Os01g0324200

From RiceWiki
Revision as of 18:49, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os01g0324200

Description

Conserved hypothetical protein

Version

NM_001185378.1 GI:297719890 GeneID:9271854

Length

7607 bp

Definition

Oryza sativa Japonica Group Os01g0324200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:12536681..12544287

Sequence Coding Region

12536681..12536751,12536876..12537669,12540695..12541087,12541490..12541529,12542120..12542458
,12542711..12542771,12544129..12544287

Expression

GEO Profiles:Os01g0324200

Genome Context

<gbrowseImage1> name=NC_008394:12536681..12544287 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:12536681..12544287 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggctcccgtggagagtactgtgcaagcagcgaggtcatccgtcgttcccaatgaagtatctactgggatcgatcctgatgcagagtttagggtgtgtgttcaattcagtcagtacattgctaagcttgatgatggtagttttgttcatgtaccccgcaaatatgaggaatgggttgtggactatcgtgaatgcacattagagagattggtaaaggactttgcagccaagataaattggggtaggtgccagcaggtggttgtgtgtggatatgacacgggcactggtgaggaaacaaagtttactgacaatatggatctagtgcatgcattttttgttaggaagagtgagaggaggttggttttatttgtggatgtggtggataaacctgttcagcttgttactagctcttctgtttcagagattaatgggacagtcatggatgaggttgttacagctaggcatgctgatgctacagattgtaacagtcaacatgccattgattgggagagtttggagatagctccaattccaacagagcaggttcaacagcatgtcattgattgggatggagtggagataactccaattgcagagacacagatagggtcatcaatgcctgtgatggacgaagatgaaatgtatgcatttgttggtcttagagctgaggatgagagagcagaacaagctagacttgaagctgaaaaacaattggactcggcacctagtccggctgcaggtcatgcccaagggaacttagacaatgaggctgacataggtgttagtgatgtggttccgggtgaatctgaagttttctatgacaggaatgaccctccaatgattacaggaagttcatatctaagtcccagggaccagggatcggctatggcagcaactggggacgatacaaggtcccaggggcctgctagggcagctggggacggtggggtgtccgttctgggcccccaatggcggcgacggcgcacggcagcggaatggtggcgcagcttggcgcagggtgttgggggcggtggcgtcgactgccggcgtcggcgcttggtggcagcgcctggctgcgggggcgtcgagtgccggcggcggcgcttggtggcggcgcccggcggcggggttggcagcgcccggcggcgaacggtggcgacgaggttggcgctcacggccaagccgaacgaagacagagacgagactggagggatctcgatccagagaaaaggatttctcttcctttcatctgacaacaccatcttcatgcgtgagcagtccaggaagccgtcattacgcacctccttgcactcgttggcggcgccggtgagggccgcctccgcatcttatcggccgccgaaaggaaaggaaacggactcgccttgcagcaagaatctttttgctcgtttttgcttcaagaatggcggaatagtggctcttgcggagccaaatctcgacagagccgaggagaggagagcctcacggatggggactagaagtgcacgtgagtcgatctcgacggcaaaggtgagcagcagccggtggctagcggacgcccctctcccgggcgtggcgatgatgggtttcttgacaacggtcagcttggcctccgtgcaagcgagggctcggcgatggcttgggatgcccgagaagaatgcattcccagatttcccctatggtcttccaaacgctcaggttattttcagggcaactcattggctccggttttgggcacaactacaaaggtgtgatgaagatgaagattttctgaaggttgcatgccgaaagttggagaccacggttatgcaactatttgctaattatggttggagatttacaaatagacttcaataa</cdnaseq>

