaggatggtgaacttgacagcaaagatcttgatataggacttaagcgcaaaccttttccaaggaagatggaggaccctaccagtgctgatgcacaccatggagggcccctggaaaatcacggaatacttggtgcatctgcttcattatatgataataaagatgcacttaagagtgtatacacgcaggagttccatttctgcgaaaaagtgaaggagaagctggagcatgatgcttaccaggagtttttgaaatgtcttcacatatacagccaggaaattattactaggagtgaattgaagaacttggtgaatgatatacttcagcagcatccagatcttatggatgggtttaatgaattcttggagcactgtgagaatatagatggttttctggctggtgtcttcagtaaaaggcaaactggacgaattgttaaaactgaggaaaggaaagagggaggaaagggaacagaaaaagaaccggacagaatcgagaaagtaccagcatataaggaagctcctagccaaaaacctgtgttctctagcaaagaaaagtatatatacaaacctgtatcagagctcgatctttcaaattgtcagcggtgcactccaagttaccggcttctacctaaacattacccaatgcctcccgcaggcaacaagactgagcttggagcttcagtgcttaacgatcactgggtatcagtgacatcaggaagtgaagactattcatttaagcacatgagaaagaatcagtacgaagagagtttatttagatgtgaagatgacagatttgagttggacatgctgttggaatcagttaatgcagcaactaagcgtgtcgaagagttgatagaaaagatgcaagacaactccctaaaaccagatagcccaatacgcatcgatgagcatttaactcctttgaatctgaggtgcattgaacggttatatggtgaccatggtctggatgtgatggatgtccttcgaaagaacgctagtgttgctctaccagtcatcttaactaggcttaaacagaagcaggaagaatggtcaaggtgccgatcagatttcaacaaggtttgggcagagatatatgccaaaaattatcacaagtctcttgaccaccgcagtttctatttcaaacagcaagatacaaagaacctgagcacaaaatctctattaactgagatcaaagaaattaatgagaagaaaagaaaggaagatgatgtgctccttgctattgctgctggaaataggcgtccaatagttcccaatatgtcatttgactatgtagattcaaacatccatgaagatatgtataagatcattaagtactcctgtggtgaagtctgcagttcctcagaccaactggacaaagttgtgagaatttggacaacttttctggagccaattttgggtgttcagcctcggacacatggtgctgaggatgcagatgcagtcaaacccaagagtcgaaccacaaagtctggtcttgcaactgttggggaaatcaacactactgcagcaggggctgttgccaagcatggccatgatgaaaatattccacaggagcaaacaccgtcatctctggctagaatggtgaatggagtagcaacagatactcaaaatggtttccatgatgttgatcgaactgctcgtagggctgaggaaccatcgaatactgccgtaaatggaagagtgcaaggtgcttcccctggaactaatgaaattcccgctgttagtacccaaaacatgcctaccgagaggtctgcagagaacattcctgttgctaggactgaacagcatggcaatgctaaagcaaatttggaaccaacatcaggtgtgaatgcttctagaagttctcatgctggaaatgacactgctgctgaagcccgggctggaaatgaaacattaccatcagtagagggtggagaaacagggaggtcaggatcaactttaaatggtggaggtgcaagtgagggtaacaaagggcgcctattcaatgaagcttctgcatcccacaataccccaaaagttgaaagagaagagggtgaattatctcctaatggggattttgaagaggacaattttgcgccttttgaagatggagctgtagatggagtatctaaagcgaaggaaggttccacaagcagaccattccagggtaggtctggagaagcacaaccatcttgtgctgaagcagctggtgagaatgatgctgatgctgatgatgagggtgaggaaagcgcacaaaggtctaccgaggacagtgagaatgcctccgagggtggtgaagatgcatcaggaagtgaatctggtgatggtgaggagtgctctcgtgaagatcatgatgaggaagaggaagatatggatcatgatgatcaggatgccaaggctgaaagtgagggtgaggcagaaggaacaactgagacacatgatgtggaagggggaatatcactcccgctatcggaacgctttctacactccgtaaaaccacttgccaagcatgtacccacagctttacatgaccgagatgaaaagtcctcgcgtatattttatgggaatgattcattttatgtactgttcaggctgcatcagatcttgtacgaaagattactttcggctaagacaaactcatccagtgctgaaaagaaatggagaacttccaaggatacaaacccacctgacctatatgcaaagtttataagtgcactttacaacttgctcgatggttcttcggataataccaagtttgaggatgactgccgttctatcattggtactcagtcctatgttctgtttactttggataaactgatatataaagttgtgaagcagcttcaagctatagcaacagatgaaatggacaacaagcttctccagctttatttatatgaaaaatcaagatcccctgggaggttctttgatctagtctatcatgaaaatgcacgcgtgctcctccatgaagagagcatataccggtttgaatgttgctcaaatcctacaaaattgtctattcagctgatggaatatggccatgaaaagcctgaagtgactgcagtatcaattgatcccaatttttcctcgtatctttttaacgagtatttgtcgagtatgtcagacagaaaattgtctgagggtgtcttcctggaaaggaataagcggaagcattcaaataacgacgagccttcagattcgttgaaggccatggatggtgtcaaagtcgctaatggccttgaatgcaagatatcatgcaagacctctaaggtctcatatgtccttgacactgaagatttcttatttcgattgagaaagaggaggagattttcacctgttggaaatgtgcctgagaagctgcaggcttcaaaaacatatgctgcgaaagtgcagcgcttccatagatttctatccaagccttag</cdnaseq> |
| Protein Sequence |
<aaseq>VMRDFKSERIDTNGVIIRVKTLFNGYPELILGFNTFLPKGYAIK LQEEKKPVDFVEAINFVNKIKNRFQHDEHVYKAFLDILNMYRKDNKSIQDVYHEVAVL FADHKDLLEEFQHFLPDTSVPPQAVAPSRPGIRRDDRTSLVPPASRNEKRDKAHPHAD RESVDRPDLDHVIQRRRPKDRHDYDRGDKDGELDSKDLDIGLKRKPFPRKMEDPTSAD AHHGGPLENHGILGASASLYDNKDALKSVYTQEFHFCEKVKEKLEHDAYQEFLKCLHI YSQEIITRSELKNLVNDILQQHPDLMDGFNEFLEHCENIDGFLAGVFSKRQTGRIVKT EERKEGGKGTEKEPDRIEKVPAYKEAPSQKPVFSSKEKYIYKPVSELDLSNCQRCTPS YRLLPKHYPMPPAGNKTELGASVLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDD RFELDMLLESVNAATKRVEELIEKMQDNSLKPDSPIRIDEHLTPLNLRCIERLYGDHG LDVMDVLRKNASVALPVILTRLKQKQEEWSRCRSDFNKVWAEIYAKNYHKSLDHRSFY FKQQDTKNLSTKSLLTEIKEINEKKRKEDDVLLAIAAGNRRPIVPNMSFDYVDSNIHE DMYKIIKYSCGEVCSSSDQLDKVVRIWTTFLEPILGVQPRTHGAEDADAVKPKSRTTK SGLATVGEINTTAAGAVAKHGHDENIPQEQTPSSLARMVNGVATDTQNGFHDVDRTAR RAEEPSNTAVNGRVQGASPGTNEIPAVSTQNMPTERSAENIPVARTEQHGNAKANLEP TSGVNASRSSHAGNDTAAEARAGNETLPSVEGGETGRSGSTLNGGGASEGNKGRLFNE ASASHNTPKVEREEGELSPNGDFEEDNFAPFEDGAVDGVSKAKEGSTSRPFQGRSGEA QPSCAEAAGENDADADDEGEESAQRSTEDSENASEGGEDASGSESGDGEECSREDHDE EEEDMDHDDQDAKAESEGEAEGTTETHDVEGGISLPLSERFLHSVKPLAKHVPTALHD RDEKSSRIFYGNDSFYVLFRLHQILYERLLSAKTNSSSAEKKWRTSKDTNPPDLYAKF ISALYNLLDGSSDNTKFEDDCRSIIGTQSYVLFTLDKLIYKVVKQLQAIATDEMDNKL LQLYLYEKSRSPGRFFDLVYHENARVLLHEESIYRFECCSNPTKLSIQLMEYGHEKPE VTAVSIDPNFSSYLFNEYLSSMSDRKLSEGVFLERNKRKHSNNDEPSDSLKAMDGVKV ANGLECKISCKTSKVSYVLDTEDFLFRLRKRRRFSPVGNVPEKLQASKTYAAKVQRFH RFLSKP</aaseq> |
| Gene Sequence |
<dnaseqindica>7719..7871#7529..7640#7286..7449#6928..7080#6713..6851#6526..6626#5783..6454#5411..5496#4672..5337#4321..4575#4091..4218#2650..2804#2349..2569#2234..2263#2050..2125#1805..1938#1296..1578#599..757#411..509#139..307#1..26#gtcatgcgcgatttcaagagtgagaggtctctctactctctccctatcggatccctaccgctttacatatctcacttcaccgggatatattgacttgtctgccttccatgactgtcttgtggtgcaatctcgatgcaggattgataccaacggagtcattattcgtgtcaagacactcttcaacgggtaccctgagctcatccttggcttcaataccttcttgcccaagggttatgcaatcaagctgcaggaggagaagaagcctgttgatttcgtggaagccatcaatttcgtaaacaagattaaggtataaatacacgtgcatacgttatgtgcaactattttccctaggtaataaccgccgtgatacgtagcgatttatgtcatttattattgcttcttttctacagaatcggttccagcatgatgagcatgtctataaggcattcttagacatcctcaacatgtaccgcaaggacaataaatccatccaagatgtttaccatgaggttcctattccctccttttttttctttggccctgcatactatgcgacgcttccgataggagaagttaattagctttgtctttttggcaggttgctgtgttgtttgcagaccacaaagatttactcgaagagttccaacacttcttgcctgatacctccgtgcctccacaagctgtggccccttcaaggcctggtattaggcgggatgacaggacctctctggtgcctcctgctagtaggaatgaaaaggtataagtgccctactattttgtagagcgaagtgctatcaatgaccttatcttgtaaccttaatttactttcagtttcaatctagtgcctaggaggtagttctctagttggcagaaaatactatatcacgttaattatagggaagaagccacatttgcttgacttttgaggaagctgttggcaaaatatggtgcaagaatcaagtgttgcaaatgcaaggagaaacaaaaggaaaacatatgaactctcgttgctaccaaacatgtaatagggaattcatggagtacctggccgtcgactctcatgaacaggatgtgccatataggttaaacgacgccatttattaattttggcatgttactcccttttatgaactaaacattttactccaaagcgtttttaattgttttactatctggggttagaatgaggccaacatgaggcatttcattatgtaggcaagtcccttgttctgctaatatgcttaagctaatataacataaagttagctgaccggttatctcacttctgtgttcagagggataaggctcatccacatgctgaccgtgagagtgttgatcgtcctgatctggaccatgttatccagcgaagacgccctaaggataggcatgattatgatagaggcgataaggatggtgaacttgacagcaaagatcttgatataggacttaagcgcaaaccttttccaaggaagatggaggaccctaccagtgctgatgcacaccatggagggcccctggaaaatcacggaatacttggtgcatctgcttcattatatgataataaagatgcacttaagagtaagtctcttaaaatacaggattgatgtttttgtctggtcatcacagtacattttcttctctacattactattttattttgtccttcaaatgcaagttaggagctgcattatgtaagaacatatgcatgtctgttgcttatccctgttgcagcatatgcctggagaattctgctgcctttccacttttcaattacttatatttacatgtttcctcgcaacatcaggtgtatacacgcaggagttccatttctgcgaaaaagtgaaggagaagctggagcatgatgcttaccaggagtttttgaaatgtcttcacatatacagccaggaaattattactaggagtgaattgaagaacttggtagggttcctatatattcatgctattctgaaatttttaaatgacctctgcctttcttatctgagtggtgttacttgatatgtgatcatgaacatcgtcactgtgttacaggtgaatgatatacttcagcagcatccagatcttatggatgggtttaatgaattcttggagcactgtgagaatataggtaggtcgcatatttaaaatgtatccatgatcattcttgcaagatttctttcgttggttttagatttcatggtttcatctccgaaacattctctctctctccctgcagatggttttctggctggtgtcttcagtaaaagtatgcaatcagtgctttcaacttagtatccccttattctttctccttttagaatctcatgttaacactaattatattaatgaagggcaaactggacgaattgttaaaactgaggaaaggaaagagggaggaaagggaacagaaaaagaaccggacagaatcgagaaagtaccagcatataaggaagctcctagccaaaaacctgtgttctctagcaaagaaaagtatatatacaaacctgtatcagagctcgatctttcaaattgtcagcggtgcactccaagttaccggcttctacctaaacatgtaagctaatttagatcatgttttttttttgttgatgactgatatgttttgtttaacatatggtttaatcctgtttccagtacccaatgcctcccgcaggcaacaagactgagcttggagcttcagtgcttaacgatcactgggtatcagtgacatcaggaagtgaagactattcatttaagcacatgagaaagaatcagtacgaagagagtttatttagatgtgaagatgacaggtgctgatttatgtttctagtaaacatagcatgaacatgcttttacatatttattgccatagtccctttggtaagagtagtcatttattttatcactttaatcaacggctcaactcttcaaacctactatcaatgttcggttctatgctgtgggctaatattgatatcctcacctgagtattgtggaagtagactcataattgtgtgcaatcgaaggtttcatgatgacaactgggatccttgagtcttcaagagtgtcgcggacttgtggttgtaaaattttgctatcctgcttgtgcacatgttataagttagtcaatatgttgatatggtattttgcgttgcttcttgagttagatgtggcatacgcagtagtaactaatggtgttgttgatttggttgtccagtcacacatgtcactatctgtattgtacaataccatgcctttcgggtttcatgaattgtggttggaatccaccctagatggaataggggtcttggtctctatgcttcaagagaaggcatttctccactatctaaaaggaaatgaacattaactaaaaggaacttatgagtatactgtaacttccctgattggtcaaaacatgtgtggcccgtattagattacatctcatgtaccgcttgtgtttttgaacaactgtagatcttcatcgcatgcttctctgatgtgtgttccttgtattttccctttagattttcttgagagaagctcatcgaggagatttttgctaagtgattgttaggaattattaagtagtgaaattaattaaacatgaactaagtcatacaagaacttctttactgtttgtcggtaattggtttctggagatattgaggtggttttcctatttgatgcttacaatgtaaccagaaacctagttttcctggtttcctgcattgtgctcaagtttaattggcacctgcactaaagctgtgctctgccaatgcatgcatgcatgccagcttgaatagatgtttttccatttccatatcctcctgactgggaaactaaataactaatgcttagttcttgcattgagcatcttgagttgtgggcatgaagcatgtggaagagacattacatctctttaaatatgtttctacaacgatgccattcgttgaggatgacaggctctttagactatagtaacaatgttgtgtaactggcatgtctaataaatcataactatcccctgcgattactgtttatatcgggtcatcttttgatgctgattgcaaactggtctgtttttttttcttttcagatttgagttggacatgctgttggaatcagttaatgcagcaactaagcgtgtcgaagagttgatagaaaagatgcaagacaactccctaaaaccagatagcccaatacgcatcgatgagcatttaactcgtatgcatcttttatttgtttaatttgtattgttatgtttggtaatgcatgatacggaggttgcttgactgcccttatgggttatttgtaactgttttacagctttgaatctgaggtgcattgaacggttatatggtgaccatggtctggatgtgatggatgtccttcgaaagaacgctagtgttgctctaccagtcatcttaactaggcttaaacagaagcaggaagaatggtcaaggtgccgatcagatttcaacaaggtttgggcagagatatatgccaaaaattatcacaagtctcttgaccaccgcagtttctatttcaaacagcaagatacaaagaacctgagcacaaaatgtacgtgcggtttttgttgcctgtaatttttttcttatgttagttccagccttgcctggtcgtagaatatttctaattatactcttccttctatagctctattaactgagatcaaagaaattaatgagaagaaaagaaaggaagatgatgtgctccttgctattgctgctggaaataggcgtccaatagttcccaatatgtcatttgactatgtagattcaaacatccatgaagatatgtataagatcattaagtactcctgtggtgaagtctgcagttcctcagaccaactggacaaagttgtgagaatttggacaacttttctggagccaattttgggtgttcagcctcggacacatggtgctgaggatgcagatgcagtcaaacccaagagtcgaaccacaaagtctggtcttgcaactgttggggaaatcaacactactgcagcaggggctgttgccaagcatggccatgatgaaaatattccacaggagcaaacaccgtcatctctggctagaatggtgaatggagtagcaacagatactcaaaatggtttccatgatgttgatcgaactgctcgtagggctgaggaaccatcgaatactgccgtaaatggaagagtgcaaggtgcttcccctggaactaatgaaattcccgctgttagtacccaaaacatgcctaccgagaggtctgcagagaacattcctgttgctaggactgaacagcatggcaatgctaaagcaaatttggaaccaacatcaggtatccatttctgttccttggaacctcttttggtttgtttttgctggtggttatgttttgtcttgccttctaggtgtgaatgcttctagaagttctcatgctggaaatgacactgctgctgaagcccgggctggaaatgaaacattaccatcagtagaggtatgaacacattcttctatggctagttttactttcaatatctcttaccattatcttatggtccttttccccatcgaagatgttttttccccttttgttggttgcttactttattatctttttgtttgtttgttgccacaatgatggtgtcatatggaattgatgagcttgtgttgaatcttttccatataaaatggaacagtcatttgttttgcctaccgagatggcaagatggatgcaacaaatcaatgagaactcataatctatgtttctgttctctttgcagggtggagaaacagggaggtcaggatcaactttaaatggtggaggtgcaagtgagggtaacaaagggcgcctattcaatgaagcttctgcatcccacaataccccaaaagttgaaagagaagagggtgaattatctcctaatggggattttgaagaggacaattttgcgccttttgaagatggagctgtagatggagtatctaaagcgaaggaaggttccacaagcagaccattccagggtaggtctggagaagcacaaccatcttgtgctgaagcagctggtgagaatgatgctgatgctgatgatgagggtgaggaaagcgcacaaaggtctaccgaggacagtgagaatgcctccgagggtggtgaagatgcatcaggaagtgaatctggtgatggtgaggagtgctctcgtgaagatcatgatgaggaagaggaagatatggatcatgatgatcaggatgccaaggctgaaagtgagggtgaggcagaaggaacaactgagacacatgatgtggaagggggaatatcactcccgctatcggaacgctttctacactccgtaaaaccacttgccaagcatgtacccacagctttacatgaccgagatgaaaagtcctcgcgtatattttatgggaatgattcattttatgtactgttcaggctgcatcaggtgagcttccagaaatcttgatcttgtgtcttcgcttgtgctctcgtctgctaaagttgttttaattgcagatcttgtacgaaagattactttcggctaagacaaactcatccagtgctgaaaagaaatggagaacttccaaggatacaaacccacctgacctatatgcaaagtagtgctgctttcctatattgtctaattacttataccaccttaccataaatatgatgaataatcaatctgtcaattttgatgaaggtttataagtgcactttacaacttgctcgatggttcttcggataataccaagtttgaggatgactgccgttctatcattggtactcagtcctatgttctgtttactttggataaactgatatataaagttgtgaagcaggtatgttgtcgtccattattctatatgtcattttggcttggatgcaagattcactgtttgatttacctggtaccagcttcaagctatagcaacagatgaaatggacaacaagcttctccagctttatttatatgaaaaatcaagatcccctgggaggttctttgatctagtctatcatgaaaatgcacgcgtgctcctccatgaagagagcatataccggtttgaatgtgtaagcttcattctgctctgcagactactatgagttccttcatgtacttgtagttgtgtgttccctcttgtatgttaataaaatgatgatagtgtttcttatgtgttcaaaagaacaggttcaccttgtactacggtagtgttagtgctttcttgtgctatagaaatatagatgactaaaggctgttttgtttttcatatcgcagtgctcaaatcctacaaaattgtctattcagctgatggaatatggccatgaaaagcctgaagtgactgcagtatcaattgatcccaatttttcctcgtatctttttaacgagtatttgtcgagtatgtcagacagaaaattgtctgagggtgtcttcctggaaaggtattttatccccttaataaaactgaaatgtatctaatgccatgtctccggtattcatggtcttgtactgttatcccaggaataagcggaagcattcaaataacgacgagccttcagattcgttgaaggccatggatggtgtcaaagtcgctaatggccttgaatgcaagatatcatgcaagacctctaaggttactatctttttctttggcaggtagttcgagtgcatccagttttactggaaattaatcgtatgtgatgatatgcaggtctcatatgtccttgacactgaagatttcttatttcgattgagaaagaggaggagattttcacctgttggaaatgtgcctgagaagctgcaggcttcaaaaacatatgctgcgaaagtgcagcgcttccatagatttctatccaagccttaggggtcatcggcaaaatactggtaattccactaggtttcagaaagtgttaagccctaggcaaagttgcatgatgttgtgttagtggcagggcactgaatatcatttttgctgcattgcagtccttgttgtaactaaatcaggagatgctgctgccgagatcgcgactgttttgcttcgatattgagagaagaagctgtgggagattgatcgattgacccccttggaataacaagtgcttgctgctgggaagaggacgatgttacagaatactatataacagggtaaatacaggaggagaggaaagcaaatcaaagcaaagcatgagtgagcaccgcagtcagctccgatgtgctgaaagaagtgtttgttgtacatatgtattagcagaattaatgttgtttgttcagtaaggtccaggtttaccaatattaattgtttacttactgctctctctctctctcggtcgtaggaggatggatattattctattaactcatcatcaaatcatttgttgctgttggtataggcccctctgttttttgacccacccatgtttttgattgaatctaacgttgtcaaacacagctattgtaatcgatcgatctatccctttggtaaattagacagacttgtaatacatacactaataatttctaatagctgctctgttacatgcgtttactgattt</dnaseqindica> 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| External Link(s) |
