Os01g0349800

From RiceWiki
Revision as of 18:50, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os01g0349800

Description

Similar to Cytochrome P450

Version

NM_001049515.1 GI:115436443 GeneID:4326475

Length

3288 bp

Definition

Oryza sativa Japonica Group Os01g0349800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:14083977..14087264

Sequence Coding Region

14084011..14084290,14084450..14084673,14085262..14085515,14085821..14086202,14086718..14087149

Expression

GEO Profiles:Os01g0349800

Genome Context

<gbrowseImage1> name=NC_008394:14083977..14087264 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:14083977..14087264 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggatgttccttctgttgtgatccccattttggttgtgctggtctcgagactcctgacaagcgccctggtgcacctgttgtggaagccctacgccatcaccaagctgttccgtgggcagggcatcacaggccccaaatacaggctcttcgtcgggtccctcccggagatcaagcgcatgaaggccgccgctgccgccgacgaggtcgccgccggcgcccactcccacgacttcatccccatcgtgctgccccagcacagcaaatgggccacagatcacgggaagacgtttctttactggcttggcgctgtgccggccgtcagcctcggcagggtggagcaggtgaagcaggtgctgttggagaggacggggtccttcacgaagaactacatgaacgcgaacctggaggcgctgctgggcaagggcctcatcctggccaacggcgaggattgggagcgccatcgcaaggttgtgcacccagcgttcaaccacgacaagctcaagttcatgtctgtggtcatggcggaaagcgtggagtcgatggtccagcgctggcaatcacagatacagcaagctggaaataaccaggttgaattagacctaagcagagagttgtcagagcttacttctgatgtgatcacccgctcggccttcggtagcagccacgaggagggcaaagaggtctaccaagcacagaaagagctccaagaactggccttctcatcatcattagatgtgccagctctggtttttctaaggaaattaccaatcataagggggaacacacgagctcatcagctcgtcaagaaatcgaggaccatgctcatggagataatcgaaggacggcttgccaaagtcgaagctgccgaagccggctatggcagtgatcttcttggactgatgctggaggcgcgagctctggagagggaagggaacggcctggttctcaccacccaggagatcatagacgagtgcaagaccttcttcttcgcggggcaagacactacctccaaccacctcgtctggacgatgttcctgctgagcagcaacgctcagtggcaagacaagctacgggaggaggtgctgacagtgtgtggagatgcaattccaacgcccgacatggctaacaggctgaaactggttaacatggttctcttggaatcactgaggctgtacagcccagtagtaatcataaggaggattgctggttcagatatcgatcttggcaacctaaaaattcccaagggaactgtgctttccataccgatcgccaagatacaccgggacagggatgtatggggacccgatgccgacgagttcaaccctgcaaggttcaagaatggcgtgtcgagagccgcgagctacccaaacgcgctgctgtccttctcacagggtccaagaggttgcatcggccagaccttcgcgatgctagagtcgcagatcgcgatcgccatgatcctccagaggttcgagtttaggctgtctccatcgtacgttcatgctcccatggaggcgatcaccttgaggcccaggtttggacttcctgttgtcctaaggaatctccagggatga</cdnaseq>

Protein Sequence

<aaseq>MDVPSVVIPILVVLVSRLLTSALVHLLWKPYAITKLFRGQGITG PKYRLFVGSLPEIKRMKAAAAADEVAAGAHSHDFIPIVLPQHSKWATDHGKTFLYWLG AVPAVSLGRVEQVKQVLLERTGSFTKNYMNANLEALLGKGLILANGEDWERHRKVVHP AFNHDKLKFMSVVMAESVESMVQRWQSQIQQAGNNQVELDLSRELSELTSDVITRSAF GSSHEEGKEVYQAQKELQELAFSSSLDVPALVFLRKLPIIRGNTRAHQLVKKSRTMLM EIIEGRLAKVEAAEAGYGSDLLGLMLEARALEREGNGLVLTTQEIIDECKTFFFAGQD TTSNHLVWTMFLLSSNAQWQDKLREEVLTVCGDAIPTPDMANRLKLVNMVLLESLRLY SPVVIIRRIAGSDIDLGNLKIPKGTVLSIPIAKIHRDRDVWGPDADEFNPARFKNGVS RAASYPNALLSFSQGPRGCIGQTFAMLESQIAIAMILQRFEFRLSPSYVHAPMEAITL RPRFGLPVVLRNLQG</aaseq>

Gene Sequence

<dnaseqindica>35..314#474..697#1286..1539#1845..2226#2742..3173#atctctccactcacaaacaaagcacaagagtaagatggatgttccttctgttgtgatccccattttggttgtgctggtctcgagactcctgacaagcgccctggtgcacctgttgtggaagccctacgccatcaccaagctgttccgtgggcagggcatcacaggccccaaatacaggctcttcgtcgggtccctcccggagatcaagcgcatgaaggccgccgctgccgccgacgaggtcgccgccggcgcccactcccacgacttcatccccatcgtgctgccccagcacagcaaatgggccacagatcacggtacgtacgcatatgcttcttccggccagtgatccctcagctaattaagttcatcatcatatcgatctgtgtagtactccttaattattcagtgacctttcaatcgatgagtgatgtgatgtgatccggccacgtatgtactatgtatgtatggcacagggaagacgtttctttactggcttggcgctgtgccggccgtcagcctcggcagggtggagcaggtgaagcaggtgctgttggagaggacggggtccttcacgaagaactacatgaacgcgaacctggaggcgctgctgggcaagggcctcatcctggccaacggcgaggattgggagcgccatcgcaaggttgtgcacccagcgttcaaccacgacaagctcaaggttaattagttactccctccatccaaaaatataatcatttttagcataataacaagtcaaatatttttaattttgaccattaatagtaaaaaaacttaaaaagatcaatcatataaaataatcatataaaattgatatttactagatttatcattaaacaacctatcataatatgaaactctttttatttaaaacatcataattttatagatattattagtcaaagtagcatctcggagactgtgtcagaatccaaaaatacttatattttaggacagataaagtaattctagctcgatcaactgcgtgttgtgtgttactgtcttcttcaaaccacgtaattagtcttctttctttttcaccgctttccttttttttttcatcaatatacacctaaaactaatagcacaaaaggttatatatagccgatttaaatttagatttaaatatttttatacaaagagagtgtttctatacataatatgcgtgtcgagtttacaatatatatatttattatatttctatatctgacatgttaattagccctgaattagaggatcatatatatcttttgtgtcgatctctcagttcatgtctgtggtcatggcggaaagcgtggagtcgatggtccagcgctggcaatcacagatacagcaagctggaaataaccaggttgaattagacctaagcagagagttgtcagagcttacttctgatgtgatcacccgctcggccttcggtagcagccacgaggagggcaaagaggtctaccaagcacagaaagagctccaagaactggccttctcatcatcattagatgtgccagctctggtttttctaaggtactaaatactcttttcttgccacctaatacatcagttcttatttcttcattcgtaaactacaactaatatatacttcctccgtttcacaatataagtcattttagcatttcccacatttatattgatgttaatgaatctagatagatatatatgtctagatttgatgtgttaatgaatctagatagatatatatgtctagattcattaacatcaatataaatgtggaaaatggtagaatgacttatattatgaaacggagcgagtaattttgtttccttgatcttatggttgttcacacgcaggaaattaccaatcataagggggaacacacgagctcatcagctcgtcaagaaatcgaggaccatgctcatggagataatcgaaggacggcttgccaaagtcgaagctgccgaagccggctatggcagtgatcttcttggactgatgctggaggcgcgagctctggagagggaagggaacggcctggttctcaccacccaggagatcatagacgagtgcaagaccttcttcttcgcggggcaagacactacctccaaccacctcgtctggacgatgttcctgctgagcagcaacgctcagtggcaagacaagctacgggaggaggtgctgacagtgtgtggagatgcaattccaacgcccgacatggctaacaggctgaaactggtacgttgaactttgtctgactgcgtcagggttttcaatttcgaaattggatttttttgccaggggaccgaaattatcgaaatttcgaaaatttcaaaacgaaattgcaaacctactctgagttcgttcggataacttgctgcggcaatttcttcgttctgcacgagcacgctttcaaactgctaaatgttttttatacaaaagttttttcagaaaaaatgaaataaatccattattccagtctcaattagtcatacgcctttcggtttgtctcgtttcccattccaacaaaaatcctgaatgaaccgcccaaacaatcttttttttttaggaaacaacaggagaggctcctaccctactataaaaaaaaagatatttacatagttatgtgtacaaaattaaaaggagtatgcccaaacaaactcacccttcatttactccatccatctatcgattcattttaatttgttgtttttgccctcattttgcatgagaatttatcatttggccttcaggttaacatggttctcttggaatcactgaggctgtacagcccagtagtaatcataaggaggattgctggttcagatatcgatcttggcaacctaaaaattcccaagggaactgtgctttccataccgatcgccaagatacaccgggacagggatgtatggggacccgatgccgacgagttcaaccctgcaaggttcaagaatggcgtgtcgagagccgcgagctacccaaacgcgctgctgtccttctcacagggtccaagaggttgcatcggccagaccttcgcgatgctagagtcgcagatcgcgatcgccatgatcctccagaggttcgagtttaggctgtctccatcgtacgttcatgctcccatggaggcgatcaccttgaggcccaggtttggacttcctgttgtcctaaggaatctccagggatgagatggaccgtacgtactattatatattatacagtgtgtcgatctctacggttcgtgccttcattatatatttgcgcaattttcctttatttatcctacggaaaaggtaatgagtg</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0349800, RefSeq:Os01g0349800