Os01g0591000

From RiceWiki
Revision as of 18:53, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os01g0591000

Description

NAD-dependent aldehyde dehydrogenase family protein

Version

NM_001049988.1 GI:115438081 GeneID:4326375

Length

9010 bp

Definition

Oryza sativa Japonica Group Os01g0591000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:24754138..24763147

Sequence Coding Region

24754254..24754359,24760677..24760819,24760981..24761454,24761685..24761858,24761965..24762102
,24762224..24762359,24762484..24762547,24762645..24762918

Expression

GEO Profiles:Os01g0591000

Genome Context

<gbrowseImage1> name=NC_008394:24754138..24763147 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:24754138..24763147 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggcggcgaacggcggcgacagcaaggggttcgaggtgccgaagctggagatcaagttcaccaagctcttcatcaatggccgcttcgtcgacgccgtctccggcaagacattcgaaacccgtgacccgcgcaccggcgaggtcatcgccaagatcgccgaaggagacaaggccgacatcgacctcgccgtgaaggccgccagggaggccttcgaccatggcccctggccaagaatgtccggctttgcgaggggaaggatcctgcacaagttcgcggacctggtggagcagcacgtggaggagctggcggcgctggacacggtggacgccggcaagctgttcgcgatggggaagctcgtcgacatccccggcggcgcgaacctgctccggtactacgccggcgcggcggacaaggtgcacggcgagacgctcaagatggcgcggccatgccacgggtacacgctcaaggagcccgtcggcgtcgtcggccacatcgtgccgtggaactaccccaccaccatgttcttcttcaaggccagcccggcgctcgccgccggctgcaccatggtcgtcaagcccgccgagcagacccccctctccgcgctcttctacgcccacctcgccaagcttgccggcgtccccgacggcgtgctcaacgtcgtccccggcttcggccccaccgccggcgccgctatctcctcccacatggacattgacaaggtgagcttcaccggctcgacggaggtcggccggctggtgatggaggcggcggcgaagagcaacctgaagcccgtctcgctcgagctgggtggcaagtctccggtcatcgtgttcgacgacgccgacctcgacacggccgtgaacctggtccacatggcctcctacaccaacaagggtgagatctgcgtcgccggctcgcgaatctatgtccaggaggggatctacgatgcgttcgtgaagaaggcgaccgagatggccaagaaatcggtggtcggagatccgttcaacccgcgagttcatcaaggccctcagattgacaaggagcaatacgagaagatcctcaagtacatcgacatcggtaagcgcgaaggcgcgacgttggtcaccggagggaagccctgcggcgaaaacgggtactacatcgagcccaccatcttcacggacgtcaaggaagaaatgtcgatcgcgcaagaggaaatcttcgggccggtgatggccctcatgaaattcaagacggttgaggaggcgatccagaaggcgaacagcacccggtacggcctggctgccggcatagtcaccaagaacatcgacgtcgcgaacacggtttcgcggtcgatccgggcaggggcaatctggatcaattgctacctcggcttcgaccccgacgtgccgttcggggggtacaagatgagcggcttcggcaaggacatgggcatggacgcccttgagaagtacctccacaccaaggcggtggtcacccctctctacaacaccccttggctatga</cdnaseq>

Protein Sequence

<aaseq>MAAANGGDSKGFEVPKLEIKFTKLFINGRFVDAVSGKTFETRDP RTGEVIAKIAEGDKADIDLAVKAAREAFDHGPWPRMSGFARGRILHKFADLVEQHVEE LAALDTVDAGKLFAMGKLVDIPGGANLLRYYAGAADKVHGETLKMARPCHGYTLKEPV GVVGHIVPWNYPTTMFFFKASPALAAGCTMVVKPAEQTPLSALFYAHLAKLAGVPDGV LNVVPGFGPTAGAAISSHMDIDKVSFTGSTEVGRLVMEAAAKSNLKPVSLELGGKSPV IVFDDADLDTAVNLVHMASYTNKGEICVAGSRIYVQEGIYDAFVKKATEMAKKSVVGD PFNPRVHQGPQIDKEQYEKILKYIDIGKREGATLVTGGKPCGENGYYIEPTIFTDVKE EMSIAQEEIFGPVMALMKFKTVEEAIQKANSTRYGLAAGIVTKNIDVANTVSRSIRAG AIWINCYLGFDPDVPFGGYKMSGFGKDMGMDALEKYLHTKAVVTPLYNTPWL</aaseq>

