Os01g0150800

From RiceWiki
Revision as of 18:44, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os01g0150800

Description

Protein tyrosine phosphatase-like protein, PTPLA family protein

Version

NM_001048570.1 GI:115434553 GeneID:4324521

Length

4933 bp

Definition

Oryza sativa Japonica Group Os01g0150800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:2741507..2746439

Sequence Coding Region

2741858..2741875,2742021..2742085,2742221..2742332,2742486..2742504,2744797..2744885
,2745238..2745291,2745517..2745587,2745704..2745785,2745880..2745976
,2746134..2746204

Expression

GEO Profiles:Os01g0150800

Genome Context

<gbrowseImage1> name=NC_008394:2741507..2746439 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:2741507..2746439 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcccgaagaagctgctgggatggcgtcagtcttgcggaggctctacctctctgtctacaactggattgtcttcatcggatgggttcaggtgtcgtggtccatgatattggcattgttggagaagagatatgaggccgtctacgctgctgtagagcagcatctgctgttcgcgcagactgctgccatcatggagattcttcattccattgtagggttggtgaggtctccagtgtcttctactcttccacaaattactgcaaggttgttcatgatctggggcatcttgcggagcttccctgagatacacactcatatttttgttacctccttgctcataagctggtgcatcactgaggttaccagatattctttcaatggcatgaaggagtcatttggatttacaccttcctggctcttatggcttaggtacagcaccttcatagtatgctttcctattggtatggttagtgaggttggcctagtctacattgttgttcctttcatgaaggcatctgagaaatactgccttaggatgcccaacaaatggaatttctccatcaaatacttctatgcctctgtctttttcatggctttgtatgccccagtatacccgcacttgttccactatttgatcgtccagcggaagaaggccttggcaaaatcaaaaaccacataa</cdnaseq>

Protein Sequence

<aaseq>MPEEAAGMASVLRRLYLSVYNWIVFIGWVQVSWSMILALLEKRY EAVYAAVEQHLLFAQTAAIMEILHSIVGLVRSPVSSTLPQITARLFMIWGILRSFPEI HTHIFVTSLLISWCITEVTRYSFNGMKESFGFTPSWLLWLRYSTFIVCFPIGMVSEVG LVYIVVPFMKASEKYCLRMPNKWNFSIKYFYASVFFMALYAPVYPHLFHYLIVQRKKA LAKSKTT</aaseq>

Gene Sequence

<dnaseqindica>352..369#515..579#715..826#980..998#3291..3379#3732..3785#4011..4081#4198..4279#4374..4470#4628..4698#aaaggaacttcttttctgaagactgattaaaaaaacatgacctttgaatcaagcttgtggcctctcagataacgaacttttcctgccacctagttatgagtataatatggcttacatttacacaggtgaaaatgaaaatgagaaaagaaaaggcacaataagaaacaacggctgatgatttattatgttctgcccttctttgttgtgacaaagtatcttgatcacaaggacggaattggcagggtagctggcagttgcagtagcattaactgccaactgtgtgctgctaatcttatttgatccaaattatatggttattaatcaaatcccatagccccataatccccaaccatgcccgaagaagctgctgtaagatgctcaaacttgtattttggtgcttctgatgctgtgatagtgtgatgcttgtacatcgattggtggagtagagtatcctggtcaaagccattagcaatctcgatgtcttcctccatctcacatatctctgcaatggcaggggatggcgtcagtcttgcggaggctctacctctctgtctacaactggattgtcttcatcggatggtcagttctattgcctgctgtttgttgagttgtgcatgaatatcgatctcacttccagcatctttgtttgctggtcaattcttggattgtacagggtgttgttttgatcaaggctctttgatttggatcttgcagggttcaggtgtcgtggtccatgatattggcattgttggagaagagatatgaggccgtctacgctgctgtagagcagcatctgctgttcgcgcagactgctgccatcatggaggtttgttttttctcttgttgcctttatagtagtaaaactgtaaatttggatgcagctgtacaacttttttgtttcattgctcatggagattgagaggtgctaaactttttttgttttgctgtttgcctggtgatggtgatactggtagtgcagattcttcattccattgtaggtgagatatcctttctctttataaagaaaataagtcttattttcttcccaatacattgtctttttttttgcagaaaaacatataatatgtcgatgacaaaacttcaacatggggtaccacattaaatttcatttttgactttttactgcaaacgaagggattaaaaatgatatgtgattgagcctaaaagatacataagaatctgggggctcttcagagtggaaattgttaatcatgcaaacactttaggtctaagggttaccttgatgttgttttttggtttttcataatgaattagatcgtggtagatggtaattactggtatgtgcacaacaaaagatatgctgtagttttgatgaatgtatatagactttcatattttttttattaaaacatgcataatttaaaaataatattattttaaaggaaaatcacagaaatattgctcgattggtggaagtcacaaaaatagaaccctattgaattatagttgctcaataggtgacttgtcgaactgggggaggccgacaggcttagctggcgtgagaaaaatccaagtcatgtaaacactttatagtttacatgaatctggtggctctgcatggtggaaattgtagcttgtcgtcccaccgaagaacagcaaagattcgtcgtcccacagctgatcgatactccctcgtcgggagtaggcgaccttccaaaaataatgcaggccctatgccaattcaaaaaagtgacgtggtggagcggtctgctagcacactcggattaaatgcactcatggattaaaatgctactacctccatcctaaatgtagctatttcttgcacagtgccttgtcccaaaataaaactatttccccacctacctcctcatctcaaccaatcacaaccattatgtttcatctactttctcttctcaaccaatcacacactttctataattattctcacctactttcgttatacctgtgacaacctcaataatacttacattttggcacggaggaagtatctagcctacctgattcaagcatgtgtcaggccatccccaacccagaaactattaagtagtttccatacttaccatgtcatatagatactatgtatagaaactatatatccaatagatggtgtcttcaaattaaattctcatccaatcatcgctcttctctctccttttatccacctatcctcttgttttcattcttgattcttgtgtagagatggttttttgcatgagaaatggtttcttcatctttttacctctttcctcattaactctcttgccacatcaaatttttgcttatgtgacaatgtatttaggtcctgattgtttcagcttaagattattgtaatctagattattgaaccatattactataagctgaattataataagccgccatagaataagctgcgagctgtttgtttccctggattataagttgttttttagttgttagccacccaataatctaaaaaagcacctttagagtggattactagattatagtaatatggcttatagattgtaataatctatcataatgagctatatgtttgttttagcttattcctaataatccagattataataatcctaagctgaatcaaacatggccttaatgctatggacacgatatgacatggagggttggggatggcctcagggagttgaaactagctgcatacacggtttaaatgcacaggccctcatgtggaccaatcggcttcccagtggacgacaggcctccatgcatgtgccatgtagacctgcggttgccgatatgttttgtggtggccaggtcagtctgcagctgatcgataggtggcgtggcaggtcctgtcgttttgtagctggttgatgggactatgtggagttaggctgacagactttccggtccacatgtgtctgatatgggcttgtcggcctcccctagaaggtccctatcaaacaacccaagaccgtcatgcttctatttctatgatttttgacaactgaacaatatttctacgattttccattaaaataatgatatatatttttaaacattctaactttcacatttgtgtggtgtaatatgtagcctctagcctctttttcaatcatttgaaatcattatgatagtagcaatagtctggaatttgaatacatctagagaagtttcaatgttgagaaaatcatcttgttagcttcttcctaaggagagaaaggaagtgtcctgttagactcaattagttcccccccaaaaaatattttcttattactgtaaccttaattgttgagaagggttggtgaggtctccagtgtcttctactcttccacaaattactgcaaggttgttcatgatctggggcatcttgcggagcttccctgaggtaatatcaggaccttactcccaagttattagatagtttctatcttcaaaacaagttctggattagaaagcacttcttaaaatgacaaaacatactatatgttaggtaatgtttcagctattagaacatatcccatactttcgtaatgactctgagtaggcattggtcaaaccaaagcggcagaaattgcataagtaatgaagctgatgcaatcacattgtggagaaggataaaatagtgtcctttccttccgcagcatcctagtttcctatttcctgtattttaacttctcatcaagtaattgttttgtttataaacaatatcggtgaatcactgtccacatgttttgcagatacacactcatatttttgttacctccttgctcataagctggtgcatcactgaggtatgttactccctaaaacttttgaccaaattactcacttggaagaccatgaattttggatgcaattttattataattctgcttcttaaaatgatagtagttgttttcctgaaagaaaatgccaagctttgaaagttcctgttttgagcttagctgaacaaagattatgaaaatttcttcactacagagcatgactttgtagaaaaaaaaacttattccttgcaggttaccagatattctttcaatggcatgaaggagtcatttggatttacaccttcctggctcttatggcttaggttggttctagctgtaaacagatcataatatgtagcgcaaacttcaaatgaaactcattatctgtgaattctcttaaaaataagtacttattattttcatactgatttctttgcaggtacagcaccttcatagtatgctttcctattggtatggttagtgaggttggcctagtctacattgttgttcctttcatgaaggtaatttgaataacttagtagaaaggaagagctccgcctccatttgataacaatcttgtttagaaactattttcttttggatgagcaatatcaggcatctgagaaatactgccttaggatgcccaacaaatggaatttctccatcaaatacttctatgcctctgtctttttcatggctttgtatgccccaggtagtatttcccttcaattatacttcatttagtaattgattatataacctagtagtttttcttaaagaaagttagctgtaggattttctgaaaggaaatcaagtaggatttgctaactcactgtcagtgccttgttgtttcatttggatgagtgcagtatacccgcacttgttccactatttgatcgtccagcggaagaaggccttggcaaaatcaaaaaccacataactactcaagagctatctaatctggtttctgctcgcagctacagctcaggttgctaccacttcttgaacaaagaagtaaaaatgtattagaatggaaatgccgaactacacagactatcttttcccttggtaaataaaaatggacatgagtactattttcatgatttgttaatggtgtgttgtaccaaactttggcttttccatatgtaaataaaattgcactccatatcgatgcc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0150800, RefSeq:Os01g0150800