Protein Sequence

<aaseq>MAAPVESTVQAARSSVVPNEVSTGIDPDAEFRVCVQFSQYIAKL DDGSFVHVPRKYEEWVVDYRECTLERLVKDFAAKINWGRCQQVVVCGYDTGTGEETKF TDNMDLVHAFFVRKSERRLVLFVDVVDKPVQLVTSSSVSEINGTVMDEVVTARHADAT DCNSQHAIDWESLEIAPIPTEQVQQHVIDWDGVEITPIAETQIGSSMPVMDEDEMYAF VGLRAEDERAEQARLEAEKQLDSAPSPAAGHAQGNLDNEADIGVSDVVPGESEVFYDR NDPPMITGSSYLSPRDQGSAMAATGDDTRSQGPARAAGDGGVSVLGPQWRRRRTAAEW WRSLAQGVGGGGVDCRRRRLVAAPGCGGVECRRRRLVAAPGGGVGSARRRTVATRLAL TAKPNEDRDETGGISIQRKGFLFLSSDNTIFMREQSRKPSLRTSLHSLAAPVRAASAS YRPPKGKETDSPCSKNLFARFCFKNGGIVALAEPNLDRAEERRASRMGTRSARESIST AKVSSSRWLADAPLPGVAMMGFLTTVSLASVQARARRWLGMPEKNAFPDFPYGLPNAQ VIFRATHWLRFWAQLQRCDEDEDFLKVACRKLETTVMQLFANYGWRFTNRLQ</aaseq>