Gene Sequence

<dnaseqindica>117..222#6540..6682#6844..7317#7548..7721#7828..7965#8087..8222#8347..8410#8508..8781#atccctccctttaaaaaagggcgcatcatctctaaactcccctccacatctccaaacttccaatttctctctccacatctctctgtgtttcttttatttctcctctgctcgcggcgatggcggcggcgaacggcggcgacagcaaggggttcgaggtgccgaagctggagatcaagttcaccaagctcttcatcaatggccgcttcgtcgacgccgtctccggtacgtcgctgcgtgcttcctaattaatcctccctcttgcatctttcaccttttttttaattattattcttctcctgatgctttttttgactcacgaaagttagcaacaagaagcatctgttagtacttctgtttctttattgtttgcaactttctttttttactatctccgtttcgtattagaaattaacataaacttctttaagtttaacaatttttttaaagaaatagcaacatttagaacacaaaacaaacgcaatattaaaatatattaaatattggtttagatgaaactaatttagcgttgtaaacgttgctaatatttttaataaacctgaacaaactcaaaagtttgattagaaaaaaaatcaaaacgaaaacagagacggatatagagtattgattagtcacaatacgtgcgacaccctgcgcttttaacaccaagttagataaatgtgatagccgagtagtatctatagcgtgttaagaagtgcgggacgtcatagtacgcaagtgagggtgatttatcgtgtaaaaaagatagaagaaaccgaatgtgaggatgagacaatggtagtatggtatctagatttaagcattgcttcggagaatttgtttactgaatgaatgcatgagtttcaccgaattttcgaataaataggtataattcctgtaaagttcattaaaaaaaaacctctattccaaaagaggcttaaaatattactaccaaatatgcatatttaaatgcatgttgcatggtccaccctgttccatgtggaggtaaatcaaatgaggcctaatatattaattactactactggacaacttgctagttatggggcttagctagggatcaagtcaaatattccaggattgtgccaatgctgaagacaactttggacacgggcatctttgggatatatcaaaaaaattaactgatattggttgtttgattgtgtggttgtgagaaacaagagctaaacctgcttacatgttaggtacttccaaacagaagttgtgccatgccatcactctatatttttttcgttttgaaagatccatcactgatcaaaacagcagaaattatggaagcctctttttgaccaagatctagcttttttaaacaaacgcaagaagatgatcaaacacaccacacacatttctacatacatctcatcaccaaagatcttgagcggatgggtacgtatagaacacgtcatcaacccccccccccccccccaaacatctcactttcaagaagatattgctcgagagaaacacacgtcatggagagctgaaagtggatgtacttccaagagagcgagaacactacagctgcatattgcgtgtgaaagactgaaaatctgaaactgtagagcctgaagaaggggggaaaagaaaaacagagtgtcgactccgtgtgaaactctgaactgaagttattttttttttcgccgggaaggccgaaggaggccaaccgagtatattaagaaggaataaaagttacaagagaaaaaacatcaaaatacaccaaggtgcattgccacacaccacacgctaccacccaagcacaaaccgctgagggtgaaacctagcaccaaacgacccccgctaggcctacggcaacaccacagagacgaggctccgaaaacgatgccaccatggtggtcacgacatctaggatgccgccatcgcccatctaaaaagatctggttttcacccagagaagctcgccaagaaagggggagggtaaccctcgacaacgctccaaggagattacgacgtccgaagacgtagccgctgccggtccggtgaaccaccggactaggctttcgcctgggaccctacaaccttgactgcagatcgccatccaccaactcagaaccaccacacagacaaatggcagcacgtggcatccaccataccgcaccgatgcccctccgtcggtcgacttcaacgaaccaccacccctgaaagctggcccaggactcctccgttccaccacccgccggccgcctcgccagatttggccgaaggagaacccgggactaggtggcattgcttcggcagcctgagcttcccccactgacgagctgccgcctcaatccaacctagaaactccccgcaaagaaggggaggagctccatgaaggctgagggtgccgaccggcaacgaggaagacgacccaccaccgccaactccctttgctctgccatctggccgccggtggtgctgctgctccagaccggcaccacccgccggcgcccccgaagtccagccgtcgctcctcccctagccaccgcgacggcatcccggctgcctggcccccacgccgagccgccaccgaggcctggacgacccaccgcgccatgggctggcgccgggcgaccaggccgagcgagtgagcgggggtgcccctgccgctccgggcaggctgcgctgcccgccgcctccgcgacccggccggccacgacgagccgcggccatccgccgcccgcgcctgccgctgacgagccgcctccacgtcgagccgcagtcgtccgccgcctccgcgcccgtgccgggccggcctagccgcagccggccgccgcctcgccgccttgccgccggccgccaccacgaccgcatgtcgtcgcgccgccccaggcctcctcgcgccgccgccgcgcagatccaggcgagggagggccggatccggccatgggggctccggatccgccgcctcctcccctcctcgccgccgtagctgccatggaccacgccggcggggagcttcgtcgtcttcgactcttcgtccttcgcgcagagaagggagacgctacgaagagaagaaggcctcgccgccgccttccctgcctgctaccggcttcgccgccggcgggctccagcggcggcgaggtagggggagggagggagagaaggcgcgggtggctagggtttttgcgcccccgagccgcccgacacgaaagctatgcgcgggggagggggggctgaactgaagttaggaaattaacaacagagggtgtgtttagttcacgctaaaattagaagttttgtttaaattgaaacgatgtgacgaaaaatttgaaagtttgtgtatgtaggaaagttttgatgtgatgaaaaagttaaaagtttgaagaaaaagtttggaactaaactcggccagaatttccaggcgtcactgcctgtagctttgtattaaattttagatgaaatcaattctttttttttcctgggaatgatgcgtgtgtccaagctatagcttaattagctagtggcggtgagcctatggagcgttgcgagacaggcattggcactgtgggaagaaaacgaagggtgggagagagcttgagaaggacaggcagatccacacagatggcgagatgtatccatatgaatatgatagtaatatgatgaactgtgtggcagcattgcaaaatgccacatggtaccatggagtaatatgcatcactagagctatatcatgtggcgcatcagtgtccgggagaaaaggcagggtagtgggacacatggaaaacgcggtaattttgacagtaacatactacggttttagtcaggtcaagagttgacagcacgcagctttagttagaactaagtactctccctccgttctcgaataactgacacggttaactatagaggtctcactttgattacaaattacttttaaataattatattatgaatttatgaagtatattttcaagtgtttattaaatttctgtaaaaggacgagcggtcaaaagtttaaaattatatagtggcagcgtaaattatttgagaatgggtggattattttctggtctctattggtcgtagtagaagcaatatgagccgttgatttacaagggtcttatcctattttacgggacagttataccaggcaatgtctaagttcaatgtatgtgcaacgatcagtgcacatatatatacacacacacgagtgatgaatcctgttgactgttgagactgagctgttcggtatctagcgttttcaggggcttaattaggtttatttttcataaagcatccgtacattttctttcttttcttttcttttcaataaattagacacggccgggccgtccgacccaataagtccaagcatgccactatcactatggcagataacactagcttgcaacgtcgcttatgcagacgccaataaaactggcattgttgtgctagcttttttcttaaaaaaaggaaaattgcattgttgtgctaagctaggggacgacgcctgcaaatatttcaatgcattattgtgctctgattgggctcaacactcaattacgtgttgcttttttctgaatataaattataggagtacaaattaagtacatatatatctgatcacatatttctcatatttgggtacttcgacattgaccatccatcctccataataatattatttttcgtgctagccaagtactgatttggatatataaatgatgaataggatgtttttgagcagaattcattgcctggtaatattttgcaaggaatttaaaacataggcctactttgaaatggagaaattttaaagaaatgttgcgtaaattaaattaacttctacgaaaagcgtacaaaattctttcgttcgaaaagagctgttcatcccagcgcgattagactagttcgtactactaaaggatgaagtactagtatgtagtaggttgaaagtgctttgaaattcaatgtctttattagtatttatttttatctcgcaagacatacgtgtacacaatattatgatatctctagagtaataggctcaaatgtaaaaaagttcacgtgttaattaattagcaataagaaaaatgtatgacatgtcgcccttccactttgacatcttgtcactaagtaagcatcaattatacaccccattaaattgataatgacattcaaaaagtgggattagactatattcatcaccatcataatgagcaaaccagacaagtggatggtgaaaaaaacaatgcaaatttgtcatgctgtggaaaatctacttggacctaacataaaaaagctagaggctaactgatccatccattaacattaagaaaaagacatacatatgtaaaagataaatagataattttatctgatcttccgagaaagctctagttagcctggatggttctgtatatgagagattatatatgtaatcttgagatggtgacaacctaattaattaattaattaacaagcaagcatccaggctaataaaccagtgactgctaataaaccagaagtactgtagacaatgcccattgaggtgtccctgaacaattttcaggtctgggtctgctggctctcaaacactaattaagtcagtaaaaaacaccttgtatgtcatcggagatcagataattaatctgattatggtagccgaatattatatggctctggttcgtctgcaacaataataatttggctcctaattaactctcaagtttcatgatcaaatcctggaattcatactggggatcgtccaaaatatttccttcagagtgtctgtcatgccggtgtcttcttccataattttttttagttacaagtgtttgtgtcgtggaagcaattgaaagttgttgatcagagattcagagacctgatgggtaatttatcttaagaaacatgcaaatatcagtctagctagttgattcagaatcgccatgtgtggtagctatcgtgcaagcgtgcaaatagtttagttttttaagctacgatatgttattgtcatgtgacatttggtaatcttttttttttcaatgattttcttcgaaactagacaaccagtagttagacgtcaacgctttggtttttaattgcaactagaatataaataaattaatttactaataatgagggtcctgtatatagtataaattatttcccttgcttgttacgtgtgcaattaagtataaataaagtagctagatgcattattatcgatccacattatccacttgggtagtaaggctacttctcagttctcacaagtgtactacatgcgactatgtgagaatctctgaatattattgtccctttccctctagtcaaacccttgttttacaatttattcttacaatttgtgttcagaatactaatttaatagggctaccataatatgtacttttagcacttttttcctttaaaagtacaatagtatatatcgatatatacgaccatatcagttgacaagttatttttgctcttttaaaatacaataagatgttctattatacaatcatacgggttaacggatcttttccctttatttgcaggcaagacattcgaaacccgtgacccgcgcaccggcgaggtcatcgccaagatcgccgaaggagacaaggccgacatcgacctcgccgtgaaggccgccagggaggccttcgaccatggcccctggccaagaatgtccggctttgtaagcgcgcctctctccaccatcgcccgaaacccgtaaacgggttggatccaaacccgttagttaataataccaggcggcccatctagttataccgcactaattgggcctaattaagcccagcttaactttgaatttttggcgccaattaatggctgcaggcgaggggaaggatcctgcacaagttcgcggacctggtggagcagcacgtggaggagctggcggcgctggacacggtggacgccggcaagctgttcgcgatggggaagctcgtcgacatccccggcggcgcgaacctgctccggtactacgccggcgcggcggacaaggtgcacggcgagacgctcaagatggcgcggccatgccacgggtacacgctcaaggagcccgtcggcgtcgtcggccacatcgtgccgtggaactaccccaccaccatgttcttcttcaaggccagcccggcgctcgccgccggctgcaccatggtcgtcaagcccgccgagcagacccccctctccgcgctcttctacgcccacctcgccaagcttgccggcgtccccgacggcgtgctcaacgtcgtccccggcttcggccccaccgccggcgccgctatctcctcccacatggacattgacaaggtcagattacctacttgccattatgaatttctgaattccgattgattatgctttttttttagataatggattatattaacccggcctctacaccttagaaggtgtacacagcccaaaccacaatcaagagtacataagactccatctattacacgaggataccaaataaaagtttaacaaaacggttaaagaagaacaacagtctaagcctgatggttttcacttttcaggtgagcttcaccggctcgacggaggtcggccggctggtgatggaggcggcggcgaagagcaacctgaagcccgtctcgctcgagctgggtggcaagtctccggtcatcgtgttcgacgacgccgacctcgacacggccgtgaacctggtccacatggcctcctacaccaacaaggtcggcctctcaccggccatgtcgtcagaaaaccatctagctggcataagcacaacatattgtgaaaatctcatcagctttccacaacaatcctgttctgttgcagggtgagatctgcgtcgccggctcgcgaatctatgtccaggaggggatctacgatgcgttcgtgaagaaggcgaccgagatggccaagaaatcggtggtcggagatccgttcaacccgcgagttcatcaaggccctcaggtatatatatatgctagatcagtaaccatgctctgatttttcaactatacaaacttcagattcagagaaccaaagatgttcagcaagctgtaataaccacttgtgtgcaattacaacgaagattgacaaggagcaatacgagaagatcctcaagtacatcgacatcggtaagcgcgaaggcgcgacgttggtcaccggagggaagccctgcggcgaaaacgggtactacatcgagcccaccatcttcacggacgtcaaggcatgaacatgaccagtgtgctcttcactcctcagtgctaaaatatgaccagcagcattttcaaagagaacaaaaatgcacatttccaaatcgtgcgaaaaactaatagaccccttttgcgcaggaagaaatgtcgatcgcgcaagaggaaatcttcgggccggtgatggccctcatgaaattcaagtaggcatctttttctgaacatttccagcctgactaacatcacatgaacatctaactgaaagcctgaaaccactggatcctgaacatttttgcacaggacggttgaggaggcgatccagaaggcgaacagcacccggtacggcctggctgccggcatagtcaccaagaacatcgacgtcgcgaacacggtttcgcggtcgatccgggcaggggcaatctggatcaattgctacctcggcttcgaccccgacgtgccgttcggggggtacaagatgagcggcttcggcaaggacatgggcatggacgcccttgagaagtacctccacaccaaggcggtggtcacccctctctacaacaccccttggctatgatctgatgatgaacagcacagaaagattaattacagtggaaaaaaataacatttctatatatacagctgaaaggttgggttatatttgtggttagttgattgcttgtatcaaatatcaatttgtcggaataaagacagtatatttcagtttctcggtgtgtttttctttgtctgatgatctgacgtaaacccataagaaaaaggttaatgacagtatactatcaaacgct</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0591000, RefSeq:Os01g0591000