Os01g0115750

From RiceWiki
Revision as of 18:43, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os01g0115750

Description

Protein kinase-like domain containing protein

Version

NM_001185212.1 GI:297719558 GeneID:9270126

Length

3325 bp

Definition

Oryza sativa Japonica Group Os01g0115750, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:856259..859583

Sequence Coding Region

856259..856271,856961..858065,858479..858633,858802..859583

Expression

GEO Profiles:Os01g0115750

Genome Context

<gbrowseImage1> name=NC_008394:856259..859583 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:856259..859583 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgatccctggttcgttctgtcacccaactgcgctgcaagtcttcgtttctgtccagtttgtgtttgcagttcttgtcccacatgcagctggacggcatcatcggcatggctgcgctccgttctcatgcggccatctcagcgacgtgtcgcccccgttccgccggcgaggtgacccgccggagtgcggcgttgcgtcctacgagctgacctgcaccgacgacaagccggctacgattcagatcgacaacgggacataccttgtgatggacatcaagtacaaggattctaccttctgggtcatcgacgccaacatctcggattcacgtaacaattgccctcttcctcgctggaatcgcgatttcggttactacgaccaaatgttatacgagcggcatggagaagactcccgccgccgcagcatccaagctgaactgatgccaccttatcagagcactacagctacttttgtgacatgttcgcaggaaatactgaagagcaatggcaagtacaggcctgttgcttgcatgagcaccaacagctccttcgtctacgtgctaactggcatgaactctgattctattgggagtctcgagccttcctgtgggtacctggccatgactcctctgggtgccggcgaccgcccactggtgctagagaatgcaagctacgccgatgttgtcaaactaatgagaggtggatttgccattcggtttccatacacaagtcgtttttatgtctactcctccaaaatcaaacagtgcatagcacagtcattccaaaatatcgtccaagaggaacgaccaacgtctttcaggattttctacactgtgatatttgactatcatttctggggttgcctgcttcctcatccagttgtccaactgatcgtgggtgtaataccactggccatgtggactttgaagtggattgctgtattttgcaggttcattttggtgcccctggtgatattaaccttcttagcacgcaattactggaagataaggataacaactgatgcagtagagaagttcctccggatgcaattaatgaatggtccaacaaggtatgcctacactgacctcattgcaatcacaggtcacttcagggagaagctcggccaaggaggttatggctctgtatacaaaggtgttctccttccaggcaatgctcacgtggctgtgaaggtgctaggaaactctaactgcaatggcgaagagtttatcagtgaggtctccaccatcggtaggatccaccacatcaatgtagttcatcttgttggtttttgttcagaggaaataaggagggcgcttgtctatgagtacatgccacggggatcgttggacaagtacattttctcatctgaaagaagtttctcatgggataagctcaatgaaattgctttgggcattgctagggggatcaactaccttcatcagggttgcgatatgcagatactccactttgacatcaagccacacaatatccttcttgatgtcaactttgttccaaaggttgctgatttcggccttgccaaattgtgccccagggaccaaagttttgtgccgctcagtgctttacggggaacaataggttatattgctcctgaaatgatatctcgaagcttcggaatcatatcgagcaaatccgatgtctatagctttggaatgttgctactggagatggctggaggaagaagaaactcagacatgtatgcagagaactcaaatcagacctacttcccatcttgggtgtatgaccaactaactgagcagcaagtaggtgttggtgagatacctgctggtactgttgctaacatgcatgagcttgagaggaagctgtgcataatcgggctgcattgcatccagatgaaatctcacgatcggccgacgatgagcgaggtcatagagatgcttgaaggtggcgttgttggcctgcagatgcctccaagaccattcttctgtgatgatgaacccgtgtcacttgcggtgaattctcaccaattctcctccgagctaagtgaaatcttagaggaggatgagaggaaagcatag</cdnaseq>

Protein Sequence

<aaseq>MAIPGSFCHPTALQVFVSVQFVFAVLVPHAAGRHHRHGCAPFSC GHLSDVSPPFRRRGDPPECGVASYELTCTDDKPATIQIDNGTYLVMDIKYKDSTFWVI DANISDSRNNCPLPRWNRDFGYYDQMLYERHGEDSRRRSIQAELMPPYQSTTATFVTC SQEILKSNGKYRPVACMSTNSSFVYVLTGMNSDSIGSLEPSCGYLAMTPLGAGDRPLV LENASYADVVKLMRGGFAIRFPYTSRFYVYSSKIKQCIAQSFQNIVQEERPTSFRIFY TVIFDYHFWGCLLPHPVVQLIVGVIPLAMWTLKWIAVFCRFILVPLVILTFLARNYWK IRITTDAVEKFLRMQLMNGPTRYAYTDLIAITGHFREKLGQGGYGSVYKGVLLPGNAH VAVKVLGNSNCNGEEFISEVSTIGRIHHINVVHLVGFCSEEIRRALVYEYMPRGSLDK YIFSSERSFSWDKLNEIALGIARGINYLHQGCDMQILHFDIKPHNILLDVNFVPKVAD FGLAKLCPRDQSFVPLSALRGTIGYIAPEMISRSFGIISSKSDVYSFGMLLLEMAGGR RNSDMYAENSNQTYFPSWVYDQLTEQQVGVGEIPAGTVANMHELERKLCIIGLHCIQM KSHDRPTMSEVIEMLEGGVVGLQMPPRPFFCDDEPVSLAVNSHQFSSELSEILEEDER KA</aaseq>

