Os01g0178700
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Contents
Annotated Information
Function
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Expression
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Evolution
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Structured Information
| Gene Name |
Os01g0178700 |
|---|---|
| Description |
Similar to Membrane associated protein with a RING finger, 4xtransmembrane domain, transcripts identified by EST |
| Version |
NM_001048729.1 GI:115434871 GeneID:4323873 |
| Length |
3742 bp |
| Definition |
Oryza sativa Japonica Group Os01g0178700, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 1:4090073..4093814 |
| Sequence Coding Region |
4091447..4092030,4092408..4092533,4092619..4092895,4093021..4093251 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008394:4090073..4093814 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008394:4090073..4093814 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atgggggactctggaaatgccagtcatcgtgatcacacgatcgacatactgagaaatgatgcaactttcccatcaacatctcatcaggataatcataataacttggatgagttgcaccaaactagagggcctctaaatgatgttcctcatgtcccagaaagttctgctagtgcaactcctgcatctatctcccgaaacgcttcttttgcaagaagagatcaaggacaccgtcaaccaaatcctttgaattctggcttctggatctcaattgagcttattgtaagtttaagccagattatagcagctattactgtcctgtcagtatcaaggaacgagcatcctcatgctcctttggctcagtggcttattggttatacgataggttgtgttgctactcttcctcacctttattggcgatttctccaccgcaatcggcagaacacagagcaagaatcaacaaatcaggtttcatctgaaagggacgtatatgagcctaattcttatgtagtagtttcgtctgctcatggatcagaagttgtggacagtggtaataatggtggagtagcaaggattgcaagtccaagggtctacgcattggttgcgtgcttcaaattggctctggattgtttctttgctgtgtggtttgttgttgggaatgtgtggatattcgggggccgtacttctctccatgacgctcctaacttgtacaggctgtgcatagtattccttgcattcggcttcatcggctatgccctgcctttcatcctatgtacaatgatatgctgctgcctaccctgcattatctccatgatgggcatccacgaggatttggattttaacagaggcgctactgcagaagcaatcgatgccttggtggcatacaagttccaatcgaaaaagtttcaagatggagaagcgggagaagataatggtggagtattggcagctggaacagacaaagagcgaactatttctgcagaagacgctgtatgctgcatctgcttgtcaaagttctcaaacaacgaagatctacgggagcttccctgcaatcatgttttccacttggaatgcgtcgataaatggctcaagataaacgcactgtgccctctttgcaaggctgacttaggcggctcgacgaatgctccggactcgagctccaggagcagccatgacagcaacaacagcagagtcaggaacgacgtcgagtcacaacagtag</cdnaseq> |
| Protein Sequence |
<aaseq>MGDSGNASHRDHTIDILRNDATFPSTSHQDNHNNLDELHQTRGP LNDVPHVPESSASATPASISRNASFARRDQGHRQPNPLNSGFWISIELIVSLSQIIAA ITVLSVSRNEHPHAPLAQWLIGYTIGCVATLPHLYWRFLHRNRQNTEQESTNQVSSER DVYEPNSYVVVSSAHGSEVVDSGNNGGVARIASPRVYALVACFKLALDCFFAVWFVVG NVWIFGGRTSLHDAPNLYRLCIVFLAFGFIGYALPFILCTMICCCLPCIISMMGIHED LDFNRGATAEAIDALVAYKFQSKKFQDGEAGEDNGGVLAAGTDKERTISAEDAVCCIC LSKFSNNEDLRELPCNHVFHLECVDKWLKINALCPLCKADLGGSTNAPDSSSRSSHDS NNSRVRNDVESQQ</aaseq> |
| Gene Sequence |
<dnaseqindica>1375..1958#2336..2461#2547..2823#2949..3179#ggggagaagaaagcgtaagaaaaataaaaggagaaaaaggaatagagaaattggggaagagagctacctcgaatcgaagctgcgatctccacctggtatggttgatttttctccggattcctctcgctccgttggattggggattgattgattgattggttgattgcttgcttcggtgagttccaattcagtggagcgtaggctaccgaatccaccgatttcgcttgcgttcttggttgaactgttcgatccccacgagctgctgccatgttcttgctgatttttttttttttgaaacctatgttcttgctgatttgggttcttggccaatgggataggatcatagaaatgcttgtgggatggggttctgtttgattttctttctctccccaatgctgtctgtccacattgttttcttgtttgttcaggtgaaataggagaattgatgaattgctgagatttggtgattagagggacctttgctgctgaggcattgaggtatggtgttcattccttctccatgctgagtgcttcatttgtgtattagctgacatcaccgtaaggttcttgagttgcaaataatggatggctgctattgtgttgcatttgcattggtctactaatccaattttaactaggttgctttctaatcgggggcaatcgagtccttaccactggaattgttttaatggacttgttgaattactcctgaaagattgatctgcagtcaagttctaagattgcaggagtatgttgatgaaataattgattctgtaatataagtaacttgtaatgtaaaatgcaaaccgagaatagatgattggtctaacctaagggaaaggctataatcattttagaatacatgcaatcaaatctcgaaatcttttaaatcactaatatattaagaaaacattaatattttatatgtaaaaatgacattgttagatttatcatgaaaataatttcatttagttatataattattatagatatattattagagaaggcaatgatcaaacatgtcatactatttcaatgccctacataacaagtagtaaataagaattaagagggagtattttttaaattctggctatgatcttcccttctagtctaatcctgtccaacaatatatgatgtcttaccttgcacacatgctttctttgtttaggcaggcagttaattgacaccttgtttactttcctttccttaaggtacactaaaagcaagggtgtgaaaaaggcaacttcaattgaaaacatctacatatctaggaatgtcctgaaactaatgtgtggagtaaacttctagtttattgctgtccgtcctgttgggccacagtgcgaaggtcaggcagatagtcatccattactgatgggggactctggaaatgccagtcatcgtgatcacacgatcgacatactgagaaatgatgcaactttcccatcaacatctcatcaggataatcataataacttggatgagttgcaccaaactagagggcctctaaatgatgttcctcatgtcccagaaagttctgctagtgcaactcctgcatctatctcccgaaacgcttcttttgcaagaagagatcaaggacaccgtcaaccaaatcctttgaattctggcttctggatctcaattgagcttattgtaagtttaagccagattatagcagctattactgtcctgtcagtatcaaggaacgagcatcctcatgctcctttggctcagtggcttattggttatacgataggttgtgttgctactcttcctcacctttattggcgatttctccaccgcaatcggcagaacacagagcaagaatcaacaaatcaggtttcatctgaaagggacgtatatgagcctaattcttatgtagtagtttcgtctgctcatggatcagaagttgtggacagtggtaataatggtggagtagcaaggattgcaagtccaaggtagcattatctttcttgggaatttatctttagtatatttgactgcactacctctcactctcaggctcataagtttgtttaagtggaaccatcaaccaccgatatgctatggcagagcaaccgcctatatttgagaagatctgttttttgttatcaaatttcatatgatctttagcaatttattttactatgatgtctttgcacctgctgtctacctggtagccattgaaaacagttgggctttcagtatttctaacactttaggtcacttatctggatactagaagattcaacatcatatgaaaccatctgagttctttcttctaactaacatttggattcatttatgaggtaacaatgccttctgtgctttatagggtctacgcattggttgcgtgcttcaaattggctctggattgtttctttgctgtgtggtttgttgttgggaatgtgtggatattcgggggccgtacttctctccatgacgctcctaacttgtacaggtctgtgatgctaagcagccatagacaatgtgttccttgcttctcaacttagatgtttactcatttgttagtgatcatttttcaggctgtgcatagtattccttgcattcggcttcatcggctatgccctgcctttcatcctatgtacaatgatatgctgctgcctaccctgcattatctccatgatgggcatccacgaggatttggattttaacagaggcgctactgcagaagcaatcgatgccttggtggcatacaagttccaatcgaaaaagtttcaagatggagaagcgggagaagataatggtggagtattggcagctggaacagacaaagagcgaactatttctgcagaagacgctgtgagtgtcctcctgcattcctgtttacactttaccaaacctgggatatactatgctcatgtttacacgtctgtagcatgtttccacatatgcaattgacacctatggatctctgggctctgcaggtatgctgcatctgcttgtcaaagttctcaaacaacgaagatctacgggagcttccctgcaatcatgttttccacttggaatgcgtcgataaatggctcaagataaacgcactgtgccctctttgcaaggctgacttaggcggctcgacgaatgctccggactcgagctccaggagcagccatgacagcaacaacagcagagtcaggaacgacgtcgagtcacaacagtagctgctctcatgccctttcccatgagcatggggatggaacacattcttgacaatctacaaattggcatgcaacttctcaagtccctttttttttcagacagacttgaatagagcatttgcctacactgctctctggtgttaacccagaaactcctatgaggctgaggctatggctatgagttgctgcctgcagtttgttctgaactgaagttgcctgtaaggctgtaacagattatagatggtgttggaatagttatcatgatgatcacctgagttgagcatattaggttgttgaggttaaccttcaaccggggaggttcaatgtaattatctccttgtttaggaaaaaatcccctcccctttgtatctgctcccttgtatagaaaacaaccatctccattgtatatcagatcaattttgcctgcattttgtaaattcagttagtaggcagagatctcccagcactcatcaagtgcttgagcaagtacagattagcagttgagtttattctactgtaatgcaacacttatagatgatattaccatgacataatcatttgagccc</dnaseqindica> |
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