Os01g0577300

From RiceWiki
Revision as of 18:53, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os01g0577300

Description

Similar to Transcriptional activator Rb homolog (Fragment)

Version

NM_001049927.2 GI:297597058 GeneID:4323850

Length

2155 bp

Definition

Oryza sativa Japonica Group Os01g0577300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:23982062..23984216

Sequence Coding Region

23982062..23982394,23982530..23982922,23984145..23984216

Expression

GEO Profiles:Os01g0577300

Genome Context

<gbrowseImage1> name=NC_008394:23982062..23984216 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:23982062..23984216 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagatcgacgacgatgtgatctacagcctgatcaggaactgggataacgacagcagcagcagctggatcgagctcctggaccacgccattgtctctcccgcctcgtgctttgtgccttggaagagaacggagctggacaaggaggcggtggccggcggggaggcggcgcagaggttgctgaagaaagtcgtgggcggcggcggcgcatggatgaatcgtgccgctggtagctgcagcatcaagaaccatgtcatgtccgagagaaggcgccgggagaagctgaatgagatgttcctcattctcaaatcactggtcccgtccatcgacaaggtggacaaagcatccatcctttcagagacgatagcctacctcaaggagctggagaggagggtgcaagagctcgagtccgggaagaaggtgtctaggccggccaagaggaagccatgctcagagacgatcatcggtggtggcggcggcggcggcggtgctggagctgttaaagagcaccaccactgggtgctctccgagtcccaggagggcaccccaagcgacgtgcgtgtgatcgtcatggacaaggatgagctgcacctcgaggtgcagtgtcggtggaaggagctgatgatgacaagggtgttcgacgccatcaagagcctccgtcttgatgttgtctcggtgcaggcgtcggcaccggatggtcttctcggactgaagatacgagctaagtatgccagttctgccgccgtggtgcctgcgatgatcagtgaaactctccggacagccgtagcaggctactaa</cdnaseq>

Protein Sequence

<aaseq>MEIDDDVIYSLIRNWDNDSSSSWIELLDHAIVSPASCFVPWKRT ELDKEAVAGGEAAQRLLKKVVGGGGAWMNRAAGSCSIKNHVMSERRRREKLNEMFLIL KSLVPSIDKVDKASILSETIAYLKELERRVQELESGKKVSRPAKRKPCSETIIGGGGG GGGAGAVKEHHHWVLSESQEGTPSDVRVIVMDKDELHLEVQCRWKELMMTRVFDAIKS LRLDVVSVQASAPDGLLGLKIRAKYASSAAVVPAMISETLRTAVAGY</aaseq>

Gene Sequence

<dnaseqindica>1..333#469..861#2084..2155#atggagatcgacgacgatgtgatctacagcctgatcaggaactgggataacgacagcagcagcagctggatcgagctcctggaccacgccattgtctctcccgcctcgtgctttgtgccttggaagagaacggagctggacaaggaggcggtggccggcggggaggcggcgcagaggttgctgaagaaagtcgtgggcggcggcggcgcatggatgaatcgtgccgctggtagctgcagcatcaagaaccatgtcatgtccgagagaaggcgccgggagaagctgaatgagatgttcctcattctcaaatcactggtcccgtccatcgacaaggtagctacctagcttactgcttaataatttataagtagtagaccaacttgtcattgatatttcatgatgaaattcaagttacttttatatactcattactatgtactgacataactgttacttatttaatttcaggtggacaaagcatccatcctttcagagacgatagcctacctcaaggagctggagaggagggtgcaagagctcgagtccgggaagaaggtgtctaggccggccaagaggaagccatgctcagagacgatcatcggtggtggcggcggcggcggcggtgctggagctgttaaagagcaccaccactgggtgctctccgagtcccaggagggcaccccaagcgacgtgcgtgtgatcgtcatggacaaggatgagctgcacctcgaggtgcagtgtcggtggaaggagctgatgatgacaagggtgttcgacgccatcaagagcctccgtcttgatgttgtctcggtgcaggcgtcggcaccggatggtcttctcggactgaagatacgagctaaggtttgtctctctcactcaatagaaactccgtatgttatattattaatgctcatgtttcttaagtagtatagctagtatgccatatccataaaatttataaaaaactgagcacacatggaagagagcgagaaaaaaaaaagaaaaagagaaatgttgactctaatgtaagagctagttttatacatgctccgaggtatatagaaagatcaagcacataagtgagaggaggaaaaaaataattatggcaaatatattgtactctcgccattcaaaagtacaagtaacgcaaatacaaagaaagaattgaattaccttctccattggatcaacttgatgcatgcacgtaatgtgattggggggcttgatggtaaaggatttaaaacaaataaaatttagatgagaaagatgtactagctattgtatacatgcatgcacgcctatgaaaaattggttgtcttatattttggtacagacagagtagttagctatactataaaaatatttatgaagttgtgcatattaattaagaaaataggttatttaaatggggatggtttagatgaagaggtagttgaagaagcaaccttaaatttttataacactagaagtttagcatattttgggttggagagagtagaggacatcattttaggttctaagtttttcaaagtcggtaaatataactattctttttttcgcaagaaaaatatagaaccttgatagctagattcttctgtacaaattcaaaagataaagggcttattttagcggtaaaccaaacatactctaactattataattttactaatttttagtaatgttagaatcttttactctcaaaacaacaccaaagtttggcaattaagagtataagccaaatatatatgtttttttacctggtctaccaaactttgctaaggaccaattttgactttgctagaattttgtaaggttaaaataaaccaaccatacatatatatacctacgttcatatacccatagtttcactagcgcaatatcgtggaaactttattgtaacaaatttggctacgctgttttcttatgcttagaacttaggttttaaataatgatcacgacaaaatttaattagtttatgttgattttatggatttaaaaaagacaatcgttaatgatgctagctgtgtataaaatggagctttcattattcattgatgctagctgtgttggtattgttttgcagtatgccagttctgccgccgtggtgcctgcgatgatcagtgaaactctccggacagccgtagcaggctactaa</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0577300, RefSeq:Os01g0577300