Gene Sequence

<dnaseqindica>3313..3325#1519..2623#951..1105#1..782#atggcgatccctggttcgttctgtcacccaactgcgctgcaagtcttcgtttctgtccagtttgtgtttgcagttcttgtcccacatgcagctggacggcatcatcggcatggctgcgctccgttctcatgcggccatctcagcgacgtgtcgcccccgttccgccggcgaggtgacccgccggagtgcggcgttgcgtcctacgagctgacctgcaccgacgacaagccggctacgattcagatcgacaacgggacataccttgtgatggacatcaagtacaaggattctaccttctgggtcatcgacgccaacatctcggattcacgtaacaattgccctcttcctcgctggaatcgcgatttcggttactacgaccaaatgttatacgagcggcatggagaagactcccgccgccgcagcatccaagctgaactgatgccaccttatcagagcactacagctacttttgtgacatgttcgcaggaaatactgaagagcaatggcaagtacaggcctgttgcttgcatgagcaccaacagctccttcgtctacgtgctaactggcatgaactctgattctattgggagtctcgagccttcctgtgggtacctggccatgactcctctgggtgccggcgaccgcccactggtgctagagaatgcaagctacgccgatgttgtcaaactaatgagaggtggatttgccattcggtttccatacacaagtcgtttttatgtctactcctccaaaatcaaacagtgcatagcacagtcattccagtgagtttgcgacatcctgcatgtggtttcattatttctcttttagtcgattttttatatatgcatggatttctcttgcttatctgctcagaaactgctcgggggcatcttaagttcattttacattatattgttttttttacgctttacattatattgtctctgcagaaatatcgtccaagaggaacgaccaacgtctttcaggattttctacactgtgatatttgactatcatttctggggttgcctgcttcctcatccagttgtccaactgatcgtgggtgtaataccactggccatgtggactttgaagtggattgctggtaaagaaccatgtatacttaagaacaaataatcctcattgttactccctccgtttctaaatatttaataccgttgattttttagcacatgtttaaccgttcgtcttattcaaaaacttttgtgaaatatgtaaaactatatgtatacatataagtatatttaataatgaatcaaatgataggaaaataattaataattacttaaaatttttaaataagacgaacggtcaaacatatttaaaaaagtcaacggcgtcaaatatttagaaaatttctgtacgcatctcacagtgcgctggccacattgctaaattcacttgcatcgtggaaacttttaaactttaataagcacattctccctagagcaatgtatagtacagtatgtgttaaatataaagttattttttatgcagtattttgcaggttcattttggtgcccctggtgatattaaccttcttagcacgcaattactggaagataaggataacaactgatgcagtagagaagttcctccggatgcaattaatgaatggtccaacaaggtatgcctacactgacctcattgcaatcacaggtcacttcagggagaagctcggccaaggaggttatggctctgtatacaaaggtgttctccttccaggcaatgctcacgtggctgtgaaggtgctaggaaactctaactgcaatggcgaagagtttatcagtgaggtctccaccatcggtaggatccaccacatcaatgtagttcatcttgttggtttttgttcagaggaaataaggagggcgcttgtctatgagtacatgccacggggatcgttggacaagtacattttctcatctgaaagaagtttctcatgggataagctcaatgaaattgctttgggcattgctagggggatcaactaccttcatcagggttgcgatatgcagatactccactttgacatcaagccacacaatatccttcttgatgtcaactttgttccaaaggttgctgatttcggccttgccaaattgtgccccagggaccaaagttttgtgccgctcagtgctttacggggaacaataggttatattgctcctgaaatgatatctcgaagcttcggaatcatatcgagcaaatccgatgtctatagctttggaatgttgctactggagatggctggaggaagaagaaactcagacatgtatgcagagaactcaaatcagacctacttcccatcttgggtgtatgaccaactaactgagcagcaagtaggtgttggtgagatacctgctggtactgttgctaacatgcatgagcttgagaggaagctgtgcataatcgggctgcattgcatccagatgaaatctcacgatcggccgacgatgagcgaggtcatagagatgcttgaaggtggcgttgttggcctgcagatgcctccaagaccattcttctgtgatgatgaacccgtgtcacttgcggtgaattctcaccaattctcctccgagctaagtgaaatcttagaggaggatgagtgaaacttgtgcatgttttgatgccaaatcagctagtagcttgcttgtaaaatgctgaagctagaaataattgtaaacagtgatatatttctttttcttagaactagtgatatatttcttgtacacttatttgtttgtttacaaacgaaagaagctatatgttatagaaagtgctactgaatgatagctgaaaaaaggtgctacttaatccattcctaatttgttctctgctttgctgtgacattcggatcaacacagccctggagctggaggtgttgactccagaggttagtgtggatagcggcaggagacagctgattgcctttgactgaccgggtaatttctttgccgtgaactagggggaagctttcgtttatcataactttgtgattgggatgccatcgttatgtgtggccattggccaaatgtgttgttggccggtgcatttctgtggtgtgcgtgctgcatgagcacgccagagctcattccgatagtgatgatcaagtctccgagacctagagatatatggacctgtttttgctgaaatgaaatgccacgatttggacagcctagtagcgcctgttgttatcgctgggagctgtaatccaaatatccaatatattcatgtatgactaacaaattcactgtacaccccctgtttatgtttgtctgacgactctgaccacaggaggaaagcatag</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0115750, RefSeq:Os01g0115750