Gene Sequence

<dnaseqindica>1..71#196..989#4015..4407#4810..4849#5440..5778#6031..6091#7449..7607#atggcggctcccgtggagagtactgtgcaagcagcgaggtcatccgtcgttcccaatgaagtatctactgggtaaggccatagacccatcatcttctatttctgttcaacaggaggatcaataacctaggtgataaccgatttagtattaaaactaatggatctatctctcattttttgtgttcatatacgataggatcgatcctgatgcagagtttagggtgtgtgttcaattcagtcagtacattgctaagcttgatgatggtagttttgttcatgtaccccgcaaatatgaggaatgggttgtggactatcgtgaatgcacattagagagattggtaaaggactttgcagccaagataaattggggtaggtgccagcaggtggttgtgtgtggatatgacacgggcactggtgaggaaacaaagtttactgacaatatggatctagtgcatgcattttttgttaggaagagtgagaggaggttggttttatttgtggatgtggtggataaacctgttcagcttgttactagctcttctgtttcagagattaatgggacagtcatggatgaggttgttacagctaggcatgctgatgctacagattgtaacagtcaacatgccattgattgggagagtttggagatagctccaattccaacagagcaggttcaacagcatgtcattgattgggatggagtggagataactccaattgcagagacacagatagggtcatcaatgcctgtgatggacgaagatgaaatgtatgcatttgttggtcttagagctgaggatgagagagcagaacaagctagacttgaagctgaaaaacaattggactcggcacctagtccggctgcaggtcatgcccaagggaacttagacaatgaggctgacataggtgttagtgatgtggttccgggtgaatctgaagttttctatgacaggaatgaccctccaatgattacaggaagttcatatctaagtatggttgagtttagatcagctgtgcggcaacacgctataaagggtcagtttgagcttgggacagagtcgagtgataaagaaaggttcagaggcttttgcaaggctgagggatgtccatgggctattgtagcaaggttgatgccggatgaaaaatctgttagggtactaacaactaacttagatttgtatcggcctttaaattcttgtttgtttttaataattgtagcatggtactaagtaatccaacttttattgcaggttactttgaataaatttccccatcattgttcataaactggcagagtaaagaccaagatggcaacatataagtgggtggcagagaaggcaattccttttttgaagaaggattcaaatatgggtctgacgaagttgaaagaggagttagagaccacatacaacgtcacaataggataccatacagtgtgccaaggtaggcagaaggctttagaaaagatttttgggtcatgggatgagagcttcacatatttgttcaacttcaaggctgaggttgagctgaaaatgcctggaagtgttgtggagatagatgtactggagaatgaagatggggtttattttcatcagtttttctgtgcattcaaaccttgcattgatggtttcataaatggatgtcgaccatatttgagcatagactcaatagcacttaatggagcttggaatggtcatttagcttctgctacatccatagatgggcacaactggatgtttccggttgcatttggattctttcaaagtgagaccactgataattggacttggtttatgcagcagcttcataaggcaataggggatcaatcacccctagcaattagctcagatgcttgtaaggggctagagaatgccgtgaaatatgttttctctgcagctgagcatagggaatgattttggcacttgatgcagaatttcataaagaaatttcatggtccagtctttggaaacatgtaccatgcagctaggtctttcatgccagataggtatgactattacatgaataaaattcatgaggcaaattcagatgtgaagccatacttggaaatatatcataaactgctttggatgaggagcaaattctcagaaggcataaaatgtgacttcgtcaccaataacctagcagagtcgtggaacaaatggattaaggaaaagaaagatcttccaattgtagagcttgcagatggcatcagatcgaagacaatggatctattggccagtaggaggaggataggtaataaattggatggtgtgatgctccctgttgtaattcagcaactgaatacgatgactagaactttgggccacttgagggtagttcaaggtaatagagaccaggcaaaggtgactgagatcactcctgaacatgacattattaggcatgcagtcaatctcacagaacatacatgcacctttagagagtggcaagtttctgggaaaccatgcccacatgcattagctctcattatatcacatagaaatcctagaatggctgattatttggatcccttctattcagtggaaaagtttaagcttgcatatgcagacgttattcaaccatttctagataagtctcaatggcccaaggttaatattggtttcaagttgttgccacctttgactaaaaaaggagtagggaggcaaaggaagaatagaatagttgtgtgccttgagaaaggacaaagcaagcctaggaccaaaggcaagtggcaggttcagtgtaagaggtgtcttgccatgggacataggccatcatcctcaaaatgtcctttaaatggtaccaagaaaaaaaggtaaaaccatacatttacttatttttgcatattgtatatctatttacttgttttacattttcaggaagagtcgtgcgaaacaaggaaggccagtaggctcaactagtggtgcagcaggccctagcacaccaaaacgacaaaaagtcgtaagaagtgattccacttgcactagtcctggtcctatcactagaaggtacatatttttttctatttcaatggtatttttaatcatgtatttaattttactaacactcattttcttctaggcaaatggcattgatcaatgctggtgaacaaggatcaagtcaaatggcaacccctctaaggcctccaagagctgcaaagaagatcactccaaagaaagggaaaaaataagtgattctaagtagtattttcatttgtggacgattttctagtggcaaacataggctttattttgcaatatgaacctgtgtgacttggttatgtaacctcttatatttggttatgtaatctggatggaattctcaaatttggttatttagacttgtttggcttcttgtacgaacaacgtattatggctacatgctgccaaaatttaagtgacattttttagtatgtgctgtgaatttgacatttttgagtatgtgctgtgaaaatttgacatttttgagatgtgctgtaaaaatttgacatttttgggtacatgctgtcaaaatttgatatttttgggtatatgctgtcaaaatttgacatttttgggtatatgctgccaagtgacatctctcccattgtctgcttgaaaataacaagtttacattgcaacgttgcacaaatctgtaggcatttctcacatgagcatatggtctcacaaagctgtaggcatatgctgaggtagttaactgacaggtattttatatcatcacaaaatgaacatatgatcaactatccatcttcctttcttcagattacataacccaaacaggaacaagtgcaaactgaagctgtctgtattgtgctgctgaaagcctgaaactgaaccaatttccagctgccacctagtatatcttctatcacatcacatggaaaattgttgccaatttcagatatgtacactcccataaacaaccaaatatgtctatgtatatagtatacacaatacattaactaatacatccaaatatgaactagtactgccctagctctgtgtcctgtaaatacaaggtcccagggaccagggatcggctatggcagcaactggggacgatacaaggtcccaggggcctgctagggcagctggggacggtggggtgtccgttctgggcccccaatggcggcgacggcgcacggcagcggaatggtggcgcagcttggcgcagggtgttgggggcggtggcgtcgactgccggcgtcggcgcttggtggcagcgcctggctgcgggggcgtcgagtgccggcggcggcgcttggtggcggcgcccggcggcggggttggcagcgcccggcggcgaacggtggcgacgaggttggcgctcacggccaagccgaacgaagacagagacgagactggagggatctcgatccagagaaaaggatttctcttcctttcatctgacagtgggcccaggggcaaaacagtccacaaagtttgagaaaaaatacaaatgggattaagaaatgagaaataaatgaaaaactgagaaagtggtaccaagtagagcaattagcattcctaataacatattatagagggcacgcgaattgggtggtaaaaaagttaaggcacgcgaattgaatggtaaatagtctaaattctctgtgcatgcgtgtgttaatggtggagaggagctacttttcttactcctgagtccatattcggcaagatgatatttattttgggctacctaggtgctacataacggttagcacttgggtgtggctggtgctagtggtggtgctggctttatccgaatgaatttgcggtgagtgactactctatacattagcgccacgttgcagacaccatcttcatgcgtgagcagtccaggaagccgtcattgttggtgttacgggagggataactaaagttggaagagaaggtcgggaaggattaaagagtagtttgttctagcatgtagtagccatggattgatagtgtcattttacgaaaaaaattgttttggtatttaagtgtaacctacttttatcgatggcatagtttcatttttttttccaagtggaacatgtggcgtcgatatgagaaaattaagaatatgccactttctagtttagcttcaatgtaacgccatctacgatatagttgataaaaatgtcgcttattatattttcagcctgataatatgctattttggggtttagatcattttttttctctctattttctccttcacacaatttccacgcaaaaggacctaattggccttgccccttcaggtcgtccaaagcaggccagctagccgcgagaattttcagtatttaccatccaattcgcatgtattttaggatttatcatccaattcgcaacacttttagaatttgccactgggagtatgaaattctttattccttgccactcccgtcagcccgtccctttcatccctaatgccgtgttggttcgtcttcttccagacgcacctccttgcactcgttggcggcgccggtgagggccgcctccgcatcttatcggccgccgaaaggaaaggaaacggactcgccttgcagcaagaatctttttgctcgtttttgcttcaagaatggcggaatagtggctcttgcggagccaaatctcgacagagccgaggagaggagagcctcacggatggggactagaagtgcacgtgagtcgatctcgacggcaaaggtgagcagcagccggtggctagcggacgcccctctcccgggcgtggcgatgatgggtttcttgacaacggtcagcttggcctccgtgcaagcgagggctcggcgatggtaacagtgatggaaggagactacgcacatcggatgggagtggcacggaatgaagaattttgcactcccggtggtaaaatctgaaagtgttgcgaattggatggcaaatcctaaaataagtgtgaactggatggcaaatactgaaaattttcgctagccgccgttgctagtgagaagcatacaaaggctatcaccatttcaacgctgctgaattatactcactttggtgggaccgtccgatttcttcctcaggcttgggatgcccgagaagaatgcattcccagatttcccctatggtcttccaaacgctcaggtaatcttggcccacggaattttcccctaaggaccaggatcccatgaaaaactagatgaataccccgccgtgttgctgtggaaaattaagttgcataatatgtacaaataagatgtaatatgattatcaaaactaaaacaaattgatagtacaatttgagcctaaaaataattgagattgcatgggtttatgagagaataaagaagagacaatttgaaccatagatctatcatccaaaggctagaaataattagggtggtgtggcttaataagagaagagagaaatagtattaactacacttagtcgggatgaactatataagtatattattatagatcgcggttttttttggcaaggggatgaccataagaaaaaatacaggctcactaggtgggatgttgtttgtcaacccaaggaccagggggtcttgggattcataatttggagatacaaaataaatgtcttttaagtaaatggttgtttaagttaattaatgaggatggggtttggcatgatttattgaagaggaaatatctttataataaatctataacccaagttgacaggaaacaaggtgattcccatttttggtctggtcttatgaatgtcaaaagtaatttcttaaatatgggttcttggattgttaataatggggaacaaatcagattttgggaagatagatggattggtaacttggcttttaaggataaatatccatctttgtacgcaattgttcggaggaaaacatcttctattgccactgttatgggatatgttccgcttaatgtttctttcaggagagctttagttggtcagaatcttgtttgttggcatcagttgtgtgcctctatagtatatattcagttgaatgatttgtctgatagttttagatggaatttccatcagaatggcttgttctcggtgaggtctatgtacctagctttaattaataatggctatatcgagaaaaacaagtgtatttggaagcttaagttgccacttaagattaaaattttcatgtggtacctgcttaaaggggttgtgttaactaaggataatttggcaaggcgtaactagaatggcagcttgaggtgttctttttgtttgaataatgagtctattcaacatctctttatggattgtcattttacgaaatttctatggagagcagttcagttctcttttggttttaatcttccagttagcatatctcatatttttaatgggtggcttttaggagttgataagaaaatgagtaaactgatacttgttggagcttctgccatttgttgggcaatatggctgagtagaaacgatatggtttttgacaaatcaccatcattttcctatatgcaggttattttcagggcaactcattggctccggttttgggcacaactacaaaggtgtgatgaagatgaagattttctgaaggttgcatgccgaaagttggagaccacggttatgcaactatttgctaattatggttggagatttacaaatagacttcaataa</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0324200, RefSeq:Os01g0324200